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Gene detail [Fasta]

Species Heliconius melpomene
GeneHMEL022530
PositionHE671865:150819..162560[GBrowse]
Heliconius Genome Projecthttp://agripestbase.org/hessianfly/?q=gbrowse&name=HMEL022530
sequence mRNA:
>HMEL022530-RA
CTTTAATATTCCATAACAGTAATAAAATATTAAATATCCATGAAATATTCCACAATCAAATAAAAATGTACTTAGTAATG
TATATGGCTCCAGCTTCTGTCAGATTATTAAAAATGTTTAATCTGCGTTAAACGCTATGAATTTTTAGACATAATATATG
AATATATATTATATGAAATTATGAATCTGTCTAAATGAAAATGGCCGAATGACTATTGAAAGCGGCTTGCTGTCAAAATA
TAAAAATAATTTTTATTAACGCGTATGCCATAATTTTAAGAAAATGGACAGTTTTCATGCATCGTTATTTAAAAGAAACT
GAATGAATTCCAGAAAGTTTTTCTTTGATATTCGGAAAGATATTAAGCAAAGGTCATTTACACCTTTGCAGATTGCTTCG
TGTCGTGTCTACTAAAGCACTATTTCTCGCACTGTTTACGTCTTATGATGAGTGAAGAAGGTGGCGACGACTCCTCGCCG
AGACCCAAACGTAAAATCAAGAGAGTGCTTGTGTTGTCATCCTCCTCAGATTCTGATAGCGATGAGAGCGTCGGCGTGGC
GGGGACACGAAGAAAAAGATTGAGAGTTATTAGTGATGGAGAAAGTAGTGATAGTAGTGGAAGTTCCATAATATGTTCAG
CAGTTGCACGAAGAAGAACATTACCAAAACTTCGTGATTCAGAAGCCGAGAGCGACAGCTCTGGGTGGATGAGTGACGGC
GCCAAGCTTACAGCCGGCAGTGCACCAGGCAAACCTGCATCAGGTTTTGCATCAGACAGTTCAGAGGGTAATTCTGATAA
ATGTTCAATATGTCTTTTGCGATTCAAAGATCAGCAAGTGGGAACACCAGAAACCTGTGAACATATATTCTGCTTAGATT
GCATCACAGAGTGGTCAAAAAATGTCAATACATGTCCAGTTGATAGAATTACTTTTAATAAAATAATAGTAAAAGCATGT
GCAGGAGGTAGAGTCCTACGTACTGAAGAAGTGAAAGTAGTGGAGAGAAGTCCTTCTATTGAAATTCTCGTCACAGAAGA
TCTAACTGTGTGTGAGATATGTGGCAACAGTGACAATGAGGAAACCATGTTGTTATGTGATGGTTGTGACCTTGGCTACC
ACATGCAGTGTCTCACACCCCCACTTACAGAGGTGCCTGCAGATCAATGGCTCTGTTCTAGCTGTACCACATCTCTTGAC
CCAGACAGTCTGATGAATGTCATTGAACTGTCTGAAGTGGAGGACTTGTTAAATGACATAGACTACAGAGACTCACCGCT
TGGACCCAGGCCTTCAGTGTGGCGACAGCCAAGAAATATCCGCAGATCCTCAAGAACTGTCAATAGAGATCAACCATCTA
CTTCTAGTGGGAGTCAAAGCAATAATGTGAATATTAATGAATTATCCACAACATCTACACGTACTGGGAGTACACGAAGA
TTAACCACTACCACGACAAGACGCAAAACCACAAATAAACGTAGGAAATATAAAAGACGAAAAACTAAAACGGTCATTAT
TGAATATGAAGTGCAAGAGAATGGGAAATTTCCCATCACAAAAAGAGTGAAGAGAAAAGTGAGGAGAAGAGTAAAAAAGC
GACAACCAAGAACTGCCGCTCGTCGGTCACACGTTCGTGCTAGCGTCCGTGCCAAGCTAGCTTCTCTTAAAGGAGATGTG
GCTGAAGGCACAAGTATAAGCGTAGGTATGTGCGAAGTTGGCGTTGTACGCCGTCCTCGTGCGGTTTTGCCTGCATTACG
TCTGTTCGGAAATCCCAACGAGCTGGACTACTTCACCGACGAGGACACGCCCGTCTCTGAGGAGGCCTCCACTGCAGTTG
CCGTCGCCGCACGGCCCACCTCCAACATACTAAGTGCTTATAGACAGGCTAGAAGAAAAATGGTAACGATTCCGTCCCCG
CCGCACGCGTCGTCGGCGCCGGACATTCTATCGAATATTCTGGAGAGTCAAACTTTGTTGCATTCAAAACAATCTATCAT
