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Gene detail [Fasta]

Species Dendroctonus ponderosae
GeneDPO004781
PositionSeq_1102996:446810..456312[GBrowse]
sequence mRNA:
>DPO004781-RA
ATGTCCGCCGACACTTTCTATGTTGTATTTACTGTGCATCTAGAATTTACTGGCGGCGGTGTTAAAGCGCCGCCAGGCTG
CGTGTTTGTCAAAATTTCCCTTCTGCGCTGCCAGGATCGCTCTGGAGACGGCCTGGGGCTACCAAACGACGTCACTCACT
TGGAGCTGAAGAATGTCACCGAAGCGAGCGTGAACTTGAGGTTTGTGAGACACTTGCAATGGACCCAAAGTGGTCTCAGT
CACGTGAAGGAACATTTAGTCAATCCCGAAGGTCTGCGGACGATAGACTTAAGCAAAAATGCCATACGCGACTTAGAAAA
TTACCAGTTCGATAACTACACTAGTCTAGTTCACATGAATCTCTCATTCAATAATATCACGGACTTGCCACGATACGTTT
TCAGAAATCAGAAGCTTAAAACGCTTAGTCTTAGCCACAACCATTTGCAGGCGCTGCCATTTCAGGTAAGAATGAGCAGA
ATGGCAACCATCCAGGTATTCGCTATGGAGCACATGACCGAACTAGACCTAAGCTACAACTACCTCGCCACCTTCCTAGA
CCATTTCTTCAAATTCAACAAATACATCGAAATCTTGCTCCTGAACAATAATCGCATCGCGAAACTAACCTCCAATGCTT
TGGCTGATCTTACCGATCTGAGAAGGCTGGACTTGAGCAACAACGCCTTGGGCCACATCGCCAAAGGCTTGTTCGACTCA
CTCAACAAGCTGGAGTACTTAAACTTAGCCTACAACCCTCTAACGACTTTGGCCAGCGGAACTTTCAGAGGCTTGAGGAA
CCTCTTGGAGCTGGACTTAAGCGGCAATAAATTTACGCATTTGACTTTCGGACTGATGCACTTTAGTCAGCATTTGTTGT
CGCTGACTTTGGACGACACGGCTATTGAGGAACTTCACAATTCTGAGCTGCTCGGAGTGCCGTCACTGAAAAATCTTTCA
TTGAGAAACAACAAAAGACTGAGGGAGATGGAGAACTATGTTCTGGCTGATACGCCAGTACTGGAAGTTTTGGACATTAG
CGGAAACGCCTTGACGTATTTGCCGTCCAGTGTTAGCAACTTGACCAGCAAATCGCCTCTAAAAATGCAAGCAACTCGGG
CTTGGAAATCGTCAGAAAGAAATTCTGTTCTCCGATTCTCATCGCCGGTTTCAAGCAATGACCGTAAACGTCCAACTCTT
TTGATAATACTGATGATGATGGTATTTTACTGCAGACTGCGCCACCTAAACATCTCAGAAAACCCATGGGCGTGCGACTG
TCGGATGTACTGGTTTGCGGGGTGGGCAGAGGCGCACCAGAACATCACAAAGTCTGAACTGACCTGCGGCCCCGACGCCT
ACCCGAATGATATGCTGCCCACCCTGCACCACTTGAACTGCACCAGACCACAGATTGTCTTCAAGACGCCCACCCAACTG
TACAGACTCAGAGCGGACGCTTTGTTGGAGTGCAGATATTCAGCCTACCCTCCTCCGTCTATAACTTGGATCACCCCGAA
ACGGGAAGTGTTCCATTGGAACCCCGATTCCGGAATTCCGGATATCTTCAAAAAGCACCCGTATGCTCATGATAACTACA
TGACACCGTTGAGAATTATTCCACCTAGAATCCAGGTGTTGGACAATGGGACCCTTTGGATTCGTAACGTAACACGCAGC
GATTGTGGCCGATATTACTGCTACGCAAGCAATCCGGTAGCCAACCATACCGAAGATGTACTGTTACATATCGACCCCAC
AGATTGGAACCATATCCGCATTGTGAGCCTTATTGTAGGCACACAAAGCGCCAGTGGATTCCTAGGGCTCACGATCATCG
TTCAGTTCCTACGTTATATACTCAATAACTTCTGCAAACGCGACAAGGTGTCGCCAAGGGCAAGGCAAATCTACGCCATG
CTGGATAACATCGAGCAATACAAGTCGCAGCAACTGGAAAAGTTGCGAGAAAACTACACACAACAGGTTAATCGAATCAA
