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Gene detail [Fasta]

Species Dendroctonus ponderosae
GeneDPO001546
PositionSeq_1102685:429584..442065[GBrowse]
sequence mRNA: 
>DPO001546-RA
GACCGGCGTGCACACATTCAGAATTCAGAGCACCCTTGATTAGTTGCGCTCGTTTTAATCAAGACAGCGGTACGATTTTT
TAAATACTTCCTCCTTTTTAGGATGTAAATTTTAACGATAGTTGAATAGTGACGAAATGGTTTTTTGAATCGGACTCTTA
AGACTCCCGGGAGCCTTGAGTTTATGCTGATTGATGTTTAAAGTGACTACCAGATAATACTCCAATTTTTCTACTTTCGA
ATTGAATTTTTTTAAAACACTAACTGTTCAAAGTTGTCCCTTATAAAATTCTTTAAAAAAATATAAAAAGTGGATGGTTT
TAATGGAATTCTTTTGATAGTTATCCAATGATCATGGTCACTTCTGAGTTTTCTGAGTGCCAGGAGTAGTGTACCTGCTA
GTGTAATTTAGTTCTGGATAATCAGGTAAGTTGAAAATTAAAAACTAGTTAAAAAGCAATAATTCCATTTTTTTCTAATT
TAAATTTAGTAAGCCGCTCTATATTGTTTCCAGCTTCGCTTGCCTTGGATTTCGCAGCTTAAGTTTAACAATAATTCTCA
TTTTGTTAACGATCGATTTGGAAAGGCTGTTTTTTCTGTAGATTTCTATATATTATTCAAAGTACATATCTTTGCCATAG
CCAATATTGGCAATAGATAGCATGCTTTCGCTTTGTTAATTTATTAAAATTATATTTACGTTGAACGTAACATCTTGGAT
ATGTCTGCGATGAGTTATTTAAATATTTGGCACAGATCTTACCCGGGCGTTAAAATACTTACTATAAGGTGTGCCACTTA
TTTCCTGACCTATTTTTTCTAGATGCACGACGCCTTTTTATAATATTCTTTATACCTATGCTGCACAACCAAGTGCAACT
AAGTAGTATCGAGTTTGTTTTTGCTAATTTACATCTGTGTACATGAGCTGGTTTATTGGAGCAGCCACCGGATACTGAAA
CTGACTTTAATTCGTAGTTTTTCGTTTGAACAGTCCTCGTGTATGAGAAAAATAGTTAATATTAGGCAATTTTGGAAAAT
AGAAATAATTCCAACAAAACAGTCTAAACCAGATAACCTAGATGATCAATTTTTGAGTTATTTATTGAAAAAAATTATAC
CTGTTAATGTATACAAATATTTGCTCTTTTAACTGTTAGACATTTGTTAAAATACCTATATGTTTTATTTACATAGCCAA
CTAATATCAATCTCAAAATCTAAAAGTCACACAATCTATACAAATTAATTATGAAGATAAACGATAATGATGAAAATCTG
TATTTTTTTTCTAATTATTACAGTTAATTATTTACATTTATTAGGTTTTCCATAACAAGGAAACAATATTGCATATATTT
TAGATCAACAATTTCTTTATTAAATGTAATATTTTTCCTAATTCATCTATCGAAAATGACGCTTTTGTTGTTTATTTTAC
TATATATATACAGGGTTGCTCATTAGTGCGTCAAAGTGCGATATCTCAGTAAATATGAACTTTACAAGAAAATACGTCCT
ACGAAAGTTTTTCATGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNCTTTCGTAGGACGTATTTTCTTGTAAAGTTCATATTTACTGAGATATCGCAC
TTTGACGCACTAATGAGCAACCCTGTATATACATCTGCTTTTTTCTCAAAGAAACAAACTAAAAGTGTAATTAAGGTATG
ATAAAATCGTGCCGAATTTTTGCCAAAGTTTTCGATTTGAAAGAGCTAAAAATAGTAGAGAATTTCAGATTTCATGATTT
CAGATCCTGGCATTTTTAAATAAATTATTAATTTATTTATTTTAATAGCTCTTTCATAACAACTAAGAAATAGCAATAAA
TTAATAATTTATTTAAAAATGCCATGAACCTTTCACATTAGTATGAAAGGACAATTGATTAGTTTATATTAACATCTGTG
