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Gene detail [Fasta]

Species Solenopsis invicta
GeneSINV17800
PositionSi_gnF.scaffold04103:1309018..1320181[GBrowse]
Ant Genomes Portalhttp://hymenopteragenome.org/cgi-bin/gb2/gbrowse/sinv_10/?name=SINV17800
sequence mRNA:
>SINV17800-RA
TCTTCTCTTTTTCCAGAGCTGTACTTCCTGATCGCCAAGTTTCTCGATGCGGGTATCTGTCCGGAGGCTGCGAAGGTGCT
GAAGCGGGAATTGGAGCATTTTAGATCATGCTTCTGTTCGCAGGTACTGCCCTCGCGATTTGACTGGGAAGGCAACGTCC
ACGCTCAGACTTTTGAAGAGCTGGAGAAGAGATATCCTCACATTGGGTCGAATTATTTGTTGCAAATATGTGCCAGAATA
GGACCAGTGTTAGAGAAAGAAGTGCCACCATGCGTTCGTGGAGTGACATCACTTTTGGGAGCAGGCAGACAATCCATGCT
ACGTACCCACGAAGATATTACAAATCGTACATGCAGCATTGTCGATTATTCTGGAAGATTCGGTGGAAAACCTTTCTTGG
AGTTGCCCGGTAGTCTGTCAGTACCTAATATAGCGGATGATTTACTCGTCAAAGTCTGGAGTTCCGTTGATGGACGTTTA
CTCGCCACTTTTCGAGGCGCATCAGCAGAAATTATGGACATAGCCGTGAATTTCGATAATACTCTGTTGGCAGCGGGAAG
TTTAGATCGAATAATACGGGTTTGGTGTTTCCAATCAATGTCACCTGTGGCAGTTTTAACCGGGCATTCAGGCATGATTA
CGTCCATCAATTTTTGTCCAATAGTGTGTAATAACGTTTACTATTTAGTCTCTACCAGTACTGATGGATCCGTAGCTTTT
TGGTCTCACACAAAGAAACCGAACGAGAGACCAGTATTTCAAACGAAGCCTATTCAATACCATGAGAAAATGAGGCCCGG
CCAATCGCAAATGATATGTGCCTCTTTCAGTCCTGGCGGCGCATTTATGGCTGCCGGCTCTGCGGATCATAACGTAAGAG
TTTACGCGATGTTAGGGGACGAAGGACCACGCAGAGTCCTTGAGATTGAGGCGCATTCTGACACAGTCGATAGTATTCAA
TGGGCGCACAGCGGCTTAAAATTTATTTCTGGTTCTAAAGATGGTACTGCAAATGTATGGCATTTCGAGCAACAGCAGTG
GGTACATACACAATTGCTCATGACGACAAAGCTCCCTGGAGAACCAGAAATGGATCATGATACTAATAAAAAAGCGAAAG
TAACCATGGTTTGTTGGGACGTGAGCGATGAATTTGTTATAACGGCAGTGAACGATTACACATTGAAAGTGTGGAATGCA
AAATCGGGAGAACTGGTAAAGGTTCTGCGAGGACATAAAGACGAAGTTTACGTGTTGGAATCACATCCAATAGATCCTCG
AATGATTCTTAGTGCTGGTCATGATGGACAACTTATCATTTGGGATGTATTGAATACGGAACCAATGATTTGTTTCCAAA
ATTTTGTTGAAGGCCAGGGAAATTGTGCTATTTTTGATGCAAAATGGTCACCTAGTGGCACGAAACTTGCCGCGACAGAT
TCTAACGGTCATCTCTTGATGTTTGGATTTGGATGTGGAGGCGAGAAATTGAAAAATATACCGAAAGAATTATTCTTCCA
