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Gene detail [Fasta]

Species Solenopsis invicta
GeneSINV20872
PositionSi_gnF.scaffold03171:316848..319689[GBrowse]
Ant Genomes Portalhttp://hymenopteragenome.org/cgi-bin/gb2/gbrowse/sinv_10/?name=SINV20872
sequence mRNA:
>SINV20872-RA
ATGAACGCGGGATACGATGAGGATCTGTCGGAGAATCGGTTCCTGCGGGAGCTCCGGGACGAACACGGGGCCACGTTTAA
GCGCGCTGTTGAGGAGAGCTGGATCGTCTGTGTTCCGCGCAGCGGCAGTTTCGCCAGTCGCAGGTTGCGGGAGGACGAGA
TCAACGCCCACATCCTGGTCCCCGGGCGGGACCTCTCCGTCGCTCGCTTCAATAGCCTGAGCGGCAAAGAGATTCTGCTC
AAGGACCGAGTCTTGCATATTGAACACGACGACGCGGAGCGATATTCCTCGCGCCTGCTCTTCGAGGAGATCTTCTACAG
CGATGATTTCCGTAAATGTTGTGTATGGTGCATTGAACGACCCTTGGAGGCTAGCATGTATGTTTGCGACAACTGTGTCA
GCGTGGTCACGAATCTCCAAGAAGCCATGAATTTTCTTCAAGCGGAATTGTTCGATAAGCAGCTGCGTGACGACTTTGAA
ACCAAAATTAAAGACTTTTTGTACATTAATAAGAATCTGGAGCGCAAATCGATGCAGGAGCATAGGGATCTGGTGCACGA
GCTGTATGCGGATTGTCTCGAGATGCTGGAGAACGCGACATCGAGGGAGAGTGCAGCCTCGAACAACAAGCAGTATCAAT
GGAACATTAGAATGTCGTTGGAAACATACATTCTGTATACTCTAAAAGACGTGCTACTAAAATCATTATCTGCCTGTACC
GCTGTTGAAGATGCAAAATTTAACAAAATTATCAGGAACTTGGACGGGATCGAACTGAGCGATCTCCGAGTGCGACCAGA
TCTGCAATCTCGCATCCATGGGGGAAAGATAGAGCTGTCGCGACTGGACTGTTTTGTGACTGTCTTGGGCAAGATCGAAT
GTCTTAGGAGGACCGTGAACTACGTATCCCACGGAACGTCGTCGTCCGTCACGTCGGACGATCTTCTGCCGGTGCTCGTG
TACCTCGTCGTCAACGCCGGCCTGCCAAACTGGATGGCGCAGTTATATTTCATGAGACAATTTCGTCTTTCCGCGAGCTC
CGCTCACGAGTCCGACGAGACTGGCTTCCTGATAACTTCGCTCGAAGCTGCGATCGTGCACATTAAGTCCGGAGTCATCT
ACGACGAGGACAAATGCGCAAATAATCCTGACAAATACAATCCATTAATGAGCCATTCGAAACATTCGTCCGACAGTTAC
TTATTCACCTGCGTCAAGAACGGTAATCTGTCCGAGGTGAAAAGGATTTTAGCCTACGACGGTTCCAAACAAGTCGACGA
CGTCACGCTTTGCCATCCCTTGTGCACTTGCGCGTCCTGCGAGCGAAACTGGACGAAGCAGCGCGACCTGAACATGTGTC
CTAAAGATGACAAGGGTATGACGCCGTTGCATGTTGCCGTGTTGCACGATCAGCTGGTGATCGTGGACTTTCTTCTCGAC
CGCGACACGGATATAAACGCCGTCGACTCAGATGGCATGACGGCCCTTCACTATGCCTGCGTCAAGGGCCACCAGAACAT
TCTGCTGCTGATGCTGCACGCAAACGCGGACTCAGCGGTGACGGACGCACGGGGAAACACGCCGTTGCACTTGGCGGTGG
ATCGCGATCACGAGAACTGCGTGAAAGCATTACTGTATCTGTCGGAGCACATGAGGATACCAGTCGGCGCGAACGTTGCG
AACGACAACGGCGACACGCCGTTGCATCTCGCAGCCAGGTGGGGATACTGTGCGATCGTCAGCATCCTTCTGGAGTACGG
TGTGAACAGCAGGACGACCAACAAGAAGGGTCAAACGCCGTCAACGGTGACGTACAGCGAGACCATCGCCGAGCTGCTGA
