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Gene detail [Fasta]

Species Tribolium castaneum
GeneTCOGS2:TC010805
PositionChLGX:6718724..6727527[GBrowse]
sequence mRNA:
>TCOGS2:TC010805-RA
ATGCCAGAGACGGGGGAAGTATCAGATTCAGAAAATTCTGGGTCTGGATCTGACAACGAAAGCAAAAGTGATTCATCATC
AAATAACTCTGGATCAGAAAGCGATTCCGGCTCGTCTTCTTCAAGTGGATCTGATTCAGGAGGAGAAGGTGGTTCCGGCA
ACGAAAAGGCAAGTCCTCACAGCAGTTCGAACGCATCAAACAATTCACCCGATTCCAAATCCAAAAGGAAATCAGATTCG
AAAGAGTGGGATGAAAATCCCGACATTTACGGCATTCGAAGGTCGTCGCGGTCGCGTAAGGAACCAGACCGATTACAGAA
CAAAAGCGAACAGAAGAAGAGGAAGAGCGATGAGTGGAAATACAACGACGATAGTTCTTCCGAATCGGAAGAGGAGAAAG
AAATTCCACCTCCGAGCAAAAGAGTCGGAGCTAAACGTGCCACTGTGAAAAAAGCTAAAACCAAAACCAAGTACAGTTCG
GACGATTCTAGTGTTGATAGTGATGAAGATCGAAGAAGAACAGTGACAAGACGGACCGCGGGTGCTTCTGTTAGTTATAA
GGAAGAAAGTGAAGACGATAAAACTGATTCGGAGGACTTGTTAGAGGTGGAATATACTGAGACGTCTGAGCCTGTACCTG
AAGAAAAGTGTGAAACAATTGAGAAGATTTTGGGCCAAAGGAGAGGGAAGAAAGGGGTGACTGGAAACATCACAACAATG
TATTACGTAGAGGAAAACGGCGATCCCAACGAGGGAGTGGATCCGAACGACTCGGAAAGTACCGAACAACAGTATCTCAT
CAAGTGGAAGGACTGGGCGCACATACATAACACCTGGGAGTCGGAAGAGTCACTAAAGGAACAAAAAGTAAAAGGAATGA
AGAAACTGGAAAATTATATCAAGAAAGAAATCGAAATTCAGCAATGGATGAGATATGCAACTCCGGAAGACATAGAATAC
TACGAGTGTCAAATGGAGTTGTCGCAGGAGTTGCTAAAAAGCTACAACAACGTTGAGAGGATTATCGCGAAATATAATAA
ACCGGACGGTGGCACCGACTATTTCATTAAGTGGGAAAGTCTGCCTTATGCCGATTCCACGTGGGAGGACTCTGGCTTGA
TTCAGAAGAAGTGGCCGAAGAAAATAAAAGAATTCGACGATCGCGAACAATCGAAACAGACTCCAACCAAACACTGCAAA
GTCCTCAAGTACCGGCCGAAGTTCCACGAAGTGAAGACTCAACCGGAGTATATGATGGGAATCGAGAAGACTTTGGTGTT
GCGGGACTACCAAATGGACGGCCTGAACTGGTTGATTCACTCCTGGTCGAAAGAAAACTCGGTTATTTTAGCCGACGAGA
TGGGCCTGGGTAAAACAATCCAGACGATATGCTTTCTGTATTATCTCTTCAACACCTACCAATTACACGGACCGTTCCTG
TGTGTTGTGCCCTTGTCGACGATGACTTCGTGGCAGCGGGAGTTCGCGCAGTGGGCCCCCGAAATGAATTTCGTCACGTA
TTTGGGCGACGTCCAATCAAGAGATACGATCAGACAATACGAGTGGAGTTATGAAGGTTCGAAACGCCTGAAGTTCAACG
CGATCCTCACAACTTACGAGATTGTCCTCAAAGACAAAGCATTCCTTGGTAGTTTAAACTGGGCTGTGTTACTGGTTGAT
