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Gene detail [Fasta]

Species Tribolium castaneum
GeneTCOGS2:TC001102
PositionChLG2:13532488..13597715[GBrowse]
sequence mRNA:
>TCOGS2:TC001102-RA
ATGAAGAGAGTATCGTTTCTTGGTACTAAATCTGAATATGTTTATTTAATGTTGTTGAAACGTGACGATCCGCCTCTGGT
TGGTTGGTTAGGTGTTTTGAGACGGCGCGATCTTGATTGGACTCTCACTAGGACACTGCACCCTCTCCACGGTGCCATGA
AACGCGACAAAGACCCAGACCGACGAGACGTCATGAAGAAGTTCACGTTTAAAGGCGTTCTGGAGAACTTCCGCACCTCC
GTGGCGCAGCAAGTCAAGCCCGACCAGGAAATCCAAGAGACTTTGCGGCCAGAAAACTTCCAAGTCAAGAGGACGTTCCG
CCATGGCTTCCCTTTTCAACCCACGGCGATGGCGTACGACCCTGTGCAGCGATTACTGGCGATCGGTTCAAAATGTGGCT
CCCTCAGGATACTCGGCCAACCAGGCGTCGACATTCACGTCCGACACGACATCGATGGTTCTCCAGGGTCTTCAGCCGTC
CTTCATTTGCAGTTTCTTGTTAATGAGGGCGCTTTAGTTTCCGCAACGGCAGATGACTCGCTACACCTCTGGAATTTCAG
GCAGAAAGTTCCGCAGATTGTTCAGAGTCTCAAGTTTCAAAAGGAAAAGATTACCTGCATGCATCTACCATTACAATCTA
AATGGCTTTACGTGGGAACTGAACGTGGCAATGTCCATGTGGTCCACATAGAAACCTTCGCTTTGTCGGGATACGTCATT
AACTGGAACAAAGCGATAGAAGTTTCTCGAAAGACTCATCCCGGCGCTCTAGTCCATTTAAGTGATAACCCTTTAGATGC
TAGTAAGTTATTGATAGGCTATGAAAGCGGTCAGGTTGTTCTTTGGGATTTGAGGAACAAATCGGCTGAAATGCGATGGC
AAACTGCCGAATTAAAAAGTGTAGCGTGGCACCATGAAGGCAAACAGTTCATGTGCTCGCATGCCGATGGAACATTAACG
ACATGGAGTATTAAAGATAGGACGAAATATCTTTGTATATCGCAGCCGCATGCGAAACTTAACAAAGATGGCAAGGCGGA
ACAATGTAAACCCATAAATAAGGTTGAATGGAAGTCATCAAGGACGGGAGAAGCATATGTGATATTTTCGGGTGGAATGC
CTTACGACCAAGCCGGCAGGACACCTAGCATAACTGTTGTACATAATAAAACTACCACTGTGTTAGAAATGGAAAGTAAC
GTTATTGATTTTATTACTTTGTGCGAATCTTTCTATAGTAGCGAACTGCAGGAACCTTACGCAATAATAGCTTTACTACA
GAACGACTTAGTAGTGATGGATTTACAGACGGCTGGGTTTCCCTGTTTAGAGAATCCGTATCCCATGGATATTCATGAAT
CTCCCGTGACGTGTTGCAGTTACTTAGCGGATTGTCCTGCCGATCTAATCCCGGCGTTTTACTACGTCGGGAGGGCGAGC
GGGAATAAAAGACAAGGTTTCTCCGAGATGGACTGGCCTGTTAGCGGCGGCTCCTGGTCGGCGCAGTCTTGCAGCTACAG
CGAAATTATCCTCACAGGGCACGCCGACGGCAGCATAAAGTTTTGGGATGCCAGCGCCGGCACGCTCCAGGTCCTGTACA
AGCTGAAAACGGCGAAAATTTTCGAGAAACAGCGCGCGCGGTCGTTGGATAAGGAGGAGGACCCGTTTGCCATCGAAATA
ATTTCGCTGTGTCCCGAGTCGAGGAAGCTCTGCGTCGCCGGAGCGTCGAGTCATGTGATTTTGTTCACGTATAAGAAGTC
GGAGAGTAACGACGAAGTTACTGTGTTGGAGATTCCTATAGTTTACGAAGTTCCTGAGGAAGGGGAAATTTCGCCGGATT
GCCAATTTTCCGGACCCGGATCAGCGGGATCGGATATGTTGGATTTCGACAATAAAAAAGTATTAAAAGGGTTTGAGGCG
