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Gene detail [Fasta]

Species Dendroctonus ponderosae
GeneDPO006944
PositionSeq_1102669:1568753..1576624[GBrowse]
sequence mRNA:
>DPO006944-RA
ATGTCGGCACTAAGTGGACATATTGGGCGCAGTGCAACGATCCTGCAGAACCTGAAAGGGCACACGAGCGACGTTAATTG
TTGCGATTTTGCGCCTAATTTTACACTGGTTACCGGATCAAGTGACAAAACCGTGAGAGTGTGGGACTGGATCAGCGGCT
CTGGATATGTGGAACGTCCGCAATCTCCGCTGAGAGTCCACAAGTACCAAGTGACTTGTGTGCGGATTTCGCCTCATGGT
TCCATGATGGCGTCATCATCAGTCGATGGTACCGCTTTGCTTTGGAACCTGCATTCCCTCACAAAACTGCATACGATGAC
TCAGGTCAATGGCGATGCCATCAGAGTGTGTAGCTTTTCACCAGATAGCACCTTACTGGTCACTGCAGGAGACAATGGGG
CTGTATGCATTTGGGATTTGGTCCATCGATCTTTGATCAGGACTCTTTTTGAGCACGAAGGAACCACACAAGCTCTGGTT
TTCACCCCAGATTGCCAGTTTTTGGTCACCGCGTGCTCATTGGAAGTAGTCAAAGTGTGGCACGTTCAAGACCTAATTGA
CACCACCACAGAAACACCGTGCAGCCCTTTAACTCGCATCGATAATATTCACGATATGGGAGTGTTTTCGATTGATATTT
CCAAACATATTGAAGTCGATGAAAACAACCCCCTGATTCGATATTACAGTATGGCAAGTGGCGGCTGTAACAACGAACTG
AAACTTTGGACAATCAGATCGAGAGTGTCGGCAAAAAATAAAAATCTCACCCACATCGAGGTATCAATTTGCCTAAGCAA
TGTGCTGGAGGGCCATGCTTCTTCAGTGACTTGTGTAAGGTTTAGTAATTCTGGGCGGTATTTGGTGTCGAGTAGCTTAG
ATAAATCGGTGAAGGTTTGGGACACTAACAAAGATTGCACATGTTTGGTAACCTTGTATGGCCATCAGAGATATGTTAAC
TGTGTGGCATTTTCGAAGGACTCTAACATTGTGGTTTCAGAAAAAATCGACGATATTTTCGAAGGCGGTGTGAATAGTTG
CTGTTTTAATGGAAAGGAGTTATTGGCCACTGGATCGGGACTGTTTAAAGTCGGGGAGGAAAACAACAACGTAGAAGAAT
TGGGTAATTCTCCATTGGAAGGTCACACTTATGCAATAAATCATGTAGAGTTTTCAAAGAATGGCGATAAATTAGCGTCG
TCCTCCTTGGATGGATGCACTTTTATATGGAACACCCAGACCGGCGAAAAATGTCTATCAGTCCCAAAAAACGGCTTATC
CATTAAAGTTTGCCGATTTTCCCCAAATGGCAAGTTCATAATTACGGGTGGAGACGACGAGAAAGCCGTCATTTGGAACG
TGGATACAATGGAAGCAATTTCCGTATTGGAGGGACACCTGGATACCATAACATCCGCCTGTGTCTCCCCCGATAGTAAA
ATCGTCGTTACAGCGTCTTGTAATGCCGATTATCGCGCTTGGGCGGTGGAAGCCGCAAAATGTCTCTACATTAAAGAAGA
TGCTCATGATGGTGGCATTCAGAGCTGCGATTTTTCCGACAATCTCGACCCCATACCGAACACCATATCGGATAGACAGT
ACTATTTGCTGGCCACGTGTGGAAACGATAGTTTGGTGAAACTTTGGAGAATCAGCGTCGAGAAGTTGAACAGCGTGGTG
AATATCGAGGTGAAACAGTGGCGCTCACTGCAGGGGCATGGAGGCAACGTGATCTCCGTCAGGTTCTCCCCAGTGGTAGG
AGAGATTGTTTGCTCTACCGCAACGGATAGACAGTCCAGATTGTGGGCAGTTTATGGAGGGCATTGCCTTTATGTGCTGG
ACCACGACTCAATAGTGACTTGCTGCTCATTTAATTCCGATTGCTCACTACTGGCCACTGGGTGTCTCGATAGGACTTTA