GAAGCACATAGGCTGAAGAATGATGATTCCTTGCTCTACAAGGCGCTGATGGAGTTCGACACGAATCATCGGCTGCTAAT
CACAGGGACCCCGCTCCAAAACAGTTTGAAGGAGTTATGGGCACTTCTCCACTTTATCATGCCGCAGAAGTTCCAAGCCT
GGGAGGAGTTTGAAAAGGATCACGAACACGCGTCGACGAAAGGCTACTCAAGGTTGCACAAACAACTGGAGCCTTTCATT
TTACGTAGAGTGAAAAAAGACGTTGAGAAATCGTTACCGGCAAAAGTTGAACAAATTCTTAGGGTAGAAATGACTACGCT
TCAAAAACAATACTATAAGTGGATTCTTACCAAAAACTATAACGCGTTACGTAAAGGTGTGAAAGGTTCAACCAACACCT
TTTTAAATATAGTTATAGAATTAAAAAAGTGCTGTAATCACGCGTTGTTAACGAAGCCGACGGAATACGAGTCGAATAAT
TCTCAGGAAGACCATTTGCAACTGTTGCTCCGCGGTTCCGGTAAATTAGTGCTATTGGACAAACTTTTAATACGTTTACG
TGAAACGGGTCACAGAGTGTTAATATTTTCGCAAATGGTCAGAATGTTGGACATATTAGGTGAATATTTGCAGTTGCGCC
ATTTCCCCTTTCAACGTCTGGATGGAGGCATCAAGGGCGAACTTAGGAAACAAGCACTCGATCATTTTAATGCCGAAGGA
TCTCAAGATTTCTGTTTTCTACTGTCGACGCGTGCCGGTGGTTTAGGTATTAATTTAGCTACAGCTGATACTGTGATTAT
CTTCGATTCGGACTGGAATCCACAAAATGATCTACAAGCCCAAGCAAGAGCACACAGAATCGGACAAAAGAATCAAGTCA
ATATCTACCGATTAGTCACCGCTCGATCAGTAGAAGAAGAAATCGTCGAACGTGCCAAACAAAAAATGGTCTTGGATCAT
CTAGTTATACAAAGGATGGATACAACAGGACGAACAGTATTGGACAAGAAAGGATCCTCAAACAACAATCCTTTCAACAA
GGAAGACCTCACCGCCATACTCAAATTTGGCGCTGAAGAGTTATTCAAGGACGAAGACGACAAAGACGAAGAACCAAATT
GTGATATTGACGAAATCCTCCGACGAGCAGAGACACGTGACGAAGCCCCCACTCTAGCCGGAGACGAACTTCTATCAGCC
TTCAAAGTTGCAAATTTCGCCGCTTTTGACGAAGACACCGAGCCCTCCCCAGCACCCCAGGCACCAGCAGATGACGAAAG
CAAAGACTGGGACGAAATCATCCCTGAAAAACTCCGAAAGAAGGTCGAAGAAGAAGAAAGATCCAAAGAAATGGAAGATT
TGTACCTCCCGCCTCGTTCCCGCAAAACTCTCCAACAAATCAACCAGTCCGAAAGCGACGGCGAAGACGGCAAAGGTCGC
AAGAAACGGAAGAAAGAAGAGGCGGAATCGGGTGGATCAAGCGGCGAAGGTGAAGAAAGCGACGAAGAACGGCCGCGAAA
ACGTGGCCGACCTCCGTTAGCCAATCGCGAGAGAATAAAAAATTTCACCGACGTGGAAATCAGAAGGTTTGTGAAGAGTT
ACAAGAAGTTCAGCGCGCCGTTGAAGAGGCTAGAAGCGGTGGCTTGCGACGCGGAATTGCAGGAAAAACCGTTGGCGGAG
TTGAGGAAGTTAGGGGAGCTGCTTCACGAACGCTGTAGGGCGTATATGGGTGAACACACCAAAGAAAATAACGAAAGTAC
CCAAGATGATGCTAGTCGGGGTCGGAAGAGGATGCGAGGACCTTCGTTTAAGTTAGGTGGAGTTTCAGTTAATGCCAAAA
