Warning! We strongly recommend Internet Explorer (9.0 and later) and Google Chrome for better display.

Gene detail [Fasta]

Species Solenopsis invicta
GeneSINV20685
PositionSi_gnF.scaffold01426:1601903..1608943[GBrowse]
Ant Genomes Portalhttp://hymenopteragenome.org/cgi-bin/gb2/gbrowse/sinv_10/?name=SINV20685
sequence mRNA:
>SINV20685-RA
TTAACTTTTAGATTGGACCGACTATTCATATTATTAGAGACTGGAACAAACGCAGTTACCAAAAGAGCAGCTGCGCAACA
GTTGGGAGAAGCACAGAGATTACATCCTCATGATCTGCATCATCTATTAGCAAGAGTCTCTACCTTGTTAAAATCTCCAC
AATGGGATACTCGAATATCAGCAGCTCATGCTGTACAAGCTATACTTGCTCAAGTTCCATCTTGGGATCCACAGCCAATT
AAAAAAGAAAACTCTACAGATGAATCAGAAACGATTAAACGCAAAGCCTCCACTACCAGATTGAATTTAGAGTCTTTTGA
CATGAGCAGAGTTCTAGCTCGCAGTTCACATCTTACTGGCTCTGAGGGTAGCGAATATGATTTAACTATATCGGAAGGAG
AGCAGTTATCGCTTCCTAGTCAGCAAGAAAAATTAGCTGCAAAGCTAGGCCTTCATCCACGTTTGATGGGTGTTGATGAT
TTGTTTACCGTCGACGACCTTACCCCACAGACGCCATGTGCAACCCAACCTGCTACTATACCTATAGACGAAACTTTGAA
ACAACCAGGGGGCTTAAGCAGGAGAGAAATGAATAGAGCGAAACGCAAAGCGCGTCAGTCAGTGACAAAACAACGATCAC
GTGAACCAGATGATCATCGCACTAATGATGACCATTCAAATTCAATGAATGTTCAATCTCCAGTGAATAATATTGGTGAA
CCACCGACTAAAAAAGTAATACTAGAGGATATGATCTCAGATCCTGGATCAAAATGCGGCATATCTAATGAACAAGTAAT
CGGAGTACCAGATAGTACTGGATGTTGGCCAGATTCTCTGGTAGACTGGCCTTTAGAATCCTTCGCGGAAAGTCTTTGCC
AGGATTTATTTAGTCAGAAATGGGAAGTGCGTCATGGAGCAGCGACAGCTTTACGGGAACTTATAAGACTTCATGGAAAA
GGAGCGGGCAAATCCACTGATCAAACGCTGGAAGAAATGCAAGAGAGCCATTACGAATGGGTGATTGATGCCGCCTTACG
ATTATTGTGTGTATTAGGGCTTGATCGATTTGGAGATTTTGTATCTGACCAAGTTGTTGCACCAGTACGAGAAACATGTG
CTCAAGCATTGGGGTCGCTCTTTCTATTAGTGCCTGGTGGTCCAAATGCCAAAGATACAAATGGTGTTTTTCCTGGAATA
CTTTCTGTAGTCCTCAAACTGTTGGAATACAACGAATGGGAAGCGAGACACGGTGCATTTCTTGCTTTAAAATATTTACT
AGCCGTACGAGACGATCTTTTGGACGAGGTATTGCCGAAAGTATTTCCCTCTATTATGCAAGGATTATCCGATCCTGTCG
ATGACGTAGGCGCAGCTGCTGCGAGTGCGCTTATACCAGTAGCGCATGCTCTTCCGCGATTATTAAAACCAACAGAACTG
GAAGCTATCGTAATACGTCTTTGGCAATTGTTAAAAGAACAAGACGATCTGGCCGCAGCTTGTAACACCTTTATGGGTCT
TTTGGCTGCAATACTCTCGTTACCAGCAGCACGTGCTTGCATGACGCCCCAACCGTTATCGCAAGTATTACCACGTTTAT
GGCCATTTCTCAATCATTCAAGTTCAAGTGTACGTAAAGCCACACTGCAAACGCTACAAACTTTAACTGGAAATGACGGC
GATTTCAATGAAAACAAAAAGGAACGATGGGGCGAGGGTGGTGGATTAGTTTTGCAAGAAGCATTGAGGCATGTGTTTCA
GTGTGTGCTAATAGAACATATTAGCGCGATACAAGACGTGGCTGAACGTGTCTGGGAAAATCTAGTCGTGCAGAGTGATC
TCGAGTTATTGTTACACGCAGCGTGCCCTCACGTTAGTACATGGCTTTGTCTCGCCATGCAACCGGAACATGTGCCATTC
AATCCAAACTTATTAATGACAGTCGCTAGTACTAAGGGCACAAGAAACAATCAAACCTCGCCAAATGTCACTTTCTATGA
CGGGCAACCAGATACTAATGGTGGAAGCAGTAATATTAATGCAAGTACAAAATCATTATCCGAGCTGAAAATGTATATTG
