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Gene detail [Fasta]

Species Dendroctonus ponderosae
GeneDPO002483
PositionSeq_1102381:251496..258595[GBrowse]
sequence mRNA:
>DPO002483-RA
ATGTTGACTGACGAGGTCATAGATGAGGACATTGAGGCACTTCTGTATGCTCAGATATATTATGGGAAATCTGATCATAT
CGAAGCGACCCAGCCAGCTGAATATCAGAACGATCCAAGACCGTCATCGTCAGGGAGTCAAAATGATTTAGCATCTTTGG
AAAGACCTAGTACAGGGCTTGGATTACCAATAGATCCTCCAGAGGAGCTGCCTCAAATCGATCAGACTGACTCGACCCCT
GCGCCACTTCAAGGCTCAATTTCGTCAATTGCGGAGCTTGATAGTGGTGGGTACATTCCACTAGGTGTGTCTTCAAGTAG
CACAATTCACACCTATACACAAACCCACAAAGTCCCGAGAGCACCGAGACGAGTGAGAAACATCAGAATCCGTCAGTGTA
TTTTACCTAGCAAGCACTTTTGGAATCGATTAAAAAACTACAAAGACTTATGGACCAATCAGTGTGAGGCTGATTTAAAA
AGATTTGAAGCCGGCAAGCTGTCTGAAAAAGTATTTTTCAACAAGCTAAACAAGAGGTTTTCAAATCGACTTAATAATCA
AATAACAAAGAAAAACAAACAAAACCAGTGCAGGTCGTACATTTTAAACAAGCAACAGGGGCCGGCCAGGAGTGAAGTAA
TTAGCTTACTCAGCGACAGTGATGATAGTTCGGGTGTAGAGGTTACTGACTGGCAACCCGACATGAATAGGGACTGTGCT
AACGAACAGGTTGAGGTGGCCAGCAGTATGCCACGAGAGGAGCAACCTGAACATTATGATAATGATGAAGACGATGACGA
TATTGTATATATAGAACCACCCCCAGTGCCTTTCATCAACTTGGAAGACGACGACGACGACGACGATGATGATGAAGAAG
AAAAACAACCTGAAGATGTCCCACCAAACAAACTGTCTCAAGACCTGCACGGGTCCGATTTTCAGGATGTTGAATTCGCT
CGGCCTGCCCAGCCCACCGACGTCTATGAAACTGAAAGTAGCACCAGTACATCAGAAATGCCCAAGGATTTCAACAATAG
CGTAAAAACTATTGTTTTTAATGAAATCGATTTTCCTAGAGAGGATCTGTTTGAAGAGGACAATTTGGACAAGTTTAGGG
AACTCATTGGTCCAATGAATACTGAAGTCGTGGAAGCTCAGAAGGCCGGTAAAGTTATTAAGCCTTTACACCAAAGAGAT
TCGTCGAGCAGCTCCGAGAGCGACTATGCGGCGACGACTTTGCATCAGAACTTGCCCTACTTATCGCCTATGCAAGTTCT
ATCCAAAAAACACAGACCGTCCTCTAAGCATAAGAACAGCTCTTCCGAATTGGAGGAGGATGACGTTGCTTCTTCGACAC
CGGTTAAAAAATTAAAGAAGCACGACTCAATGCTTGGCTCAGAAGTTGTTGAAGGCGGTGCGAAGAGAGTGAGAAAAAAG
AAGAAAAAACTGGCTGTTAAAGATGTCAAAGAAACAGAGGTAGTAGGCAGTTTCCAACCTAATGATCAGACGAAAACGGA
TGTGGTTGATGCACCTCGAAAAGCGAAACGAAAAAAAAAGCGTCGAAGAAGTGGCAGTCCGGTGGAAGTCGAAGTTAATC
ATGACCCAGACGTTTTGATTAACACTGAAGACACTGTAAAGAAAAAGTCGAAGAAGCGAAAGGAAACCGTGGCAAATATT
GATGTCATCACCACATATGAACTACTGGAGAATCAGTGTTTCGAGAAGAGCCCCAAAAAGAAAAAATCGAAGAAAAAGAG