CAATGATGGCGTGTGAAGAGGAGTTGGAGCCTTTGGACGAAGTTTTGCCTTCGAATCCGGAAGAAAGAAGCAAATGGGTG
TTGGATGCAAGGACCAAACCTGCCCATTTTGACGTCGAATGGGACAGTAACGAAGATTCCAAGTTGCTTCAAGGGATTTA
CATCTATGGAATGGGTTCATGGGAACAGATTAAGTTAGACCCAACTTTGGGAATTGGTGATAAAATTTTACTCAATGAAG
ATAAGAAGCCACAGGCTAAACATCTACAGTCCAGAGCTGAGTATTTACTAAAAATATTGAAGAAGCAACTCGACCAGAAG
AAAGGGGTTTCGAAACCGAAAAGGCAACGGAAGTCGAAAGAAACCAAAGCTTTGACTAAAGAAATTATTGATAATGATGA
TATTAGTTCAAATGAAGACACAAACATTGCTAGTTCTGCAAGCACGACTTCGTCGATTCCCAAAAAGAGCAAATCTGTAC
TTAAGAAAGAAGATGACAAGGAAATGGATGGTTCAAGCAAACATCACAGCGAGAAGAAAGACAAGAAGAAGGATAAGAAG
AAAGAGAAGAAACTTGCCGGACCGATGCATTTTACTGCTAACAATGAACCAAGGGCTTTGGATGTATTGGGCGACTTGGA
TCCTGCCATATTTAATGAGTGTAAAGAAAAAATGAGACCGGTTAAGAAAGCCCTCAAAGCATTGGATAATCCGGATCAGT
CTTTATCAGAGGCTGAACAAGTAAACCACACTAGGTTGTGTTTAATACAAATTGGGGAACAAATCACTCATTGTTTGAAT
CAGTATACTGATCCAGAAAAAATTAAAGAATGGAGAAGTAACTTGTGGTATTTTGTATCAAAATTCACTGAATTTGATTC
TAAAAAATTGTACAAATTGTATAAACGAGCCTGCAAGAAGTCGGAAAAGCTGGAAAAGAAGAACGACCCGGATGCGAGCG
GTAGCACTAGTAAAGAGAAAACAAAAAGTGAGAGTAAAGATGAACGAGAACATACGAGTAAAAGGCGTCATGAAGGTGAC
GATAAAGAAGAACGGGAATCGAAGAAACACCGTTCAGAAAAGAAAGACAAACGTGATAAGGAAGAAAAGGAAAAGAAGAA
GAAAAACCGCGACGAGCCAGAAGAAGAGGGAGAATGGTCTCGCTATGGCCGCGGTAGTCGAAAGCCGAGCTCTGGCGGTT
TTCGGCACGAGCCCATGTCCCATGCCGACCATGAAAGGTGGAGCGGGAGTCAGTCACGTGACCGTTTCCCCGAACATAAG
CGAGACAGGTTTGATTATCAAAGACAGGGTGGTTATCACAGAGAAAGGAGTGACTTTGGTCGGCCCGATAAAAGGTCTCC
CGAGGGGAAAGCAGATTGGAGGTACGCGAGGAATCCCCGCGATCTTATGCCTCCCATGGGTGGTCAGCGACCACCGGTAT
TTTACGGTCCTAACTTTCAACCAATTCCATTGTATATACCGGAACAGTTTCCAAGAGACAGGTTTTCACCTGGTGATTGG
CGTCCCTTAGATAGAGACTATAACAGACGCGAGTACGATAGGCGGCCACAATAG
PEP:
>TCOGS2:TC010805-PA
MPETGEVSDSENSGSGSDNESKSDSSSNNSGSESDSGSSSSSGSDSGGEGGSGNEKASPHSSSNASNNSPDSKSKRKSDS
KEWDENPDIYGIRRSSRSRKEPDRLQNKSEQKKRKSDEWKYNDDSSSESEEEKEIPPPSKRVGAKRATVKKAKTKTKYSS
DDSSVDSDEDRRRTVTRRTAGASVSYKEESEDDKTDSEDLLEVEYTETSEPVPEEKCETIEKILGQRRGKKGVTGNITTM
YYVEENGDPNEGVDPNDSESTEQQYLIKWKDWAHIHNTWESEESLKEQKVKGMKKLENYIKKEIEIQQWMRYATPEDIEY
