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Gene detail [Fasta]

Species Dendroctonus ponderosae
GeneDPO004506
PositionSeq_1103031:154906..165951[GBrowse]
sequence mRNA: 
>DPO004506-RA
ATGCCTACGATTGAAGAAGTATGTTCCACTTTCGGTTTAAATGACGTAGAAATTGATTACACCGATCAAGACATGCAAAA
CTTAACATCGTACAAGTTATTCCAGCAGCATGTGAGACCGTTCTTGACAAAGGAAAATCCTAAAGTGCCAATGTCTAAGC
TGATGATGTTAGTAGCCGCCAAGTGGCGAGATTTTTCCAACATTAATCCTCATCTCCAATCGGAGAATTCCGAACCGTCA
AGTTCGTTGGTATCCGATGATACTTTTTCAAAACCAATGCGAGCTTCAAGAGCTTCCAAAGAAATTGCATCAAAAATTGT
CGAAGCTGAAGCTGAAGAATTTGACGACGATGACGAAGATGATGAAGAAGATGAACGAAGCTTATCCAGTTTCAAGGAAA
AGAAGAAGCGTGGACGTAAACCATCAGCTAGGGGGAAAAAAACGTCCAAGGTCCCTACACTTAAAATTAAGCTGGGAAAG
AGGAAGAGGGGCAGTTCAGAAGAGGACGAAGTCAGCAATGCCGGCTCAGATAAAGACTCCGATGCTGAGTTTGAACAGAT
GTTGCAAGATACTGATGATCCTAAATCTAAATCAAGTGACAATAACGACGCGGGTTCGTCTAAAGCTACATCCGAGGCCG
GTGACGAGGTTCTTCCGAAACGGAAAGCTAAAACAAAGATTGGTGTTAAGTCTAAAAGAAAACGTAAAACAAAGCAGAAA
GATGATGAGCCTTATGAGGTACAAACACTTATAAATATTTGTTTATTAGAGTTAATTTATTCTTTTTTACAGCATCAAGA
TTATTGTGAAGTTTGTCAACAAGGCGGAGAAATTATACTTTGTGACACTTGTCCTCGTGCTTATCACTTGGTATGTCTTG
AACCCGAACTTGATGAAGCTCCTGAAGGTAAATGGAGTTGCCCACATTGCGAAAGTGAAGGACCAGCCGATCAAGACGAT
GATGAGCATCAGGAATTTTGCCGCGTGTGCAAGGATGGCGGAGAACTTCTTTGTTGCGATTCTTGCCCCTCGGCGTACCA
CACCCATTGCCTTAACCCACCTCTAACTGATGTGCCAGATGGGGACTGGAAATGTCCGCGATGCAGCTGTCCAGCGCTCA
AAGCCAAAGTAGCGAAGATCTTAACATGGAGATGGAGCGATGTAGATGTTGTCAACAAAGATAAGAACGGCAAAGAAGAA
ATTACCAAGCATCGTCGTCGTGAGTTTTTCGTAAAATGGCACGAATTGTCTTATTGGCACTGCAGTTGGATAACAGAACT
GCAGTTGGACGTATACCATCCACTAATGTTCCGCAGCTACACTCGCAAGTATGATATGGAAGAGCCCCCCAAATTTGAAG
AACCAATTGATGAAGCCGATACTCGTTGCACTCGACTTCTTAAAATGGGAGGTAGTACTAATGATCAAGAAATGGAAGAG
AAGTATTACAAATTTGGCGTTAAGCCGGAATGGCTTATCGTTCACAGGGTCATCAATCATCGCACCATGAGAGATGGGAG
GACTTTATATTTAGTAAAGTGGAGAGAATTGTCATATGATCAAGCGACATGGGAAGAAGAGGGAGATGATATAGCTGGTT
TGAAAACGGCTATTGAATATTACCAAGACTTAAGAGCAGCAACTTTAAGTGGAGGGAAAACTGGCAGAAAACCTAAATCT
TCTAAATCGTCCAAGTCTAAAGCGCGAGAATTGTTAGATGATGAGGACAGAATTACCCCGAGGCGGTATACACCACCTCC
AGACAAACCAATGTCTGACCTAAAAAAGAAGTTGGACAAGCAACCGCTCTATTTGGATGAATGCGGAATGCAATTACATG
AATATCAATTAGAAGGAATTAATTGGTTGCGTTATTCATGGGCAAATGGCATTGACACTATTCTGGCGGACGAAATGGGT