AGACAATTGTGCACAGCAAATGGAATGGATCCAGGGCAGCTACCAAGCGCAAACCAAACACCTGAAAGACTTCCGGGACA
TTGGAAGCCAGCATTTGTCGACTTTGAGAGGCCAATATTGCGACCAGAAGTCTGAAGTTACAAAGACGCTGATTCTGTTC
CAGGTGAGGAAAGTTCGCGACTATTCCACCAGCCAGCTGAATTGGGTGCGCGAGAACTACGTCTTCCAACGTAACAAAAT
CCGCAAATTCAGCGCCCACAAAGTGCTGCAGCTCCGTGAAACCTACAAGTACCAACAGCAGACGCTAAACAAAGTTCTGG
AAAACCTTCCTAGTTTGTATTTCGAAAATTGCCGAGCTGGCACTTGTGGACGGGCCGAGAGCTTGGTGTTTGATCCAGCT
GATTTGGAAAGCGTCGATTTCTACATTAAAACGAAAATCGAAAAGCTGAGCAACTTGGATGAAGGAGATATGGAAGATAT
GAACCAGAGTAGATTGTCGCTGTATTACACGCCTACTGAGCGGTCGTTGGGTTCGAAAGTGTTGTCGCCCACAGATGACG
TTCTAGCCGGAGTTCACATCAACTACATCGAAAACAGGCCCGAAATGCCGATATTGGAAGGGCCTTCGACCTCCCAAGGC
GCTTATGTGAATCCTGAAAGTCCAGTGCGCGAAATTATGGACGACTCGGTTAGTGTGAACATGTTGCCTGATGATGCCGA
ATTTGTGCAAGTGATTACAACTAGTAGCAGCTCGCAGAACTTGCAAATTCTGAATGGAGACATCCCAAAACATGTCGAGA
ACAATAGAGTGACTCATGAAACATCTTTGTAA
PEP:
>DPO004781-PA
MSADTFYVVFTVHLEFTGGGVKAPPGCVFVKISLLRCQDRSGDGLGLPNDVTHLELKNVTEASVNLRFVRHLQWTQSGLS
HVKEHLVNPEGLRTIDLSKNAIRDLENYQFDNYTSLVHMNLSFNNITDLPRYVFRNQKLKTLSLSHNHLQALPFQVRMSR
MATIQVFAMEHMTELDLSYNYLATFLDHFFKFNKYIEILLLNNNRIAKLTSNALADLTDLRRLDLSNNALGHIAKGLFDS
LNKLEYLNLAYNPLTTLASGTFRGLRNLLELDLSGNKFTHLTFGLMHFSQHLLSLTLDDTAIEELHNSELLGVPSLKNLS
LRNNKRLREMENYVLADTPVLEVLDISGNALTYLPSSVSNLTSKSPLKMQATRAWKSSERNSVLRFSSPVSSNDRKRPTL
LIILMMMVFYCRLRHLNISENPWACDCRMYWFAGWAEAHQNITKSELTCGPDAYPNDMLPTLHHLNCTRPQIVFKTPTQL
YRLRADALLECRYSAYPPPSITWITPKREVFHWNPDSGIPDIFKKHPYAHDNYMTPLRIIPPRIQVLDNGTLWIRNVTRS
DCGRYYCYASNPVANHTEDVLLHIDPTDWNHIRIVSLIVGTQSASGFLGLTIIVQFLRYILNNFCKRDKVSPRARQIYAM
LDNIEQYKSQQLEKLRENYTQQVNRIKDNCAQQMEWIQGSYQAQTKHLKDFRDIGSQHLSTLRGQYCDQKSEVTKTLILF
QVRKVRDYSTSQLNWVRENYVFQRNKIRKFSAHKVLQLRETYKYQQQTLNKVLENLPSLYFENCRAGTCGRAESLVFDPA
DLESVDFYIKTKIEKLSNLDEGDMEDMNQSRLSLYYTPTERSLGSKVLSPTDDVLAGVHINYIENRPEMPILEGPSTSQG
AYVNPESPVREIMDDSVSVNMLPDDAEFVQVITTSSSSQNLQILNGDIPKHVENNRVTHETSL
Swiss-ProtLeucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 1
SUPERFAMILYSSF48726  Immunoglobulin superfamily     
Gene3DG3DSA:2.60.40.10     
PfamPF07679  I-set; Immunoglobulin I-set domain     
SMARTSM00082     
ProSiteProfilesPS51450  LRR; Leucine-rich repeat profile.     
CoilsCoil

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