ATCCATCTCGGTCGATGGAAATGTTGACTATAAGCTAACAACTTCGAATACGAACGTTCAGCGGAAAAAGAAGCCTGCGC
CCCTCGAAAAGAAAGATGACAAAGTGGACTTGTCGAAGGTTCAGGAAACGGTCAGAAGTGTTCCGTCGTACGGCGGGCAG
GGCCGCGGCGGTGGCGGCTGGGGCGGCGGCTACCGCGGGAACTACCACCGCGACCAGGGCGCATTCCGCGGCGGCTATCA
AGCGCACCGCGCGCCGCAACAGGGCGGCGCGGCGGGTGGTGCGGGCGCCCGCGACCACGGCGACCACTACGACCACTACC
CGCGCCGCCAGCACCACTACCCCGCCGACGACAACTACTACGAGCGCCGCCGCCCCGCGCACCCCTATGCCGGCCACCAG
CGCGCGGTTCCGGGCGGTGGGGGACAGTCGTGGCAGCCCCCGGTTCTGAGAAACGACGTGCCTCCCGCTCAATCTCGACA
TTCCTTCGGCGGCTTCGAAAACCCGGTGGACATGAGGATGGGCCAGATGCGTCCCCATGCGGCCGGTCCCCGCCATGACG
CACACCCGCCCCAGACGTACCGCCCGATGAGCGAACCACCTGTATTCAATTTCCAGAAAACAGATATAGACAAATCCGAG
GATGAGAAGAGTGATTCAGGCCTCATCATTGATACTGAAAAGTACGATCCAATGGAACCTACCAACGATGACAGCGGTGA
CGATGAAGAAGCGCCATCGGCGTCCCCGTCAGCCCCGGTGTCGACGGACGCGCCGCCCTCACCGCCGCTCAGCGAGGTCC
CCTCGCCACCCCCCGCGCCGCCTTCGCAGCCCCCCGCGCAGCCATCACCGCCGCCCGCGTTGCACCCGTTGCTGGCCGGC
ATCGACGCGGGCGCGATGAACGTGCCGCCCAACATACTGGACACTGCAGTGAGACAAGTTTTGAAGGAACATAGGAATTT
GTTGTCCTCTCCTGTTGTGGAATCACGCAACGAACGAAGCGACGACGACTCAGACGGCGATTGTCCGAATTTTTCAATCT
ATTCCGCAACAAGTGTCCATATTGCAAACAACACAAGCACTTTAACTGACGATATTCCTAAACAGTTACCTCAGGACAAT
TTAGAGGACTTAGTACAAGAGGACGACGACACGCCGCCCTCGACCTCCCCTGTAGTACACGATATTGCCAATGATGACAG
ATCTAACAACTGTAAACCGCCGGCCAAGCAACACCACACAAGTACCTACGACATCAATGAAAGGAAGAAAACAGAGAAAG
AGTACAAAGAAAAGATATCGAAAAGATGTCCGATCACTACAAACACTCGCAACCCCATTAAAATTAAACTTAATACACCA
TCCTTGATAAAGAGACAGGTGAGCTTGTACGATGAGGAAGACAAAAGCCCAGACGAAGCGGATTACGAAAAAACAGAGCC
GTCGCCTGAAGTTAACGACGAAAAGTGGAACTGTAACGTGACCAGTCCAAAGTGTGATTCTGGAAAAACAGCAGATCGAT
ACGACGCCAAAGTTAAGTCGGCGGCGACCGACGTGCCGCCTGAAGTTGTACAGAGTCCGAATAAACATCATATGAATGAA
AAAAATACAGCAACACAAGATAATATTTTTATTGAAGCTCTTTCTATTGTTACTGTAAATAAGGAAAAAGAGAATGTAGA
AAAAGGTTCTGAAGACAATGAGGACAATGTAAGAGAATTTATAGATAATAATTTTGTAAAAGATACGGCTGAAGAAGACC
TTTCTGATCTTAATGAAGATTTACACGACCACGCCGACGTCGATACACCGGAGACCGATATGGCTCTAGATATTCCTTCT
CCCAAAAACGGTCCAGACTCCGTTCGAACCGAAGACAATGTTGAAAAAATGACAGAATCTATAAGCGAAACCGAAGACGA
GCGCAGCTACACCCCGTGCCTTGACGAGAACAGATCTGTTAAAGACGCTTCCTTTGACGTTGACAAAGACAAGGGACTAG
AGGGTCTGGGCACGGAGATGATATCTGAGGAAGAAGGAAACGAAATGTTTTCCGAGAACGAGCGACCTCCGTCAGAGGCC
TCGCGTGTATCTCCGCCGCGTGCGCTTCCCAGCGAGGACGGGGAGATCGCAGACAAGAGGAAAGAAGGCAAGAAGTCCGT
CGTCCGCGAAGACTCCAAGAAGAAGAAAAAAAAAGACTCCAAAAAGGATGGTAAGGAGAAGAGCAAGAACAAGAAGAAAG
GGGAAGTGTCTTTTAAAAAACTTAGCAAAAGTGGTAAGGAGAGGAATTATCGGGAAAGAGACAAGGATGAGAAGAAGAGC