CACGGATTATCGACCTTTGATAAGAGATGGAAATAATTATGTTCTCGACGAACAAACACAAACGGCTCCGCATTTAATGC
CGCCACCATTTTTGGTTGATATAGATGGAAATCCATATCCGCCAGCGTTGCAGAGATTGGTGCCAGGAAGAGAGAATTGT
AGAGGCGAACAATTGGTACCAAATATTGCAGTTGGTGCAGGCGCGGATGGAGAAGCGGTCGTTGCCGGTGCCGGCGAAGA
TAGGGAGAATAACGCCGCAGAACAACCAATTCGTCAAATAGCGAGTCCCCGTGGAAGTAGAGCTGGTTTGAGGAGAGAGG
GCAATGTTGAAGCGACGTCCGATATGGAGTTAGAAAACTGGCGGCGAGAAATGCGACGGCGACCACAGCCTACCTCGAGC
ACTGCCACTAATCAAGGCAATACAGGAAATAAACTCGTAAATCGCAAGCGTAAAATTACTAGGCACGGTTATAGAACTAG
AGCAACGCGCGATGAAGAAGAAGAGGATGATGACTTTGAGAACCTTGATAACGCTGACACGGTGAGTTCAGTCAGTAGCA
ATAGCAACGATTCTACCGCCCACGAAGAGGATATGTGCTCCGATAGTACTACAGAATCCAGTACTGAGTATTCCGATTGG
ATCGCGGATCACGGATTAAATTTGGAACCGCCCAAACGTAGTAAACGAAAACCCAGATTACCAATAGCTAATGGTATTAA
TGAAGTTCCTGAAATTTACCGACCTTCAGAATGGCTTACTGAAGTAATACCGAGGAAAGCCCCTTATTATCCACAGATGG
GCGACGAAATAGTATATTTCAGACAAGGTCATAAATTCTATTTAGATGCAGTTAGGAATAAAAAGATTTATGAGCTTAGT
CCGCGGTGCGAGCCATGGACCAAGATAAATATTAGAGCACAAGAATTTGTAAAAGTAGTGGGTATTAAATACGAAATACG
ACCACCTCGTTTGTGCTGCTTGAAATTAGCTTTGATGGATGAGGACGGTCGGCTTACTGGACAGAATTTTACCATCAAAT
ATCACGATATGGCCGATGTATTAGATTTTCTAGTGTTGCGTCAAACCTTTGATATGGCGTTAGCACGAAGTTGGTCTGAA
GGTGATAAATTTCGTTGTATGATTGACGATGGTTGGTGGATGGGACAGATCGTCGGAATGGAACCATTAGACGAAGAATT
TCCGGAATCATTGTTCATGTGCTTTCGCGTCAGATGGGATAATGGGGAATATGAACGAATGAGTCCTTGGGATCTCGAGC
CTGTGGACGAAGATAGAATACCTATGGAACTCGGTGGTGCTGTTCCCGTTTTACCAGAGGAGAGACAGGCGATACTATAT
CAACCTCACGCAGAAGAGTGGCCCATGGGTGACAGAGAAGCGACTTGTCGTCGAATTATACGAGGCTTGGATCAAGTAAT
GAGTCTTGCAATCGCAGAACCATTCGTCGTGCCAGTAGATCTCAGTCTTTATCCAACTTATGCTCTCATTGTGGAGTATC
CAATCGATTTATCGACTATAAAAGCTCGTTTTGAGAATCATTTCTATAGAAGGATTACGTCGGCACAATTCGATGTTAGA
TACTTAGCAACGAATGCCGAACAGTTCAACGAACCGCACAGTCACATAGTGAAAAAGGCGAGAATAGTCACCGACTTATG
TCTACGTATAATAAAGGAAACCATCGATGTAGATGTTGCGGCAGTATATCATCAATTGAATGATACATACCATTCTTCCG
AGTCAGAGGTAGAAAACAGACCCTCAACAAGTAGATTGAGATCCACGAGGAAAAAGAATTTATATGCGCAAGAGTTTTCG