GTGGGATTGAAACAGTGACACTGAACGTACGAAAAGCAAACGTAGTACAGGCTCGTTGTAGGGCGTCTCGTATGTTAGGA
TTGTTGTCGTACTACGTTGTACAACCCGCACCAGATGTCGTTTATCCACCAGACGTGCCTAGTCCTGCACTTTGTTATGC
TAAAGTGTTATTGGCACATCTCAATTCGCGATCGGCGTTGCAACGTACTGTTGTAGGACTTACGATGTCTCATTGGGCGA
GTGCGGATCCATCGAAGATACCTGTAATACCAGACATACTTCGTGACAGATTACTGGCTTGTTTAAACGAATGTATGTAC
TATGATGAGATTGCGACTTCCTTTACCCGTTTACTACATGAAAGTCGAGATTATATTGCAACTTTAAAACATTATAAATT
GATGGTACCAGTTGACGTAGATTCATCCGGCGTGATGACTCTTGATCAAATCGCTGCACTTGCTAGAAAAACAATTTCCA
CCCTTTGCACTGTGGGAGCAAATGCAGGTGGAGGTGGAAATATTAGCGGCAGTTCAATAGCTATTAAATTGAAACCTAAA
TTAATGGAGAGTTTAGAGGAGAGGAGGCGAGCTTTGGATGTCGGAGCGGCTACGACAGCAGCACAACAACAATTATTGCA
TGTTATGTCAATGGCCGCGCTCGCTGGTGCCGCTACGATGTTACACATTCTTCCACAATCTCCTCAGCCACTTAATCCGT
TAGTAAAACCACTAATGGAATCTGTAAAACGTGAAGAAAATGAGGAACTGCAAAAACTGGCTGCAAAACATTTGTCTCAT
TTGGTCGAACTTTGTGTTGATAGAAAACCATCTCCAAATGCAAAGATTTCTACCAATCTATGTACATTCCTATGTTCTGA
CGTTGAGTTTACACCACGAGTATGTAGCACCAGCAACAATGACGTTTTTGATGGAATACTCACTTTGAATAACAGACAAA
AACATGCTGAGAGAATAGCTTACAATCGTGGTGCAGGTAGCGGATTCGGCAGTGGTAGAGGTCCTGGTAGACCACCAACA
ACTGACATTCCCGTTGAGGAATTGCTTGCTTGTGAAGAACCAGAAGCCAAAGCTGCTAGAACGCGCCGTCGCGGAGCTAC
ATTGGCATTAACAGCTATAGCTACTCTCTTTGGTACTCAATTACCTGATCGCTTACCTGCACTATGGGATTTGATTTTAT
CGAATACATTGAAAGACACAATCAAACAAGACATTATAGAAGAAGATCACGGAAATCAATTAATTTTTGGTTTACAAGTA
TTAGAGATTATGGTGCCGAGTTTGGATAAGTCTTTGTTACCGCCTGCTCTAGAGTGTCTACCACGTTTATGCAATTTATT
AGCACATCCATATAAAGCCGTTAGGCATATGGCCTCACGATGTATAGCTACATTAGCTACTCTAAATACAGAGAAGACAA
TGGTATACATAATACACAGTGTTATACCACTCTTAGACACTACTGGTAGTGAGAAGAGATGTTCTTCAGGCTTAGTGGCA
CCTAACGAAGTTGATTCCGTACGCCAAGGAGCTGCGGAAGCTCTAAGTTGCATTGTCGAGAGCTTAGGTGTACGCGTGGT
GCCATATGCAGTACTTTTTATGGTACCTTTACTAGGGCGTATGAGTGATCAAAATCATTCTGTAAGACTAGTTTGTAGCG
CAACATTCGCTACGCTCGTGCAATTGTTACCGCTAGATCCTGGCGCAATTACAGATCCACCAGATTTAGTACAAGAAAAG
GCACAAGAGAGAAAATTTTTGGATCAACTGTTGAATCCTCGTAACATCCCTGATACTAAACTACCGATTCCCGTAGCCGC
AGAATTACGTTCTTATCAACGTCAAGGCTTAAATTGGCTCAATTTTTTGAATCGTTATCATCTCCACGGAGTTCTATGCG
ACGACATGGGTCTTGGAAAAACATTACAGACGCTCTGCATCTTGGCATTGGATCATCATCGCAATCCAGAAGCACCGGCC
AGCCTAGTAGTATGTCCACCAACACTCACTGGTCACTGGGTATACGAGGCCGAGAAATTCTTCAAAGCGAAGGATTTATC
AGTCATTCAGTATGCTGGTACACCTCAAGATCGCGAAAAATTACGTCCCCGAGTGCCACATCATAAGCTCGTAGTTGCAA
GTTATGATATTGTACGAAAAGACATCGAATTCTTCGAGGCCCATCAATGGAATTATTGCGTGCTTGATGAAGGTCATATA
ATAAAGAACGGAAAAACGAAAAGTGCTAAAGCCACGAAGCGTTTGCACGCAAATCACAGGCTCATATTATCCGGCACACC
TGTACAAAACGATGTGCTCGAGTTGTGGTCTCTGTTCGATTTTCTGATGCCAGGCTTTCTCGGCAGCGAAAAACAATTTG