ATTGTCCTCAGCAACCAAATCATGGTCTGATGGTCAAGAGGCTCCGCCAGATAAAAATGTCGAACAAGATGTTGTGGAGC
AAATAGTCGAAAAAGGCCAGAATTGTGTAGATGAAAATGAAGAAAGCGCCGGAAGGAAAGAAATGGAAGGTCAGTTAATC
GATGTAATAGATCTTAACACCTCAGAGTTGGACGACCAAGACCCAGAGCGTGACAAGTTTGATGAAAGTGACGATGTGAT
TCTTATAGAGAAAGAAATTCCGATACATACAATAGAGTCTTCCGATTCGGAAGTAGAGAACGAATCCGGCTGTTTTTCGA
CGGTTGCAGAAGAACTGCATTTAGCGAATGTGCAGCTCATTACCGATCGACTTCCTGAAATCCTGCAAGATCCCAAGTAC
GATATCGATTTCATACAGAGCAAAATGTCAGATGATCCGGAAAAGTGGAAAATCCTTCCAGCCGATCAGCAGATAATAAG
TGTCGAAAGTGGTGGACCACGTTGCAGACGTTGTAGAGAACGGGGACACATTTCCCAACACTGCAGGAACAGGTTAAGAA
TTCCGAGCTGCTCAATGTGCGGCTTTCAGGGCCATCAGGAGCCTAGATGTCCTCACAAAATCTGTTTGAATATTAAAGCG
GGCCCGATTGTAAAGCCCGAGAAAGCCGATGTTCGACCAAGAGAACGGCAATGGTGTTCCGGGTGCAGCAGAAATGGTCA
TTTCGAGTTTGAGTGCACAAGCTGCAATTGGATAAGGGAATACCCTATAACGACACCATTCATATGCAGTTTCAAAGATG
TATACCCGCACTCAAGTAAAAGAGAACGGACAAACGTCGATAGTAATTCGGAAGTTCCAAAAACCACTCAAGGGCATGGA
CCGGTTGTTGAAAATGCTACCAAACTAGCGTCCACAATCTCCGATTCTAAAGTTGCTGCGGAATCTCAAGCAGAATCAGC
TAAATCAATTTGCCCGGCCAGTGAGAGTTGTTCCACTACCACTGAGCAAGACCCTGCAAGATCACCAACTGCAAGTAGAT
CTCCGATTTTCACCAGGGATTTGCGAGCCAATCGTCGCGACCGCGAGCTAGCGAATCAAGCTGGGAAACCGAGACTAAAT
CCTCTTTCCGTGATGCAAGATCGATGTTTGACCACCGAATCCACCCAATACAAACCTTATCAAAGCGTACTGAATCCTTG
CTCTGTGCTGGGGGCCTGCTCGCCTGCCAGTGTGAATAGAGAACTTCCGATTCCAAATGAATCGTTTGGTATTGACATCA
ACCCATTATCAAATGTGATGGAAGGTGGCGGACCATTTCAGCCGATATTCAATGGGGCGCCACTACAAATGAACTACGAA
ACGCCTGCTATGAACTATTTGCCTCCAAATCGGATTCGTTATGGAAGAAATATGCAGATTCCTCCTAATCCTGCTATAAG
GCTAATGGGAAATGCTGCCCAAGACTACAATGAGTACGCTGACTTTACCTTCGATAACCGGTACTTCGACTATTCAGCAT
TAGGCGCAACCAACTGTTATGTGGATTTCGAACAGCCATCGGCCTCATCCATGGCACCCGGATGCGAGAACGAACCGAAC
TCCGTTCTTCTAGTGGATGAGTTTGAAAAGCATTTCAATGTAGAGCACGCGGTAGCCGAAGTGTTCGGTCGCAGTCCGAT
GAGCGAGTTAAAGAACTTTATTGTCGCGGAAATAGACAAACTGGACAAACTAAGTGTTCGCCATGTCAGTGTGTACAAAA
ACATGCTCCTTAACATCGAACAGTTAAAAAGTGGTGTGCAAAGTGATTCGGTGCGACATCAGATCTATTCGCTGTACAAG
AGCTTGAACATGTTCCTGTTTGGCGTGCACAAGCTCAGCAATGGCGTTCGGAATTTGAACTTTTTACAGAATTTTGTGTA