CAAGATTGGAAACTGGCGTGTCGACAATTGTTGGAGACCTTGTGGCAATGCGAAGACTCGATACCTTTCAGGGAACCGGT
GGATAGATTAGAGCATCCAGAGTATCATCAAATAATAGACACACCGATGGACTTACGTACTGTCAAAGAAGATTTATTAG
GTGGTAATTATGAAGTGCCAGCAGAATTTGCAAAGGATATGAAATTGATATTTACAAATAGCAGAAATTATAATACTAAT
AAACGTTCAAAGATATATTCGATGACGATAAGACTGTCAGCCATGTTCGAAGATCACATGCATAGAATACTCTTAAATTG
GAAATCGGCGCGTAGACGAAATAAAGATAAAAATAAAGATAATACGAAACCAAATAAGAATAAGAAGGCGAAAGCAAAGA
AGAAACCGAGAAAGAAACCTAGATTAAGTAATGGCACAGGACCTTCCAAATCAAAATCTGCTCCTAGCGACGATGATGAA
GACGATGTAGACAGTGAGGACGATGATGACGATGATGACGACGACGAGTCGGGTAAAGAGCAGAAAAAGAACAATTTTGA
CATATCTGCACCTGGACCGTCTCGGATGACAAACGGTCACATAAAGCGGTCTAATTCCGTTCCATCTCGGCCATCGCTAA
AATTGCGAATCTGTCGTTCGAACGTGTCAAAAAAACCGAAGGATAGTGATAGTGATGCTAGTGAATCGGAGGTAACGTCA
GACACTGACAGCAGTGACAGTGCTCCTGTCCGAAGGACTCGAGCGATGACGGCGATACCCAGTGTTCATGCTGATACCGA
TTCCGGAGACGATTACACGCCCGGTGGTCGCAAAAAACAGGTTCGCAAAAATCGTGGTAAAAATATTAAAAACGGTAAGC
AATCTAAATCTAAAGTAAAATCCAACGTTATCGCCGACGACGATGATGATTACATTGCGGAGAATCAAATAAACGAGGAC
AAAGGAGAGGAAGAGGAGGAATTTTTTGCACCGAATTCTACGGAAGAGGAGAGCGAAGAAGAAAAATTCATCAAAAGAGA
CACTAGATCACGAAAGTTAGTGACCGATAGCGCGCAGTATACTGCTAACAATGGGACGAACGATAATAGCGATAGTGAAA
GCGAAGAAAACGACGATGAAGAACAAGAACAGGAAGAAGGAGAAGAGGACGAAGAGGAAGAGGAACAACAGCAGCAATTA
CAAAGTAAGGCTAATAATCAAGACTCGGAGGACAGTGATTATTGCTACAAAGGATTCAGATCATCGCGTTTAAGTCGTCG
GAAGCAGAACAGTTTTGTAGATTCGGACATGAGGCAGCAGCATAGCAGTAGGCGATCCTCGGCTCGGAAGCGTCCCTGTT
ATAACGAGGATAGCGAAGATAACGAGGATAACGAAGATAACGAGGATAGTATCATGGTACCGGTGAGAAATCGGCGCAAG
ATTAAGCGTCGCTCGTACGCCGAGGATAGTGACGACGAAAACATGCCGGAGCCCGGCATCAGTATAAGTAGTCGAGGTCG
CATACGTAAAATGACACCGCGTGCCCGCGCTTACCTTCTAGAATCGCCC
PEP:
>SINV17800-PA
SSLFPELYFLIAKFLDAGICPEAAKVLKRELEHFRSCFCSQVLPSRFDWEGNVHAQTFEELEKRYPHIGSNYLLQICARI
GPVLEKEVPPCVRGVTSLLGAGRQSMLRTHEDITNRTCSIVDYSGRFGGKPFLELPGSLSVPNIADDLLVKVWSSVDGRL
LATFRGASAEIMDIAVNFDNTLLAAGSLDRIIRVWCFQSMSPVAVLTGHSGMITSINFCPIVCNNVYYLVSTSTDGSVAF