ATTAGGTGGGTTGACGACTCTGAATTACAGGATACACCGACGCTTAAGGTTCGTGCTGGTATCCAAAAGAAACTTCCCGG
TTTTCAAGCACAATTAGTTTGTTTAACCCCTTGGAACAATGGAGAACCTCCGAGCCATATTACTGCTCTTACTATAAATA
GTTCATACGGACTGATGGCTTATGGTAACGAAGCGGGAATTGTGATAATAGATATAGAACAGAAAGTTTGCCTTTTAAAC
GTGGGCAGTCCCGACCTGTACGGTGCCCAAGACCCATACTCCAGAGTCCCGAGGAGTCCGAAGCGCGGGGGAACGGCCAG
CGACATCCTTCCGGTAAACATGGACGACAGACAGCCCCGTAGCCCTAGCATAGACCAGATGGGAAGATCCCCGGAAAGTC
CTTATTCCTTGTGCCCCTACCCCACCCCTGTCGAACAAGCTTCCGAGGCCCTAGAGGAGGACAAAGCCGTCCCGATACCC
CAAGCCGCCACGCGACGCAAGTCCTCCACTTGGAAGGGTCTTAAGAGACAGCTATCCAGAGTGGATATTAAGATTAAGAA
CCCGTTGAAAGAGAAAAGGAACTCGATCTTTTACTCGGACGTTTCGCCCGATCCTGACAATCTAGACGATATTAAATCGT
CGCCGGAATCCGATGAAAATACGGTCATCGACAATCAGAGCGTTATTGATTTGACGTTAACTCTTGGTAAAGAGGACCAA
AAGGAAGTATACGAGGAGTTTCCAGCCGAAATACAGTTCTCGCCGGGGGAGGACAGCGACACGCCTTTCGTGGTGGGCTC
GCTCGGGACCCAGTACGAAATGGGGAATAGTCGAAAAATCGGGTTTGCTCTGCGGCCTGATAATTTGGAGCTGGTGGACG
AAGACGGATGTCCGGTGCGGCCACCACGCCACGTAAAGAAAAAGATCGCTGATAAGAGAGACCAAAGACTGTTATCTGTA
CCAAATATCAAATTTCAGAAACCAGAGGTTCAGTCTCTCAAAGATCTAAGAGACAGGGAGGAGAGCGTTGTCAGCCCGCA
GCCGTCGTTTACCGGAAGTCTGATGAGGCGTTTCAACAAGCTGGATAGTTCGTTTTCAAGATCCCGGTCAAGTTCAATGA
GCTCTCTGGAAAACATCACCTCCGAAGCAATACAGTGTCTGATTTTTGCCGACTCTTTTGCGAAAAAAACAGAGCCCACA
TCACTTATACCAACCCTATGGGTCGGCACAAGTCTCGGATCTGTGCTCACTATCCTGATAACTCCGCCGGATCCGGACAG
CAGATCATCGCAGCCTGTCGTCGTTTCGCTCGTTGGCGTTACGATTTTTCGGCTGAAAGGCGCGATCTTGTCCATGTCGT
TTCTCGACTGCAACGGCTCTCTCATACCGAACGCCTACGAGTCCTGGAGGGACGACAACAGGGACAAACGAGAGAAAACC
CCAACCAAATGCCAGAACCGCATGAGTCCGACGCTGAGCGATCAGCAAAACAGAGGCGACTCGTTCAGCGACAGGCAGTA
CGTTGTGATAGTGAGCGAAAAACAGGCGAGGGTTGTGGCCCTGCCGTCACAAACATGTGTGTACCGCCAGCAATTGACCG
ATGCCGATTTTGTCGTAAAAGCCGAAGTAATTTCGCTGAAAGACAGTGTTTGCTTGCTGGGCTACATTTCGAACGGCCAT
CTCGTAGCCTACAGTCTGCCAAGTTTGCGACCTTTAATCGATATCGATTTTCTGCCTTTATCCGAACTTAGTTTCCAGAC
ACAATCTAACAAAGGCATTGTAGACCCAATGTTATCCATTTGGGGACAACAACTCATTGTTAACGAGGATACTGACCAAA
TCGCTCGAACGTTCTGCTTCAGTAATAGAGGACATGGTTTATACTTGGCTTCACCGTCTGAAATACAAAAATTCACACTG
TGTACGGAATTCTGCTCAAACTTGTCGGAAATGATGGGAGAGCTGTTCTTGCCATTAGATATGCCCGAGCCGCCGAAAGA
GGGCTTCTTCAAGGGCCTGTTCGGGGGCGGGATTCGCAGTTTAGACCGCGAGGAATTATTCGGAGAATCAAGCGGCAAGG