GATGTAATGCAGCGTCGGACGTCTGCAACGACGTCCCAGCTCTGTCCAAGCGACATACCTTCGTGCAGCAACCTCGGCAA
TCGGCGCCTTTTCAGCAACAGCAGCAGCAGCAACAGCGTCATTGGTCCACGTTGGAGAACAAAAGCCCGTCGCACTCTAA
GAGCTACACCAACGCGATGCAGCATCGTATGATGGACAAATTGCTCGTCGCCATCGTCGATGGTGACATATGCCTGGCGT
GTTACTACCTGGGGCTGGAGGTTTATCGCGAGCGGCCGCCGGGCGCCCGTGCGAGTCTGTGCCATCATCCGCTCTGTGAC
TGCGAGCGGTGCTCGGCAATCAGTGAGAATAAGCTGGAGTGCAAGCAGAGACAACGGGTACTCGCAATCAACGCTAGTAA
CAACCTTGGCGAGACGGCATTGCACGTGGCGAGCGCAACCGATCGCACCAAGATGGTGCAGCTGCTGCTGGACGCCGGCG
CGAACGTAAACGTAGTGACCAAATTGGAGAGTCGCACCCCGTTGCATTTAGCATGCCTCAATGACCGCGTCGACTCGGCG
AGGCTGCTGCTGAATTGCGCAACTTGCGACGTAGATGCCAAGGATCGCGACGGCAATACGCCGTTGCACCTGGCGACTGT
AGCCGGCAACATCAAATCCGTCGGCCTGCTAGTCAGATACGGTGCGTGCACCGGCGTGCGCAATTTGCAGAACAAGACTC
CGCTGCAGCAGGCGGAGGAGAAGCTATCTATCGCTTTCTCCGCAAATCGCGCAGGCATACTGAAGATTCTGAAACAAAAC
TCG
PEP:
>SINV20872-PA
MNAGYDEDLSENRFLRELRDEHGATFKRAVEESWIVCVPRSGSFASRRLREDEINAHILVPGRDLSVARFNSLSGKEILL
KDRVLHIEHDDAERYSSRLLFEEIFYSDDFRKCCVWCIERPLEASMYVCDNCVSVVTNLQEAMNFLQAELFDKQLRDDFE
TKIKDFLYINKNLERKSMQEHRDLVHELYADCLEMLENATSRESAASNNKQYQWNIRMSLETYILYTLKDVLLKSLSACT
AVEDAKFNKIIRNLDGIELSDLRVRPDLQSRIHGGKIELSRLDCFVTVLGKIECLRRTVNYVSHGTSSSVTSDDLLPVLV
YLVVNAGLPNWMAQLYFMRQFRLSASSAHESDETGFLITSLEAAIVHIKSGVIYDEDKCANNPDKYNPLMSHSKHSSDSY
LFTCVKNGNLSEVKRILAYDGSKQVDDVTLCHPLCTCASCERNWTKQRDLNMCPKDDKGMTPLHVAVLHDQLVIVDFLLD
RDTDINAVDSDGMTALHYACVKGHQNILLLMLHANADSAVTDARGNTPLHLAVDRDHENCVKALLYLSEHMRIPVGANVA
NDNGDTPLHLAARWGYCAIVSILLEYGVNSRTTNKKGQTPSTVTYSETIAELLRCNAASDVCNDVPALSKRHTFVQQPRQ
SAPFQQQQQQQQRHWSTLENKSPSHSKSYTNAMQHRMMDKLLVAIVDGDICLACYYLGLEVYRERPPGARASLCHHPLCD
CERCSAISENKLECKQRQRVLAINASNNLGETALHVASATDRTKMVQLLLDAGANVNVVTKLESRTPLHLACLNDRVDSA
RLLLNCATCDVDAKDRDGNTPLHLATVAGNIKSVGLLVRYGACTGVRNLQNKTPLQQAEEKLSIAFSANRAGILKILKQN
S
Swiss-ProtAnkyrin repeat domain-containing protein 27
SUPERFAMILYSSF109993  VPS9 domain superfamily     
Gene3DG3DSA:1.25.40.20     
PfamPF02204  VPS9; Vacuolar sorting protein 9 (VPS9) domain     
SMARTSM00167     
ProSiteProfilesPS50297  ANK_REP_REGION; Ankyrin repeat region circular profile.     
PRINTSPR01415     

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