WSHTKKPNERPVFQTKPIQYHEKMRPGQSQMICASFSPGGAFMAAGSADHNVRVYAMLGDEGPRRVLEIEAHSDTVDSIQ
WAHSGLKFISGSKDGTANVWHFEQQQWVHTQLLMTTKLPGEPEMDHDTNKKAKVTMVCWDVSDEFVITAVNDYTLKVWNA
KSGELVKVLRGHKDEVYVLESHPIDPRMILSAGHDGQLIIWDVLNTEPMICFQNFVEGQGNCAIFDAKWSPSGTKLAATD
SNGHLLMFGFGCGGEKLKNIPKELFFHTDYRPLIRDGNNYVLDEQTQTAPHLMPPPFLVDIDGNPYPPALQRLVPGRENC
RGEQLVPNIAVGAGADGEAVVAGAGEDRENNAAEQPIRQIASPRGSRAGLRREGNVEATSDMELENWRREMRRRPQPTSS
TATNQGNTGNKLVNRKRKITRHGYRTRATRDEEEEDDDFENLDNADTVSSVSSNSNDSTAHEEDMCSDSTTESSTEYSDW
IADHGLNLEPPKRSKRKPRLPIANGINEVPEIYRPSEWLTEVIPRKAPYYPQMGDEIVYFRQGHKFYLDAVRNKKIYELS
PRCEPWTKINIRAQEFVKVVGIKYEIRPPRLCCLKLALMDEDGRLTGQNFTIKYHDMADVLDFLVLRQTFDMALARSWSE
GDKFRCMIDDGWWMGQIVGMEPLDEEFPESLFMCFRVRWDNGEYERMSPWDLEPVDEDRIPMELGGAVPVLPEERQAILY
QPHAEEWPMGDREATCRRIIRGLDQVMSLAIAEPFVVPVDLSLYPTYALIVEYPIDLSTIKARFENHFYRRITSAQFDVR
YLATNAEQFNEPHSHIVKKARIVTDLCLRIIKETIDVDVAAVYHQLNDTYHSSESEVENRPSTSRLRSTRKKNLYAQEFS
QDWKLACRQLLETLWQCEDSIPFREPVDRLEHPEYHQIIDTPMDLRTVKEDLLGGNYEVPAEFAKDMKLIFTNSRNYNTN
KRSKIYSMTIRLSAMFEDHMHRILLNWKSARRRNKDKNKDNTKPNKNKKAKAKKKPRKKPRLSNGTGPSKSKSAPSDDDE
DDVDSEDDDDDDDDDESGKEQKKNNFDISAPGPSRMTNGHIKRSNSVPSRPSLKLRICRSNVSKKPKDSDSDASESEVTS
DTDSSDSAPVRRTRAMTAIPSVHADTDSGDDYTPGGRKKQVRKNRGKNIKNGKQSKSKVKSNVIADDDDDYIAENQINED
KGEEEEEFFAPNSTEEESEEEKFIKRDTRSRKLVTDSAQYTANNGTNDNSDSESEENDDEEQEQEEGEEDEEEEEQQQQL
QSKANNQDSEDSDYCYKGFRSSRLSRRKQNSFVDSDMRQQHSSRRSSARKRPCYNEDSEDNEDNEDNEDSIMVPVRNRRK
IKRRSYAEDSDDENMPEPGISISSRGRIRKMTPRARAYLLESP
Swiss-ProtBromodomain and WD repeat-containing protein 1
KEGG     K11798     
SUPERFAMILYSSF47370  Bromodomain superfamily     
Gene3DG3DSA:1.20.920.10     
PfamPF00400  WD40; WD domain, G-beta repeat     
SMARTSM00297     
ProSiteProfilesPS50014  BROMODOMAIN_2; Bromodomain profile.     
PRINTSPR00503     
CoilsCoil
ProSitePatternsPS00633  BROMODOMAIN_1; Bromodomain signature.     

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