CCGCTAAATATTCTCGTCCCATTTTGGCCTGCAGAGAGCCAAAAGCAGGACCGAAAGAACAGGAAGCTGGTGCTTTAGCT
ATGGAGGCTCTTCACAGACAGGTATTACCGTTCTTATTGAGACGAAATAAGGAAGATGTATTGCAAGATTTACCACCCAA
AATTACACAAGATTATTACTGCGATTTATCGCCTTTGCAACGTATACTTTACGAAGATTTCCGCACTCGTCATTCGGCCC
TTACTACCAGCTCCTCGTCTTCGAATGATTCTCAAAACCACGTGTTCGAAGCGTTACGGTATTTACGTAACGTGTGTAAT
CATCCTAAATTGGTGCTAAGTCAAGGGCATCCGCTATACCGAACAGTATGT
PEP:
>SINV20685-PA
LTFRLDRLFILLETGTNAVTKRAAAQQLGEAQRLHPHDLHHLLARVSTLLKSPQWDTRISAAHAVQAILAQVPSWDPQPI
KKENSTDESETIKRKASTTRLNLESFDMSRVLARSSHLTGSEGSEYDLTISEGEQLSLPSQQEKLAAKLGLHPRLMGVDD
LFTVDDLTPQTPCATQPATIPIDETLKQPGGLSRREMNRAKRKARQSVTKQRSREPDDHRTNDDHSNSMNVQSPVNNIGE
PPTKKVILEDMISDPGSKCGISNEQVIGVPDSTGCWPDSLVDWPLESFAESLCQDLFSQKWEVRHGAATALRELIRLHGK
GAGKSTDQTLEEMQESHYEWVIDAALRLLCVLGLDRFGDFVSDQVVAPVRETCAQALGSLFLLVPGGPNAKDTNGVFPGI
LSVVLKLLEYNEWEARHGAFLALKYLLAVRDDLLDEVLPKVFPSIMQGLSDPVDDVGAAAASALIPVAHALPRLLKPTEL
EAIVIRLWQLLKEQDDLAAACNTFMGLLAAILSLPAARACMTPQPLSQVLPRLWPFLNHSSSSVRKATLQTLQTLTGNDG
DFNENKKERWGEGGGLVLQEALRHVFQCVLIEHISAIQDVAERVWENLVVQSDLELLLHAACPHVSTWLCLAMQPEHVPF
NPNLLMTVASTKGTRNNQTSPNVTFYDGQPDTNGGSSNINASTKSLSELKMYIGGIETVTLNVRKANVVQARCRASRMLG
LLSYYVVQPAPDVVYPPDVPSPALCYAKVLLAHLNSRSALQRTVVGLTMSHWASADPSKIPVIPDILRDRLLACLNECMY
YDEIATSFTRLLHESRDYIATLKHYKLMVPVDVDSSGVMTLDQIAALARKTISTLCTVGANAGGGGNISGSSIAIKLKPK
LMESLEERRRALDVGAATTAAQQQLLHVMSMAALAGAATMLHILPQSPQPLNPLVKPLMESVKREENEELQKLAAKHLSH
LVELCVDRKPSPNAKISTNLCTFLCSDVEFTPRVCSTSNNDVFDGILTLNNRQKHAERIAYNRGAGSGFGSGRGPGRPPT
TDIPVEELLACEEPEAKAARTRRRGATLALTAIATLFGTQLPDRLPALWDLILSNTLKDTIKQDIIEEDHGNQLIFGLQV
LEIMVPSLDKSLLPPALECLPRLCNLLAHPYKAVRHMASRCIATLATLNTEKTMVYIIHSVIPLLDTTGSEKRCSSGLVA
PNEVDSVRQGAAEALSCIVESLGVRVVPYAVLFMVPLLGRMSDQNHSVRLVCSATFATLVQLLPLDPGAITDPPDLVQEK
AQERKFLDQLLNPRNIPDTKLPIPVAAELRSYQRQGLNWLNFLNRYHLHGVLCDDMGLGKTLQTLCILALDHHRNPEAPA
SLVVCPPTLTGHWVYEAEKFFKAKDLSVIQYAGTPQDREKLRPRVPHHKLVVASYDIVRKDIEFFEAHQWNYCVLDEGHI
IKNGKTKSAKATKRLHANHRLILSGTPVQNDVLELWSLFDFLMPGFLGSEKQFAAKYSRPILACREPKAGPKEQEAGALA
MEALHRQVLPFLLRRNKEDVLQDLPPKITQDYYCDLSPLQRILYEDFRTRHSALTTSSSSSNDSQNHVFEALRYLRNVCN
HPKLVLSQGHPLYRTVC
Swiss-ProtTATA-binding protein-associated factor 172
KEGG     K15192     
SUPERFAMILYSSF48371  ARM repeat superfamily     
Gene3DG3DSA:1.25.10.10     
PfamPF00176  SNF2_N; SNF2 family N-terminal domain     
SMARTSM00487     
ProSiteProfilesPS51192  HELICASE_ATP_BIND_1; Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile.     

You might be interested in these researchers

You might be interested in these references