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Gene detail [Fasta]

Species Linepithema humile
GeneLH18306
Positionscf7180001004941:199775..202198[GBrowse]
Ant Genomes Portalhttp://hymenopteragenome.org/cgi-bin/gb2/gbrowse/lhum_10/?name=LH18306
sequence mRNA: 
>LH18306-RA
ATTGTGATGTCATTTTTCATAAGGAATGGTGGCCGAGGAAGTGGAACGAAAAAACGCAAATTTAATGGCCATCTTGGTAA
AACATTTACAACTCAATCTACATCAAAGCAATCAAAGAAAACAAAGAAATTTGTACCTGACGATGATGAAAGTATCGCTA
GTACAGATGAGGAACTCGCAGAAGAAAATTTAAGAGATGACACATATAAATATGAAGATGAAACTGACGAAGAAGAGGAA
ACTGCACAGGAAAAACATTTAAGGCTTGCAAAACAGCATCTGAAAGAAATTGAAGAAAAAGAAAAAAATAGGGTAGAATT
TGACGAGAGCACAGTTTCAAAAAGATTACGTGAAGAATATTTAGAAGAAAAGGGTCGATTAAGGAAAACTGTAGCAGTAT
GTTATGTTGGTCATAATGAGCTAGTTACATTGAAATGTAAAGAGCATAAAACATCTATTACTTGCATTTGTCTTTCCAAT
GATGGCCATATATTATATTCGGGATCCAAGGATGGCAGGTCAGTAAAAGATAAGGTTAAATTAAAAGCTATTAAAGGAAA
TAGAGGGAAAACAAAAGATGGAATGAAATCTATAAGATGTTTAGCCATTAGCACAGATAACAAATTTTTGCAAATTAAGA
TATCTATTCTCATTTTTGTTTCACTGCAGGTAGTAGGAGATGATGGGTGTAAAGATATAAAAATATTTTCTGGCGATAGC
CTCGATCATATAAAGAATTTACAAGGTCATAGAGATCTTGTGACCGGATTGGTATTCCGGAAAGGTACTCACACATTATA
TTCCGCGTCTGAAGATAGAAGTGTAAGAGTTTGGAATTTAGATGATATGGCTTATGTTGAATCTTTATTCGGGCATCAAA
ACAAAATCACATCTATTGATGCGCTTTCACGAGAGCGTGCTATCACGAGCGGTGGTTATGACGGGACTATTAGGATATGG
AAAATAGTTGAAGAATCGCAATTGATATTTAATGGACATAACAATGGTCATAGCATCGATGTTGTTAAACTTATAAATGA
AGAAAATTTCATCAGTGGTGGAGAGGATGGACAACTCTGCGTTTGGGGATGTCTGAAGAAGAAGCCATTGTGTTCAGTAG
TAGAGGCGCATGGAATAGACGAAACCAATGGTCAACCAATGTGGATTTCAAGTATCGCAACATTGTTGAATACAGATTTA
GTAGCATCAGGATCACGAAATGGCGTTGTTAAATTGTGGCAATGCGGCGAAGGCTTTAGATCTTTAAATCTCTTGTTTGA
AGTTAAATTAGCAGGTTTCATAAATTCGCTCGCTTTTACTCCCGACGGAAATCATCTCATTGCCGGTGTAGGTACTGAAC
ATAAAAACGGTAGATGGTGGCGAATACCAGAAGCAAAGAATGCTACTGTTATTATACCATTAATAGCTCCTTGCACACTG
TTGACTAGTCGCTGGCAACTTGCTCGTCGGCGACCACTGAGCATATTGGAATTT
PEP: 
>LH18306-PA
MSFFIRNGGRGSGTKKRKFNGHLGKTFTTQSTSKQSKKTKKFVPDDDESIASTDEELAEENLRDDTYKYEDETDEEEETA
QEKHLRLAKQHLKEIEEKEKNRVEFDESTVSKRLREEYLEEKGRLRKTVAVCYVGHNELVTLKCKEHKTSITCICLSNDG
HILYSGSKDGRSVKDKVKLKAIKGNRGKTKDGMKSIRCLAISTDNKFLQIKISILIFVSLQVVGDDGCKDIKIFSGDSLD
HIKNLQGHRDLVTGLVFRKGTHTLYSASEDRSVRVWNLDDMAYVESLFGHQNKITSIDALSRERAITSGGYDGTIRIWKI
VEESQLIFNGHNNGHSIDVVKLINEENFISGGEDGQLCVWGCLKKKPLCSVVEAHGIDETNGQPMWISSIATLLNTDLVA
SGSRNGVVKLWQCGEGFRSLNLLFEVKLAGFINSLAFTPDGNHLIAGVGTEHKNGRWWRIPEAKNATVIIPLIAPCTLLT
SRWQLARRRPLSILEF
Swiss-ProtU3 small nucleolar RNA-interacting protein 2
KEGG     K14793     
SUPERFAMILYSSF50978  WD40 repeat-like superfamily     
Gene3DG3DSA:2.130.10.10     
PfamPF00400  WD40; WD domain, G-beta repeat     
SMARTSM00320     
ProSiteProfilesPS50294  WD_REPEATS_REGION; Trp-Asp (WD) repeats circular profile.     
PRINTSPR00320     
CoilsCoil
ProSitePatternsPS00678  WD_REPEATS_1; Trp-Asp (WD) repeats signature.     

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