CATATAATTCAAAATGATTTCGTAAACATTAAGACCATCAAATAATCAGTAAATTTAAAAAAGCGATAAACATTTGTATA
TCAATTTTATTTATTTTAATTTTAAATATTTTATATAGCTACTTAAGCTCAATGATTAAGAACGCTTTTTGCCATTAAAT
TGCTGATTAAATGTTTTATATGAATTTCAATTGAATGCTGAACTGCTCAACCACGGTCAGATTTGCTCTAACTTTGCCTT
GCAACTGGATAAATTCATTAATATAATAATCAAAACTTCTGAACCATCGTATCTTACGAGTTGAAAATATCAGAACTAAT
AGAAGAAATTCGGCTCCAAAACTATTGAAAATGTTGTTTATGTTCGCACTGAAACCTGATTGTTGACGACTTTGAAAACA
CAGGTCATAAAATATGATAAAATGGACGTTTTTTTGCAAATGCACGGTCTTGCCCCAAAAGTTGTAACTTCTGAACCAGC
ACACGGTAGGAGTTCAAAATTAGAGAACTAAGTTCCAGACTTTGGAAACGCAAGTCATATAATAGACGTTTTCCCGCAAA
TACAGTCTTTTGCCCAAAAATTTATAACTTCTGAACCAGCACATGGTGTGCATAGAAAATCTCACAACTACCTAATAGAA
GATGTTCGGCTCCAAATGTCCTGAAAGTTTCGTTATACTCGCACTGAATCCTGTTTTCTCTTGATTCTCTACTTTGGAAA
CCCAGGTCATAAAATGAAAGTTTTTTCTCAAATACACGCTCTTGCCCAAAAATGCATAACTTCTAAGCCAGCTGATGGTC
TTAGTTGAAAATTTCGGAACTATTAGAAGACATTCGGCTCCAAAAGTGCTGAAAATGTCGATTAAGTCGCACTGAAACTT
AAATGTTCGAGACTTTAAAAATGCAAGTCATCAAAATAGGCGTTTTCCCGCAAATAACGCTTTTTCCAAAAAATTATAAC
TAATTTATGTTATAAATATATTTATTAATAACTAACATGGTGTGCATAGAATAGAAATCTCGCAACTAATAGAATACATC
CCGCTCCAAATGTGCTGAAATATTCGTCATAGTCGCACTGAAACCTGAATATTCCCGACTTTGGGAACACAGTTCCCAAA
TTGAACGTTTTTCCTCAAGTAGAAGCCTTAGCCAAAAATTAATAACTTCTTAACCAGAGCATGGTGCGAGTTAAAAATCT
CATAACGAACAGACGATATTCGGCTCTAAAAGTGTTGGAAAAATTCGTTTACTCTCACAGAAACCTGAATGTTTCCGACT
TTGGAAATATGATTGATGCGAGCGATTTGATTTTTGTTTCAAACCTTCAAATTAAACAAATAATCGTATGTTGACGTAAA
GACAGGCTTTAGATCAGGTTTTTTAATTTTTCGCCTATTCCGTTTACTTACGAGATGATCACAAAAGATCAACTATTTGA
TTGCTTGCACAGATAAAAGTTTTTCTTTTGCACCTATTTCCTAAACTTTCTTTACTTTCAAACAATTTGCTCATTCATGC
AATCCTGTATACTGAATTTTTGTATTAAGTCGACTTTGAAGTTTTAGCTTTAACATGGGAGCTAAATTTTAAAACATACC
AAAAATAATTTTGAGATGAGGTGTTTTTAATTGTATAATTGCGGTAGATAACTCTTTAAGCAGAAATTAAATCGCTGGAA
GCAATCAAAATTTAGCCAGTTTCTTTTGTGGATCTCTTTAAATAAAAATCTGAAATTTGCATTGAGAGCAAGAGGATATC
AACTATTCAGAGCCTCAACTAACAGGAATTATTGTTCACAATTTTCGATTGAAATTAGATTAGGCAAAACACTGTTTCAA
AGAAAATAACACTTGTGAAGAGATCAAAGTTCACAAGGCGCATTTTTCAATTACACAAATTTCCAGTAGTTTAATACCGT
GGTCATATCCAAGACGAAGCTTTATAATTTTCTATTGTCTTATCGTACTAGTTTAATTTTTCTGATTTGCTACTCTTTTT
TTTCATATTTGAATGGTTGGTTTGTACTTTGCAGCTTTGCACGCCGTTATTAACATGCAGGAGATTTTCATAGATATTCC
TTCACCCAATTCGACTAAAAGGTGATTGTTTTATTATAATTTTTTAATTTAAATTTTTCCAGTAGTACACTTTTTTGTCA