YECQMELSQELLKSYNNVERIIAKYNKPDGGTDYFIKWESLPYADSTWEDSGLIQKKWPKKIKEFDDREQSKQTPTKHCK
VLKYRPKFHEVKTQPEYMMGIEKTLVLRDYQMDGLNWLIHSWSKENSVILADEMGLGKTIQTICFLYYLFNTYQLHGPFL
CVVPLSTMTSWQREFAQWAPEMNFVTYLGDVQSRDTIRQYEWSYEGSKRLKFNAILTTYEIVLKDKAFLGSLNWAVLLVD
EAHRLKNDDSLLYKALMEFDTNHRLLITGTPLQNSLKELWALLHFIMPQKFQAWEEFEKDHEHASTKGYSRLHKQLEPFI
LRRVKKDVEKSLPAKVEQILRVEMTTLQKQYYKWILTKNYNALRKGVKGSTNTFLNIVIELKKCCNHALLTKPTEYESNN
SQEDHLQLLLRGSGKLVLLDKLLIRLRETGHRVLIFSQMVRMLDILGEYLQLRHFPFQRLDGGIKGELRKQALDHFNAEG
SQDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAQARAHRIGQKNQVNIYRLVTARSVEEEIVERAKQKMVLDH
LVIQRMDTTGRTVLDKKGSSNNNPFNKEDLTAILKFGAEELFKDEDDKDEEPNCDIDEILRRAETRDEAPTLAGDELLSA
FKVANFAAFDEDTEPSPAPQAPADDESKDWDEIIPEKLRKKVEEEERSKEMEDLYLPPRSRKTLQQINQSESDGEDGKGR
KKRKKEEAESGGSSGEGEESDEERPRKRGRPPLANRERIKNFTDVEIRRFVKSYKKFSAPLKRLEAVACDAELQEKPLAE
LRKLGELLHERCRAYMGEHTKENNESTQDDASRGRKRMRGPSFKLGGVSVNAKTMMACEEELEPLDEVLPSNPEERSKWV
LDARTKPAHFDVEWDSNEDSKLLQGIYIYGMGSWEQIKLDPTLGIGDKILLNEDKKPQAKHLQSRAEYLLKILKKQLDQK
KGVSKPKRQRKSKETKALTKEIIDNDDISSNEDTNIASSASTTSSIPKKSKSVLKKEDDKEMDGSSKHHSEKKDKKKDKK
KEKKLAGPMHFTANNEPRALDVLGDLDPAIFNECKEKMRPVKKALKALDNPDQSLSEAEQVNHTRLCLIQIGEQITHCLN
QYTDPEKIKEWRSNLWYFVSKFTEFDSKKLYKLYKRACKKSEKLEKKNDPDASGSTSKEKTKSESKDEREHTSKRRHEGD
DKEERESKKHRSEKKDKRDKEEKEKKKKNRDEPEEEGEWSRYGRGSRKPSSGGFRHEPMSHADHERWSGSQSRDRFPEHK
RDRFDYQRQGGYHRERSDFGRPDKRSPEGKADWRYARNPRDLMPPMGGQRPPVFYGPNFQPIPLYIPEQFPRDRFSPGDW
RPLDRDYNRREYDRRPQ
Swiss-ProtChromodomain-helicase-DNA-binding protein 1
KEGG     K11367     
SUPERFAMILYSSF54160  Chromo domain-like superfamily     
Gene3DG3DSA:2.40.50.40     
PfamPF00385  Chromo; Chromo (CHRromatin Organisation MOdifier) domain     
SMARTSM00487     
ProSiteProfilesPS51194  HELICASE_CTER; Superfamilies 1 and 2 helicase C-terminal domain profile.     
CoilsCoil
ProSitePatternsPS00598  CHROMO_1; Chromo domain signature.     

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