TGGCTTTGGAAACTTCCCCAACAACTGACAGCCATTGCGAATAAAATGAAAAGCCGCTCTAAAACAGTAGCAGAATGGTC
TAATAGAGATGTGATCAAATGGCTGGCCGAGATCAGCATGAGCAAGATTGCGCAAAATGTGAGGAATTCGGGATTAAACG
GGGAAAAACTCATTACTTTAACCGAGGTTGAAGTATGTTCCGGCCTGGACTTGGATGAAGAAACCTCGAAAGTAATGATG
GAAGAACTGAAGTGGCTAAAGAAACTCCAGCTAGACATCCAGGCGTTTTGCACCGTCGATATTCCCCATGAATTCTTATG
CCCAATTACTCATGAAATTATGCGTGAACCTGTTAGGTGTTCGGACGGGTTTACATACGAAAAAAACGCCGTCGCTGAAT
GGTTCATGTCCGGAAAATATACCAGTCCCATGACTAATGCGGTTCTCACAAATACGACCCTGATTCCTAACTTGGAACTG
CGTGACTCAATTAGACAGTTTTTGGAGAGCGCCGAAGAAAAGGAGTAAAAAACTGGGTTTCTTCACTGCTGTTGTATAAA
TCATCCTTACGTGCCTTTGGTAAAACCTTTGGAGTAAGTAAAATAAGATATTTTATTTTCTCTATGGGTACAACGACTTC
AATCTGGGCATCCAAGCAGATAGCAGCTGGAGTCCGGTAATTGTTGAGACTGTTAAATCATCTGCAATATACACTGAAGC
TTGTTGCCAACCAATAGCATTTTTCTCGCACCTTACTACTTAATATATAGATATTTACCTACGCACTTTTTCGACTTATA
CACCTTGATATTGAAACCTATATTCTTATAATTATTATACGCTTGTTTTTCACCGGTTTCTTTGCGTTATTTGATACAAG
AGTCAAAATCTGTGATATTTGTATGTTGTATAACTATTATTTCTAAATAAACTCATTGTTTGTTC
PEP:
>DPO006944-PA
MSALSGHIGRSATILQNLKGHTSDVNCCDFAPNFTLVTGSSDKTVRVWDWISGSGYVERPQSPLRVHKYQVTCVRISPHG
SMMASSSVDGTALLWNLHSLTKLHTMTQVNGDAIRVCSFSPDSTLLVTAGDNGAVCIWDLVHRSLIRTLFEHEGTTQALV
FTPDCQFLVTACSLEVVKVWHVQDLIDTTTETPCSPLTRIDNIHDMGVFSIDISKHIEVDENNPLIRYYSMASGGCNNEL
KLWTIRSRVSAKNKNLTHIEVSICLSNVLEGHASSVTCVRFSNSGRYLVSSSLDKSVKVWDTNKDCTCLVTLYGHQRYVN
CVAFSKDSNIVVSEKIDDIFEGGVNSCCFNGKELLATGSGLFKVGEENNNVEELGNSPLEGHTYAINHVEFSKNGDKLAS
SSLDGCTFIWNTQTGEKCLSVPKNGLSIKVCRFSPNGKFIITGGDDEKAVIWNVDTMEAISVLEGHLDTITSACVSPDSK
IVVTASCNADYRAWAVEAAKCLYIKEDAHDGGIQSCDFSDNLDPIPNTISDRQYYLLATCGNDSLVKLWRISVEKLNSVV
NIEVKQWRSLQGHGGNVISVRFSPVVGEIVCSTATDRQSRLWAVYGGHCLYVLDHDSIVTCCSFNSDCSLLATGCLDRTL
WLWKLPQQLTAIANKMKSRSKTVAEWSNRDVIKWLAEISMSKIAQNVRNSGLNGEKLITLTEVEVCSGLDLDEETSKVMM
EELKWLKKLQLDIQAFCTVDIPHEFLCPITHEIMREPVRCSDGFTYEKNAVAEWFMSGKYTSPMTNAVLTNTTLIPNLEL
RDSIRQFLESAEEKE
Swiss-ProtWD repeat, SAM and U-box domain-containing protein 1
SUPERFAMILYSSF50978  WD40 repeat-like superfamily     
Gene3DG3DSA:1.10.150.50     
PfamPF04564  U-box; U-box domain     
SMARTSM00504     
ProSiteProfilesPS51698  U_BOX; U-box domain profile.     
PRINTSPR00320     
ProSitePatternsPS00678  WD_REPEATS_1; Trp-Asp (WD) repeats signature.     

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