TTAAATCTAGTGTAGGTAAGAGTGCATTAAGTTCTGAATTTAAAAATAATTTCAACACTATTTGCAAGTGCAACTATGCT
AACGCGATGATTAATTGCTAAGAGCTAATTTTGCGAACGCTTTTCATACTCTATGAGTTAGTTGGTTTTCATAAACAACA
TGAGGCTTTGAATTAACCCAGTAAGTTTTAATTAAGTGTCATTAGCAATGTTGACTCTAATCAAGGTACAGAGAGCTTAG
AGGCTTGAAAATACATATACTCAAACTATTCAAAAAGAAAATATATTGAAGGGTAGTAGATTAATCAATTCTCAAATCAT
CATGCGAAAAATAATTCTAGAGTATTCTCAAAGAAAATATAAAGGTCAATTTTACGAAAGTTTTGTAATGGGAAAAATAA
TTTATCCAGGTTCATCTACGATATTTTCGAAATGTCTCCGACAGCGACGCTTTTCAACCAACCCTCTCAATTCACACCGT
CTTACTCCAACGTGAACAGACACTCAAGGCAGCCTGAATATGCGAGTTCTGGTTCAACCAATTCGCTATTTACGCCAACC
TACACGACCCCAAACAATTGGTACCAGTACCAAACTACTGAACCTTATCAGGCAAAAATGTTAAGTCCCACATGGAATTC
CACGTATTCACCAGGCCAAGGCCAATTCTCCTACAATCCCTATAACTTGGCAACTCTCAGTAATCTAACCAGCCTGAACA
ATTTAAATAATCCCTTTTCGAACGACCATTTAGCTGACATAACCGAACAACTGGCCGAATTAGCCTTAGATCGAAGACCT
TTGAAACGACCTCCAACTTCATACTTGTGCCATTTATGCTTCCAGAAAGGCCACTATATAAAGGACTGTCCACAGAGGCC
CTTGGAAAAACCAGATGGACTAGATGTGTCCGATCAATCGAAAGTGCATCCTCAACACTTGTGCCAAAAGTGCAAGGAAT
TGGGATATTATTGCAGAAGAGTGCAATAAAGGGAAGAAATGCTTCCTTTTCCTTTACACTATCTTAAAGTTAATTTAATG
TTACTACTTTCAAACCGATATAGATGTTTAGGTGTTTTACTTGTTCAGTTGAATGTATTTTTTATTTTTCTTATTTTTAT
ATTTTTGTTAACGATTTTATCAATCAGTATTTTGTTTTGATCATATATAGTTTATTACTGCCTAATAAGTACTTAGGTAT
TTGATGCAAGATCTGATTTGATTTGCTGTTTTCGGTGTATATAATTTAAAGGCCGCCGAAAATTTTTTGTACTTACTGAT
GTCCATGATATGGGCTTCTCGGTCGTTATAAAGAATTTTTTTATGTCCGTCCTATATTTCTCTCCGGACGTTTCACAGGG
ACGAGTAACTTCTCTCGATAACTCCTTAAAAAAACGACATCTATTTCGAATCACCCTGTATTCTGTAGCTTTCTTTATCG
AAACTAGCAGGTAATAAAACGCTACGATAAAAAACTGTTTTACTTTAAATTAAGAAAAATTTTCTTAGCCACTGACTGAT
GGGCAAAAGCGGATGATTAAACTTGCTAATGTAAATTCGCAGTTACTGCGTGATTGTAAGGCGTGTTGAAACTACTTCAA
ATAATAAAACATGTTATTTAAAAATA
PEP: 
>DPO001546-PA
MSPTATLFNQPSQFTPSYSNVNRHSRQPEYASSGSTNSLFTPTYTTPNNWYQYQTTEPYQAKMLSPTWNSTYSPGQGQFS
YNPYNLATLSNLTSLNNLNNPFSNDHLADITEQLAELALDRRPLKRPPTSYLCHLCFQKGHYIKDCPQRPLEKPDGLDVS
DQSKVHPQHLCQKCKELGYYCRRVQ
Swiss-ProtZinc finger CCHC domain-containing protein 24
SUPERFAMILYSSF57756  Retrovirus zinc finger-like domains superfamily     
Gene3DG3DSA:4.10.60.10     
PfamPF13696  zf-CCHC_2; Zinc knuckle     
ProSiteProfilesPS50158  ZF_CCHC; Zinc finger CCHC-type profile.     

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