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Gene detail [Fasta]

Species Dendroctonus ponderosae
GeneDPO000495
PositionSeq_1102772:817098..822818[GBrowse]
sequence mRNA:
>DPO000495-RA
ATGAGTGATAAATTTCATGAGCAAACGTGCGACTTTAAGGTTGGCCAGTCGACTTTCTATGGCACCCCGGTGAATTTGGG
CGACGAGCCTCTTACGCAGGATCTGAGCCCTGCAGAGAAGCAGGATTCAATGAAGCTCGACCACAATGTGGATCAGGACT
GTACGATATTTTCTGGAATCACGTATTTGGGCGCCGCGCAAATAAACGCTCCCAAATCGGAGGTGGAAATCCACCGCAAT
ATGGCCATATTGAACGAGCAAAGCGTTGAGCAAGGAATTAAAGTTGCAGTGTCTGTTCCGTTATCTAGTCAAGGCCTGGT
TGTACTGTACGACGGCCAAACCAATTCAGTAATATCTAGATATGAAGTGCATCGAATCCTGTTTTACGCCAGAGGTTCGG
TGGATAGTAACGAAGCTGGCTGCTTCTCATTCACATGGTCGCATGGCGATTCACAGGAATCCGCTATTTTTCTTTGCCAT
GTGTTCCGTTGCGATATAGTGGAGGCGGTGTCTAGAGTTTCCGCCTGTTTTGCTAAAGCATTCCAACGCGCCCCCAAGTC
GATGAGCAGCAGCGTAACATCCGCTTCAGATATGATGTGCGGGTCAATCACAGCACTGCCTGAGCCCAGAACTCTAATGT
ATGTGTTTGAAGTCAATTTGGAAATCAAGGAGGAAGACGGCAAGGGTTCGTACTCGACGGTGGGTAAAGATCGCAACGGC
TTTAGACTGAAGACGAATATATTAAAGCAGCTACTAATCAGTATTAAACAAGTGTCCGACAATGGGCCCCATTTGGTCAT
CGAGCGGTGCTTTGGAGTCCTGATCGCTTCCGGACGGCACGTCAGACATTCCGATATGCGACTCCTGGAAAGGAACGAGC
AAAAGAATCACTCAACTGAGAACAATTGCACCTCAATAATCGCCATGTGGGACCCAACAGAGCAGAACTTCGAGCCTCTA
AACGCTGAGACCCAAAAGGACACCAAACAGTACATGACAGTGGGCATTGACTTGGTTATTAGGGGAATTCAAGAGCCAGT
CAGGTTTGTGATTGAAACGCCCGTTAGAATTTTCGGGCAGAGCGAAAGAAACTTCTGGTACTTTCAAAAGAAAACCTTAA
TCCAGCAGTTTTACTTGAATCTCAGAGAGACGATCAGCAGCGATCTTAGCGAAGTGAAATACGAAGTTCTCAACATGGAG
ACTTCTGGAGAGTTGGACAGAAATTTGCTGAATCTCAACTTGAACCTGTCGAGTTTAATTCAATCGCCCAGTATTACATC
AATCGACACGTTGACTCCGAAAGAAGAATATCACTCAGATGGGGACGAACCGCTGCTTAGCGGCACTGGCCTGGTTTCGA
AAGATTGTTCGGAAGTCGTGCTGGAATCGTGGGCCGATCTGCTCACAAAGTGGAAGCAAACCGATCAACGCCCCAAACAA
TTGGCCAGCTTAGTGAAACTGGGGATTCCTGAGGCTCTGAGGGGCGAAGTTTGGCAGCGATTAGCCGGAGTCCAAGAGAA
CAGCGAGATGATGAATATGTATAGAGTTTTAATCACAAAGGAGTCCTCATGTGAAAACGTCATCCAACGGGATATTGCCC
GGACTTTTCCGGCTCATGATTTCTTTAAAGAAGCCGGAGGCCTCGGACAGGACTCGTTATACAGAATGCCGGAAGAACAA
GCTTTCTGTGTTTTAGTCAATCTTATGTATGACTACAAGTTACGAGACTTTTACAAGCAAGGCTTTGAGAATCTCTATTT
GCGCCTCTATCAACTCAACAGACTAATGGAGGAACAGTTGAATCCTCTCTGGAACCATTTCACCGAGCACCGCATTGAAA
CCCATATGTTCGCCTCTCAGTGGTTCCTAACTCTTTTCACTGCCAGATTTCCTTTGTACTTTGTCTTTCATATTATCGAC
GTTTTTCTTCTTCAGGGGACGGAAACTCTCTTCCAGATGGCTTTGGCATTGCTAATGGTATGCAAGAAAGACCTGCTTCA
ACTGGACTTTGAAGGAATCCTGAAATACTTCAGAGTGTCTTTGCCCAAGAAATGTAGAAGTGAAGAAGCGGCTAAGCAGC
TAATCAAGCTCGCTTGCGGCATTAAAGTGAAAAAGCTGAAAAAATACGAAGCCGATTTTATCACTCTCAAGGATGATTGG
GAAATAATTTCTTCGGATTCAGAGGCGCAGGATCGCCGAGATAGCGAGGCAAGCGAAGTAGAGAAACTTCGAATGACCGT
CCAAAGGTTGGAAGAAGAAAAGTTATTAATGCTCGATGAAATCTCCCAGCTAAAGGAGATGCTAAAGAGAGAGGTGGACG
TGGCCGACACGGAGAAAAGGACCAACTCGCAAGTGATCCACGACTATAAAATGGTTCGGCAACGGCTAGATGTGCAGCTA
