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Gene detail [Fasta]

Species Dendroctonus ponderosae
GeneDPO007044
PositionSeq_1102669:2985311..2999899[GBrowse]
sequence mRNA:
>DPO007044-RA
ATGTTTCGGCTTCTCCTGCTGGCAGGTACAGTTGCATATTCATCGGCTTTCCTGGATAGCTTAATGAAGGGACGCAGCAA
CTGTTCCATATCCCAGTTTCAATGCAGCGACAATCGCTGCATCGCGGTGCAGGCCCAATGCGATGGCAAGAACGATTGCG
GCGATTTTAGCGATGAAAAGGATTGTGATTTTATTCTATGCAGAGAACCCAGCTTTTTCCGCTGCAAAAACCGTCGCTGT
ATCGCCAAATTGTTCGTGTGCGATCGGGAAAATGACTGCGAAGATTTTTCCGATGAGTCAGATTGCGACTATTTCAAACT
GGAAAATTTGGCAACCAGCACATGCGGAGCGGGCGAATGGCAATGTACGGACAAAATCTGCATCCCGGAAGAATGGGTTT
GCAATCAGGAGATTGACTGTTTGGATGGTTCCGATGAAGGTGTCGGATGCACCATCAACGATCATGAATGCGACGGCTTT
CGTTGCACAAACAATCGTTGCATCCCCAAAGAGTGGCGTTGCGACACTCACGATGACTGCAGCGATGGAAGCGATGAGCG
CGACTGCGAACACCATTTCGACCCCACGCAATGCACTCTGGACCAGAAAAAGTTCCTTTGCTTGGACGGCAAAGCCTGTG
TGGATCTCACAAACGTCTGCAATGGTCGGAATGATTGTCTCGATAAATCCGATGAAGGGCCGCGCTGCATTTGTCCTGCC
GGCTACCACAATGTCAACGAAAAAGTGTGCATCGACATCAACGAGTGTGAAGAGTATGGCATTTGCGACCAGCACTGCCG
GAACTCGCCCGGATCGTACGAGTGCTTCTGCGAGCACAAATACATGCTGCAGGAAGACAAGCGGACTTGCAAAGCGATCG
GGGGCGAGGCCACGATGATATTCAGCTCCAAAACACAAATTCGCTCATACCTGCTGAACAGCGACCTGCTGTTCTCGATT
GCCAACAATCTGAAGCAAGTGGTAGGAGTCAGTTCTGATGGCCAGCACATCTACTGGACGGATGTGCAAAGCGAGCACGA
AGCCATCGTCCGCGCCTCAGAAGACGGATCAGATCGAGAGGTAAACCCTTCCATCACCCAAACAACTCATCATCAGCTCC
CATCCACTTTTCAGGTGATTGTAACGTCGGGCCTGGGCCTTCCGGAAGACCTAGAAGTCGACTGGCTCACCGGAAACATC
TATTTCACGGACGCTCAGAACCGGCATATCGGCGTCTGCAATAACGACGGCTCTCATTGCACCGTTCTGATCAACAAGGA
CATCAGAAAACCACGTGGCATTGCGCTGAATGTGAACGACGGAACGATGTACTGGACCGACTGGGAAAAACCTGCGGAAA
TTGCCACTGCTCAGATGGACGGAACCAATGCCATGCCATTTCTTCGCGATGATATTGGCTGGCCCAATGGGTTGGCTTTG
GACTTTCCCAACTCGCGTCTCTATTGGACGGATGCCAAGAAAATGACTCTGGAAAGTATTCGATTGGACGGCACTGATCG
AAGAGTGACAATGTTTCAGGTAATTCTCAAAGACGTCGTAAGGCATCCGTTCGCTATTGCGGTGTTCGAAGACAAAATCT
ACTGGTCGGACTGGAACACGCACTCCATCGATTCCTGTGAGAAATTCACCGGCAAGAACCATCACACTCTGATCAAAGAG
TCGAAGGACTACATTTACGGAATGAGCATTTACCATTCGGCTTTACATAAGAGAATTGAGAATCCGTGCGCTTCCGCTTT