CTCGGAAAAACCATTCAAACTATAACTTTCTTGTATTCTTTATATAAAGAGGGCCATTGCAAAGGGCCATTTTTAGTGTC
TGTGCCCCTTTCTACCATCATTAATTGGGAAAGGGAATTTGAAACATGGGCGCCTGATTTTTATTGCATCACCTATGTTG
GTGATAAAGACTGCAGAGCCGTAATTCGTGAAAACGAGTTGACATTTGAAGAGGGAGCTGTAGCTCGATCGGGAAGAGTA
TCCAAAATAAAATCAAATTCAATTAAATTTAACGTCCTATTGACGAGTTATGAACTGGTTTCCATCGATTCTGCCTGTTT
AGCTTCAATTGATTGGGCTGTGTTAGTAGTCGATGAGGCTCATCGACTTAAAAGTAATCAGTCAAAATTCTTTAAGGTTA
AAAAGTTGCACGAAATGTTAGGGCCCCATATGTTGCGACGTTTAAAAACCGACGTATTGAAAAGCATGCCGTCAAAATCT
GAATTTATCGTCAGAGTTGAACTGAGTCCGATGCAAAAAAAATATTATAAATACATTTTAACAAGAAATTTCGAAGCGCT
TAACCCAAAAGGTGGTGGTCAGCAAGTTTCCTTACTAAATATTATGATGGACTTGAAGAAATGTTGCAACCATCCTTATT
TATTTCCCGCTGCAGCCGAAGAAGCTCCTCTTGGATTTCATGGACAGTACGATATTCAGCATTTAACTAAATGTAAATAT
TTTTAA
PEP: 
>DPO004506-PA
MPTIEEVCSTFGLNDVEIDYTDQDMQNLTSYKLFQQHVRPFLTKENPKVPMSKLMMLVAAKWRDFSNINPHLQSENSEPS
SSLVSDDTFSKPMRASRASKEIASKIVEAEAEEFDDDDEDDEEDERSLSSFKEKKKRGRKPSARGKKTSKVPTLKIKLGK
RKRGSSEEDEVSNAGSDKDSDAEFEQMLQDTDDPKSKSSDNNDAGSSKATSEAGDEVLPKRKAKTKIGVKSKRKRKTKQK
DDEPYEVQTLINICLLELIYSFLQHQDYCEVCQQGGEIILCDTCPRAYHLVCLEPELDEAPEGKWSCPHCESEGPADQDD
DEHQEFCRVCKDGGELLCCDSCPSAYHTHCLNPPLTDVPDGDWKCPRCSCPALKAKVAKILTWRWSDVDVVNKDKNGKEE
ITKHRRREFFVKWHELSYWHCSWITELQLDVYHPLMFRSYTRKYDMEEPPKFEEPIDEADTRCTRLLKMGGSTNDQEMEE
KYYKFGVKPEWLIVHRVINHRTMRDGRTLYLVKWRELSYDQATWEEEGDDIAGLKTAIEYYQDLRAATLSGGKTGRKPKS
SKSSKSKARELLDDEDRITPRRYTPPPDKPMSDLKKKLDKQPLYLDECGMQLHEYQLEGINWLRYSWANGIDTILADEMG
LGKTIQTITFLYSLYKEGHCKGPFLVSVPLSTIINWEREFETWAPDFYCITYVGDKDCRAVIRENELTFEEGAVARSGRV
SKIKSNSIKFNVLLTSYELVSIDSACLASIDWAVLVVDEAHRLKSNQSKFFKVKKLHEMLGPHMLRRLKTDVLKSMPSKS
EFIVRVELSPMQKKYYKYILTRNFEALNPKGGGQQVSLLNIMMDLKKCCNHPYLFPAAAEEAPLGFHGQYDIQHLTKCKY
F
Swiss-ProtChromodomain-helicase-DNA-binding protein Mi-2 homolog
KEGG     K11643  CHD4, MI2B; chromodomain-helicase-DNA-binding protein 4 [EC:3.6.4.12]     
SUPERFAMILYSSF54160  Chromo domain-like superfamily     
Gene3DG3DSA:2.40.50.40     
PfamPF00628  PHD; PHD-finger     
SMARTSM00487     
ProSiteProfilesPS51192  HELICASE_ATP_BIND_1; Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile.     
ProSitePatternsPS00690  DEAH_ATP_HELICASE; DEAH-box subfamily ATP-dependent helicases signature.     

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