AATGTTGCTAGACAAGCATTGGACAGTTTGAAGGACGCCATTTCTAATTGTCCAGATTGTGTTAAGTTTTGTGGGTATGA
TGGCGATTGCAAACGTCCTCGAGGTGGAGCTGAGCTGACTGGAGACGCCAGAATTAGGGAGTTGGAGCTGGAATTGGCCC
AAACTAAATTAGCCCACGTAGAGGCGGAGTGCCGTAATCAGCTGCGTTACACTGAACAGGAACTAACCGCAGCCAGAAGT
AGCTGGGCGCCTTGGATGAGCAAAGCCATCACTTCAATTAAAGAGGTTGCCAAGCCGAATGCGCCGACAAACTCTTCAAA
TACCTCGACATTTATTTCACACATCAACAATGCCTATAGGAGAGATAGTGTGCCTTTAAAGGAGCCGGGAAAAATGAAGG
TTTTAACGGACGACATTCGCCGCGAATCCGCCCCAGTTATAAAGGATTCTCAAAGTTGTAACAGCTTGAAGACCCATCAT
CATCACTCCTCATAAGGCGTTTGAGTGTCGTAGTTTTAGAGTTTGTTCGTTTTCCGTTTGCATGCCTATATGCGGTTCAA
GAGTCCACGACGTTCCGTTTTCATTTATAGGTAGAAGAGCCTTCAAATTCAAGTGATTTTGCAATTGAGTAATTGCCTCA
TTAGGCCAAACTACCGTTGGTTTAGTTTTTTCAATACATACGTTCGTGTGCTTCAGCAAGCGGTCCACTGGTTGTACAAA
TATTTAGATATGTGTTTTTTGTAGTTGATTTGTATGTGTGTTTTTCGAATAATACTCTATCATTTGGGATTTTAGTTTGG
TGGCGTTTTATACTCCTAATATTATTTGTGTGCCTTGAAACTAGAGCAGCATTAAATATTTTTCCGGCCGTAAATAATTA
CTAGGTACAATACTCCGAAATCCCCTATAATCCCGGACTCTTTATGTATGGTTTCTGCAGATGAAAGTGTATTTTTTAAA
TATAAAGGCGTTGATATTAAATATGTAATGTATCTTTATATACTGGAGTTGATATTTTCCTCATAGATAAACAGTACTTG
ACGAAACGTTTTTCTAACACTTGTTTGCAATAGTGGCTCCGTGTTAATAAAAAACGGCGAATTCCGTTTGCTGGTGCATA
ATATGAAATATCAGGCCATAATGGCTTCAACAATAAGCTACAGCCATGTTTCTCTAGTGTGATAGTATTTTAGTTGCGTG
ATAATGCTATGATTAAGTTATTTGTAAACGAGATATTGTTGAGTACACCTTTGAAATATATTTGAATGCACTTTTGTA
PEP:
>DPO000495-PA
MSDKFHEQTCDFKVGQSTFYGTPVNLGDEPLTQDLSPAEKQDSMKLDHNVDQDCTIFSGITYLGAAQINAPKSEVEIHRN
MAILNEQSVEQGIKVAVSVPLSSQGLVVLYDGQTNSVISRYEVHRILFYARGSVDSNEAGCFSFTWSHGDSQESAIFLCH
VFRCDIVEAVSRVSACFAKAFQRAPKSMSSSVTSASDMMCGSITALPEPRTLMYVFEVNLEIKEEDGKGSYSTVGKDRNG
FRLKTNILKQLLISIKQVSDNGPHLVIERCFGVLIASGRHVRHSDMRLLERNEQKNHSTENNCTSIIAMWDPTEQNFEPL
NAETQKDTKQYMTVGIDLVIRGIQEPVRFVIETPVRIFGQSERNFWYFQKKTLIQQFYLNLRETISSDLSEVKYEVLNME
TSGELDRNLLNLNLNLSSLIQSPSITSIDTLTPKEEYHSDGDEPLLSGTGLVSKDCSEVVLESWADLLTKWKQTDQRPKQ
LASLVKLGIPEALRGEVWQRLAGVQENSEMMNMYRVLITKESSCENVIQRDIARTFPAHDFFKEAGGLGQDSLYRMPEEQ
AFCVLVNLMYDYKLRDFYKQGFENLYLRLYQLNRLMEEQLNPLWNHFTEHRIETHMFASQWFLTLFTARFPLYFVFHIID
VFLLQGTETLFQMALALLMVCKKDLLQLDFEGILKYFRVSLPKKCRSEEAAKQLIKLACGIKVKKLKKYEADFITLKDDW
EIISSDSEAQDRRDSEASEVEKLRMTVQRLEEEKLLMLDEISQLKEMLKREVDVADTEKRTNSQVIHDYKMVRQRLDVQL
NVARQALDSLKDAISNCPDCVKFCGYDGDCKRPRGGAELTGDARIRELELELAQTKLAHVEAECRNQLRYTEQELTAARS
SWAPWMSKAITSIKEVAKPNAPTNSSNTSTFISHINNAYRRDSVPLKEPGKMKVLTDDIRRESAPVIKDSQSCNSLKTHH
HHSS
Swiss-ProtRab GTPase-activating protein 1
SUPERFAMILYSSF47923  Ypt/Rab-GAP domain of gyp1p superfamily     
Gene3DG3DSA:2.30.29.30     
PfamPF00566  RabGAP-TBC; Rab-GTPase-TBC domain     
SMARTSM00164     
ProSiteProfilesPS01179  PID; Phosphotyrosine interaction domain (PID) profile.     
CoilsCoil

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