CTGCAGCGACATTTGCCTTCTGAACGGAGTCAGTTACTCGTGTGCCTGCTCAGAAGGACGATTGCTCCATTCAGATAAAC
ACACTTGCCAAGCGATGGAAAAGCGGCAAATGCTCGTGTTGGCAGCTGGAAACGCCCTCTTAAGCATCGAGCATAAAACG
CTTGGGAAGCATTCGCTGACCGTCTTACCATCAGTGGTGGCTGACGCGGGAGCGCTGACTTACGATGGGCGCAACCACAG
CATTTTCATCAGCGATCTGACCAAAAAGAGCATTGTGGAATTCAACTTGCACTCGCACAGTCGCACCACGCTGCCAATCA
AGGGGCTGGAAACCGTCGTTTCCATGGACTTTGACTCAGCGAGCAACAACTTGTACATTTGCGACAGCGCAAAGTCCACT
CTGGAAGTGGTCAGCTTAACCACCATGGCCCACAAGGTGCTGATTTATGGGGCCGAACATGAAGTGCCCCAATCGGTAGC
GCTGGTTCCCCACGACGGTCTCATGTTCGTCTCGTTCTACGACCAGAGGAAGGAACAGTCGCACATCGACCGGATGTCCA
TGGACGGCACTGGACGCACTCACATCACGGAACAGGATCTGAATGGACCGGTCAAGTTGCATTTCGACTCTCATTTTAAT
CGGCTATTTTTCGCTGATGCCGGCACTGGAGTTATCGAGCATATCAACATCGAT
PEP:
>DPO007044-PA
MFRLLLLAGTVAYSSAFLDSLMKGRSNCSISQFQCSDNRCIAVQAQCDGKNDCGDFSDEKDCDFILCREPSFFRCKNRRC
IAKLFVCDRENDCEDFSDESDCDYFKLENLATSTCGAGEWQCTDKICIPEEWVCNQEIDCLDGSDEGVGCTINDHECDGF
RCTNNRCIPKEWRCDTHDDCSDGSDERDCEHHFDPTQCTLDQKKFLCLDGKACVDLTNVCNGRNDCLDKSDEGPRCICPA
GYHNVNEKVCIDINECEEYGICDQHCRNSPGSYECFCEHKYMLQEDKRTCKAIGGEATMIFSSKTQIRSYLLNSDLLFSI
ANNLKQVVGVSSDGQHIYWTDVQSEHEAIVRASEDGSDREVNPSITQTTHHQLPSTFQVIVTSGLGLPEDLEVDWLTGNI
YFTDAQNRHIGVCNNDGSHCTVLINKDIRKPRGIALNVNDGTMYWTDWEKPAEIATAQMDGTNAMPFLRDDIGWPNGLAL
DFPNSRLYWTDAKKMTLESIRLDGTDRRVTMFQVILKDVVRHPFAIAVFEDKIYWSDWNTHSIDSCEKFTGKNHHTLIKE
SKDYIYGMSIYHSALHKRIENPCASAFCSDICLLNGVSYSCACSEGRLLHSDKHTCQAMEKRQMLVLAAGNALLSIEHKT
LGKHSLTVLPSVVADAGALTYDGRNHSIFISDLTKKSIVEFNLHSHSRTTLPIKGLETVVSMDFDSASNNLYICDSAKST
LEVVSLTTMAHKVLIYGAEHEVPQSVALVPHDGLMFVSFYDQRKEQSHIDRMSMDGTGRTHITEQDLNGPVKLHFDSHFN
RLFFADAGTGVIEHINID
Swiss-ProtPutative vitellogenin receptor
SUPERFAMILYSSF63825  YWTD domain superfamily     
Gene3DG3DSA:2.120.10.30     
PfamPF00058  Ldl_recept_b; Low-density lipoprotein receptor repeat class B     
SMARTSM00179     
ProSiteProfilesPS51120  LDLRB; LDL-receptor class B (LDLRB) repeat profile.     
PRINTSPR00261     
ProSitePatternsPS01209  LDLRA_1; LDL-receptor class A (LDLRA) domain signature.     

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