CGAACAAGTCCATCGCGAAGCACATCCCGGGGAGCCTGCAAGAGATGGGCACTCGTGTGACAAGTGCAACGGGCGAAGTC
AACCGGGCCCACAAACTGATGATCGAACGAGGCGAGAAACTGAGCCAGCTTGAGGACCGAGCCGAGAAAATGCGCAGCGA
AGCGGAGAACTTCCAGGCGTCGGCCCACGATCTCATGCTCAAGTACAAAGACAAGAAATGGTACCAATTGTGA
PEP:
>TCOGS2:TC001102-PA
MKRVSFLGTKSEYVYLMLLKRDDPPLVGWLGVLRRRDLDWTLTRTLHPLHGAMKRDKDPDRRDVMKKFTFKGVLENFRTS
VAQQVKPDQEIQETLRPENFQVKRTFRHGFPFQPTAMAYDPVQRLLAIGSKCGSLRILGQPGVDIHVRHDIDGSPGSSAV
LHLQFLVNEGALVSATADDSLHLWNFRQKVPQIVQSLKFQKEKITCMHLPLQSKWLYVGTERGNVHVVHIETFALSGYVI
NWNKAIEVSRKTHPGALVHLSDNPLDASKLLIGYESGQVVLWDLRNKSAEMRWQTAELKSVAWHHEGKQFMCSHADGTLT
TWSIKDRTKYLCISQPHAKLNKDGKAEQCKPINKVEWKSSRTGEAYVIFSGGMPYDQAGRTPSITVVHNKTTTVLEMESN
VIDFITLCESFYSSELQEPYAIIALLQNDLVVMDLQTAGFPCLENPYPMDIHESPVTCCSYLADCPADLIPAFYYVGRAS
GNKRQGFSEMDWPVSGGSWSAQSCSYSEIILTGHADGSIKFWDASAGTLQVLYKLKTAKIFEKQRARSLDKEEDPFAIEI
ISLCPESRKLCVAGASSHVILFTYKKSESNDEVTVLEIPIVYEVPEEGEISPDCQFSGPGSAGSDMLDFDNKKVLKGFEA
IRWVDDSELQDTPTLKVRAGIQKKLPGFQAQLVCLTPWNNGEPPSHITALTINSSYGLMAYGNEAGIVIIDIEQKVCLLN
VGSPDLYGAQDPYSRVPRSPKRGGTASDILPVNMDDRQPRSPSIDQMGRSPESPYSLCPYPTPVEQASEALEEDKAVPIP
QAATRRKSSTWKGLKRQLSRVDIKIKNPLKEKRNSIFYSDVSPDPDNLDDIKSSPESDENTVIDNQSVIDLTLTLGKEDQ
KEVYEEFPAEIQFSPGEDSDTPFVVGSLGTQYEMGNSRKIGFALRPDNLELVDEDGCPVRPPRHVKKKIADKRDQRLLSV
PNIKFQKPEVQSLKDLRDREESVVSPQPSFTGSLMRRFNKLDSSFSRSRSSSMSSLENITSEAIQCLIFADSFAKKTEPT
SLIPTLWVGTSLGSVLTILITPPDPDSRSSQPVVVSLVGVTIFRLKGAILSMSFLDCNGSLIPNAYESWRDDNRDKREKT
PTKCQNRMSPTLSDQQNRGDSFSDRQYVVIVSEKQARVVALPSQTCVYRQQLTDADFVVKAEVISLKDSVCLLGYISNGH
LVAYSLPSLRPLIDIDFLPLSELSFQTQSNKGIVDPMLSIWGQQLIVNEDTDQIARTFCFSNRGHGLYLASPSEIQKFTL
CTEFCSNLSEMMGELFLPLDMPEPPKEGFFKGLFGGGIRSLDREELFGESSGKANKSIAKHIPGSLQEMGTRVTSATGEV
NRAHKLMIERGEKLSQLEDRAEKMRSEAENFQASAHDLMLKYKDKKWYQL
Swiss-ProtSyntaxin-binding protein 5
KEGG     K08518     
SUPERFAMILYSSF50978  WD40 repeat-like superfamily     
Gene3DG3DSA:1.20.5.110     
PfamPF00957  Synaptobrevin; Synaptobrevin     
SMARTSM00320     
ProSiteProfilesPS50892  V_SNARE; v-SNARE coiled-coil homology domain profile.     
PRINTSPR00962     
CoilsCoil
ProSitePatternsPS00678  WD_REPEATS_1; Trp-Asp (WD) repeats signature.     

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