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Gene detail [Fasta]

Species Solenopsis invicta
GeneSINV12985
PositionSi_gnF.scaffold05285:179192..190127[GBrowse]
Ant Genomes Portalhttp://hymenopteragenome.org/cgi-bin/gb2/gbrowse/sinv_10/?name=SINV12985
sequence mRNA: 
>SINV12985-RA
GTGTTTCTAGTCCCCATGCCGCGCAACCGCGCCGAAGACGACAACGACAACGACGACGACGACGACGACGACGACGACGA
CGACGACGACGACGACGATGACAACGATGACAACAACAACGTCGGCGAAGAACACTTTGATGATTTTTTGGATGCGCTTG
CATTTGAATACTCCGTACAATTAACATTTCGGGAACAATGGTTGGATGAGAGATTACGGTTTAATGACTTCGGAGGTCGA
CTTAAATATTTAACTCTGACGGAAGCTAATCGCGTCTGGATGCCGGATCTGTTCTTCTCGAACGAGAAGGAGGGTCACTT
TCACAACATCATTATGCCCAACGTATACATACGAATTTTCCCGAATGGCTCGGTTCTTTACAGCATACGGATATCCTTGA
CGCTCTCGTGTCCCATGAATTTGAAACTGTATCCCCTGGATCGACAAATTTGCTCACTTCGTATGGCCAGTTGTAATAAT
AATCATTGGTCTGTTCCGACAGACGGATGGACGACGGACGACTTGGTCTTTCTCTGGAAGGAAGGCGATCCCGTTCAAGT
GGTCAAGAATTTACATCTACCCAGATTCACCCTCGAGAAATTTCTCACGGACTACTGCAATAGCAAGACAAACACCGGAG
AGTACAGTTGCTTGAAAGTGGACCTGCTGTTCAAGAGGGAATTCAGTTACTATCTTATTCAAATCTACATCCCGTGCTGC
ATGCTCGTTATCGTGTCCTGGGTGTCTTTCTGGCTGGATCAGAGCGCCGTGCCTGCTCGGGTGTCACTAGGCGTTACGAC
ACTACTGACGATGGCCACGCAAACATCGGGGATAAACGCCTCACTGCCACCAGTCTCCTACACGAAGGCTATCGACGTCT
GGACGGGGGTGTGCTTGACTTTTGTGTTTGGCGCGCTACTCGAATTCGCACTGGTTAACTACGCGTCGCGAAGCGACATG
CACAGCGACAACATAAAGAAGCAGTTTCCGACGAGCGAGATGGAACATTCGTCGTCGATCGATCCATCCTCGGAACTGCT
CGAGCCGGATGGATCTGCCAATTTCGCCATGGTCAGCATACTAAGAAATGATGTTCCCCGAGCAGCACAGAAACCAAAAA
AAGTGTGCGAAAAACTAACGGATCAATGTCACACGAATTCTTTCAGAAGCCTCTGGTCCGACACCCGGAGGATTCCATGT
CGATGGATAAATTGCAGCAGTGCGAAATACATATGCAACCACGGAAAAAAAACTGCTGCAGGTCGTGGCTGTCCAAGTTC
CCGACGAGGTCCAAGCGCATCGACGTCATTTCACGGATCTTCTTCCCAATCGTATTCGCTTTCTTCAACCTCGCGTACTG
GTCCACGTACCTGTTTCGAGAGGAGGAGGGGGACGAATAAATCTCGAGGAGGAGGCGCTCGGATCAACAAGGGAAGTGGC
TCGCGGCCATCCTCAGCAACAACAGTTTCAACAGACACGACCGCCACAGCAACGTTCACGTCCTCGTCAACGACAATTGT
ACCATCATCCTCAGAATCGTCATCATCATCATTCTCAGAATCATCATCACAATTCCCATCA
PEP: 
>SINV12985-PA
VFLVPMPRNRAEDDNDNDDDDDDDDDDDDDDDDDNDDNNNVGEEHFDDFLDALAFEYSVQLTFREQWLDERLRFNDFGGR
LKYLTLTEANRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIRISLTLSCPMNLKLYPLDRQICSLRMASCNN
NHWSVPTDGWTTDDLVFLWKEGDPVQVVKNLHLPRFTLEKFLTDYCNSKTNTGEYSCLKVDLLFKREFSYYLIQIYIPCC
MLVIVSWVSFWLDQSAVPARVSLGVTTLLTMATQTSGINASLPPVSYTKAIDVWTGVCLTFVFGALLEFALVNYASRSDM
HSDNIKKQFPTSEMEHSSSIDPSSELLEPDGSANFAMVSILRNDVPRAAQKPKKVCEKLTDQCHTNSFRSLWSDTRRIPC
RWINCSSAKYICNHGKKTAAGRGCPSSRRGPSASTSFHGSSSQSYSLSSTSRTGPRTCFERRRGTNKSRGGGARINKGSG
SRPSSATTVSTDTTATATFTSSSTTIVPSSSESSSSSFSESSSQFPS
Swiss-ProtGlutamate-gated chloride channel
KEGG     K05273     
SUPERFAMILYSSF63712  Nicotinic receptor ligand binding domain-like superfamily     
Gene3DG3DSA:2.70.170.10     
PfamPF02931  Neur_chan_LBD; Neurotransmitter-gated ion-channel ligand binding domain     
PRINTSPR00253     
ProSitePatternsPS00236  NEUROTR_ION_CHANNEL; Neurotransmitter-gated ion-channels signature.     
TIGRFAMTIGR00860     

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