GAGCGCGAACGACGCGACTCCGGCGACGACAGCCGCAACCGACGACGCAAGGAGAAGCGGAAAGACCTCGAGCGGTACGA
CGTCAGGACCGTCGTCACCGAGAAACGCAGGAAGCAGAAGGATCCTTTCGGCAGAGACATCTCCCCGCGCGGACGCTCCC
CTTCCCTCTCTCCTCCCCTGCGCTCCCCTTCTCGTCGTCGCTCTCATTCTCCCCCTCGTCGTCGCTCCCCATCCCCCGCA
CGTCGTCGCTCCCCATCCCCCGCACGTCGTCGCTCCCCATCCCCCGCACGACGTAGCTCCCTCTCCCGTCATCGTTCCCC
GTCCCCTTCTCGTCGCCGCTCCCTTTCCCGCCGTCGTTCTCCTTCTGTTCGCCGCCGCTCACTCTCGC
PEP:
>HMEL022530-PA
MMSEEGGDDSSPRPKRKIKRVLVLSSSSDSDSDESVGVAGTRRKRLRVISDGESSDSSGSSIICSAVARRRTLPKLRDSE
AESDSSGWMSDGAKLTAGSAPGKPASGFASDSSEGNSDKCSICLLRFKDQQVGTPETCEHIFCLDCITEWSKNVNTCPVD
RITFNKIIVKACAGGRVLRTEEVKVVERSPSIEILVTEDLTVCEICGNSDNEETMLLCDGCDLGYHMQCLTPPLTEVPAD
QWLCSSCTTSLDPDSLMNVIELSEVEDLLNDIDYRDSPLGPRPSVWRQPRNIRRSSRTVNRDQPSTSSGSQSNNVNINEL
STTSTRTGSTRRLTTTTTRRKTTNKRRKYKRRKTKTVIIEYEVQENGKFPITKRVKRKVRRRVKKRQPRTAARRSHVRAS
VRAKLASLKGDVAEGTSISVGMCEVGVVRRPRAVLPALRLFGNPNELDYFTDEDTPVSEEASTAVAVAARPTSNILSAYR
QARRKMVTIPSPPHASSAPDILSNILESQTLLHSKQSIISISVDGNVDYKLTTSNTNVQRKKKPAPLEKKDDKVDLSKVQ
ETVRSVPSYGGQGRGGGGWGGGYRGNYHRDQGAFRGGYQAHRAPQQGGAAGGAGARDHGDHYDHYPRRQHHYPADDNYYE
RRRPAHPYAGHQRAVPGGGGQSWQPPVLRNDVPPAQSRHSFGGFENPVDMRMGQMRPHAAGPRHDAHPPQTYRPMSEPPV
FNFQKTDIDKSEDEKSDSGLIIDTEKYDPMEPTNDDSGDDEEAPSASPSAPVSTDAPPSPPLSEVPSPPPAPPSQPPAQP
SPPPALHPLLAGIDAGAMNVPPNILDTAVRQVLKEHRNLLSSPVVESRNERSDDDSDGDCPNFSIYSATSVHIANNTSTL
TDDIPKQLPQDNLEDLVQEDDDTPPSTSPVVHDIANDDRSNNCKPPAKQHHTSTYDINERKKTEKEYKEKISKRCPITTN
TRNPIKIKLNTPSLIKRQVSLYDEEDKSPDEADYEKTEPSPEVNDEKWNCNVTSPKCDSGKTADRYDAKVKSAATDVPPE
VVQSPNKHHMNEKNTATQDNIFIEALSIVTVNKEKENVEKGSEDNEDNVREFIDNNFVKDTAEEDLSDLNEDLHDHADVD
TPETDMALDIPSPKNGPDSVRTEDNVEKMTESISETEDERSYTPCLDENRSVKDASFDVDKDKGLEGLGTEMISEEEGNE
MFSENERPPSEASRVSPPRALPSEDGEIADKRKEGKKSVVREDSKKKKKKDSKKDGKEKSKNKKKGEVSFKKLSKSGKER
NYRERDKDEKKSERERRDSGDDSRNRRRKEKRKDLERYDVRTVVTEKRRKQKDPFGRDISPRGRSPSLSPPLRSPSRRRS
HSPPRRRSPSPARRRSPSPARRRSPSPARRSSLSRHRSPSPSRRRSLSRRRSPSVRRRSLS
Swiss-ProtPHD and RING finger domain-containing protein 1
KEGG     K17586     
SUPERFAMILYSSF57850  RING/U-box superfamily     
Gene3DG3DSA:3.30.40.10     
PfamPF00628  PHD; PHD-finger     
SMARTSM00184     
ProSiteProfilesPS50089  ZF_RING_2; Zinc finger RING-type profile.     
CoilsCoil
ProSitePatternsPS01359  ZF_PHD_1; Zinc finger PHD-type signature.     

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