CAATACAGGTCGCGGGCTGCAAGACAAGAAACGGGCAGACCTGGTCAAGGCCTACGGGTATATTTACGGTGGTGAACATG
CGAACTTTAATTACAGAAAGGGTTTGAATAGTCTAGTATTCGGACAGGGCGCTGATAAGAGGAAACATTTTTCTTGAAGA
GACGCATGTTATGACCTCCGTGGTGAAGAATGTTTATTTCATTGAATGAAATGACTCGCTTTTGCACGCTTAAGCAATGC
TACCATAAGGATGCATGCAAGTTGGGTAGGAAATCACAAAAATGTGTTTATTTTGTGGGTGGTAATTAATGTAAGTAAAG
CGATATTTAGTTTGGCATTAAACAATTTCTTTCTCAAAA
PEP:
>DPO002483-PA
MLTDEVIDEDIEALLYAQIYYGKSDHIEATQPAEYQNDPRPSSSGSQNDLASLERPSTGLGLPIDPPEELPQIDQTDSTP
APLQGSISSIAELDSGGYIPLGVSSSSTIHTYTQTHKVPRAPRRVRNIRIRQCILPSKHFWNRLKNYKDLWTNQCEADLK
RFEAGKLSEKVFFNKLNKRFSNRLNNQITKKNKQNQCRSYILNKQQGPARSEVISLLSDSDDSSGVEVTDWQPDMNRDCA
NEQVEVASSMPREEQPEHYDNDEDDDDIVYIEPPPVPFINLEDDDDDDDDDEEEKQPEDVPPNKLSQDLHGSDFQDVEFA
RPAQPTDVYETESSTSTSEMPKDFNNSVKTIVFNEIDFPREDLFEEDNLDKFRELIGPMNTEVVEAQKAGKVIKPLHQRD
SSSSSESDYAATTLHQNLPYLSPMQVLSKKHRPSSKHKNSSSELEEDDVASSTPVKKLKKHDSMLGSEVVEGGAKRVRKK
KKKLAVKDVKETEVVGSFQPNDQTKTDVVDAPRKAKRKKKRRRSGSPVEVEVNHDPDVLINTEDTVKKKSKKRKETVANI
DVITTYELLENQCFEKSPKKKKSKKKRLSSATKSWSDGQEAPPDKNVEQDVVEQIVEKGQNCVDENEESAGRKEMEGQLI
DVIDLNTSELDDQDPERDKFDESDDVILIEKEIPIHTIESSDSEVENESGCFSTVAEELHLANVQLITDRLPEILQDPKY
DIDFIQSKMSDDPEKWKILPADQQIISVESGGPRCRRCRERGHISQHCRNRLRIPSCSMCGFQGHQEPRCPHKICLNIKA
GPIVKPEKADVRPRERQWCSGCSRNGHFEFECTSCNWIREYPITTPFICSFKDVYPHSSKRERTNVDSNSEVPKTTQGHG
PVVENATKLASTISDSKVAAESQAESAKSICPASESCSTTTEQDPARSPTASRSPIFTRDLRANRRDRELANQAGKPRLN
PLSVMQDRCLTTESTQYKPYQSVLNPCSVLGACSPASVNRELPIPNESFGIDINPLSNVMEGGGPFQPIFNGAPLQMNYE
TPAMNYLPPNRIRYGRNMQIPPNPAIRLMGNAAQDYNEYADFTFDNRYFDYSALGATNCYVDFEQPSASSMAPGCENEPN
SVLLVDEFEKHFNVEHAVAEVFGRSPMSELKNFIVAEIDKLDKLSVRHVSVYKNMLLNIEQLKSGVQSDSVRHQIYSLYK
SLNMFLFGVHKLSNGVRNLNFLQNFVYNTGRGLQDKKRADLVKAYGYIYGGEHANFNYRKGLNSLVFGQGADKRKHFS
Swiss-ProtZinc finger CCHC domain-containing protein 7
SUPERFAMILYSSF57756  Retrovirus zinc finger-like domains superfamily     
Gene3DG3DSA:4.10.60.10     
SMARTSM00343     
ProSiteProfilesPS50158  ZF_CCHC; Zinc finger CCHC-type profile.     

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