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Gene detail [Fasta]

Species Linepithema humile
GeneLH13643
Positionscf7180001004715:2279233..2291461[GBrowse]
Ant Genomes Portalhttp://hymenopteragenome.org/cgi-bin/gb2/gbrowse/lhum_10/?name=LH13643
sequence mRNA:
>LH13643-RA
ATGGTGGCCTCTCATGCCCACACTTGGGCCGCGAAAGCCAAGACGTGGCCGGTTGTTTACGAGACCACAAATTCCGGCGT
GAACTCACGAGAAGTTCTGGCAAGCCGCCAAAGCCTAATCATTATATACGACAAATCCACAAACCATGAGTTATGCGAGC
TAAACGACGAACGTATCGCTATTGTCCAAGCGGAGAGCCTCGACGAAAACTTCACTTTGGGTCTGGCCGTGCTACTGGCC
GGAGATTTCGCAATGTTACCACCGGACACGAAATTGAATAAGGTCGCACCACCAGGATGGTTAAGCAGCGGCAAGAGCAA
AGGTCTCCTAGGTTTACCGACCAGTTTCATGCTGTACCTGCGGCTTCGATTCTTCCTACCGTCTCTTCGTGGCATAAGGA
GCTGGATATCGAAGCATCTACTGTACCTACAAATAAGACGTTGTATACTGGAGCAGCAGCTGGTTTGCCCCTATCCCGAA
TTAATCAATCTGACGGGTCTCGCGCTTCAAGCTGAATTCGGAAACTACAACGTCAACGAACACGGTTGCGCGGATTACTT
CCTTCTCGAGCACTATGTGCCGGAATCCTTGATATTGAACGCGGACCGACATCAATCGCAGCCCTGCATCGACGCCGATA
CACTTCGGGCGCAGTTACACCGAGCTCACCGCGACCGCCGTGGCTTGGACTCGAACAAAGCCGAGGAGATGTTCATAACT
CACGCGCAGTCCTTGCCGGATTATGGCTCGCACTACTACATTGCCACGATAGACTCGAAGGAATTGGAGAAGCTGATGGA
GAAACAGAAAAAAGGAAAAAACGCTGTATCTAGCAATCGCAACGTCGTGTTATCACACAATAGTGCGACGGAAAGCGCTT
ATCGCCAGGAAAAATCTGCTAAGGAAACCGCCTACGATAGAATTCCGCCGCGATTAAAGTCTCGCGAAAACCCACCGATG
ACTCCCTATTCGGACGAGCACGCAAGAAGCGCAAAAATGTGCCGCGACGAAACGTGCAATAAGAACGTTAATAATAACAA
TAATAATAACAATAATAATAATAATAATAATAATAATAATAATATTAATAACGTTAACGGCAATAACAGCAAGAACAACA
AGACGCGCAAAAGGAAAACAGAGAGCAATGTATGGCTAGCTATACATGCTCAAGGTTTAAAGTTGTTAGAGCGAGGGGGC
GAACCGAGGGAGAGAACGGAACTGGCCCACTTTCAGTGGCGAGACGTACAGAAACTGAGTTACAGCAAAAGCTGCCTGGT
CGTGTATAGCAAGCTGAACGGGAGACGGTGTAAGCTTAAGCTGAGGATGGATCATCGAAAAAGTTACTACGTCTTCAAGC
TCACGTCCCTGCATCATCAGTTCTTCCTCAGACTTCGCTCGGAACTTACGTCGCTTCAGGGCCTCGCGAAAGATTTTGGA
GTACCCCTGACAACGGAAGTCAAAATTACACCACCAAAACCCACCAAGATTGGCGACGGTAAGACTAAGATACCGGTAGC
GAATGCAGTGAAAGTGCAACAGAGAATAAACTATCCGATGCAATTGGAAGAATATCAAAATAAAGAGAATGAAAATCCTC
AAAAAGATGCTAATATAGTTACGAAAGATATCGGTCGCGAACCAGGCTTTTATTCGTCGGAAGAGGACGCTCTTTATGCA
CAAGTAAACGTGCGATTGGAGCCGGAAGGTGAATCACGTGATACAGAAGAAGAATCTGAAAGAGGCATAATGACGTCGAA
CGAAATCTTGTTAGAACCCAAAGAAACCAAATCGGAGCATGACAAACTCTATCGGTGCCCCGGTTTAAATAGCGAGGCTG
AAACTGAATGCACATATTCCCTTCCAAAACTGACATCTAATAACATCAATCAAATAGATAAACCTAATAATCCTGAAGCA
CTTTACGCCGCTATTAACAAAGTTCGTCTATCGGGCAAAAACGAATTTCCTGTTTCGGACGTCTCGGAAGTTTGGAATTC
ATCAGAAGTGAAAAAAACGCTGCACAAGATGAAGACATCCAGTTTACCGAACTACGGCGTGTCAAAGCAGACGGGTGGTT
TTCGTACACCTAGTTTACCTCGACGGTTGGGCGTGAAAATGGGAACGCGAGCAATCTACAGCAGTTTGGCACAGAATACC
GCGCTTACCGACGATACGGAATCGCAATCTCTCAAGTCGGACACCGAATCATCTATCCAATCATTGTCGGCGCGGTCCAC
CGAATCGCCAATGCCGGAAGCATACGTGCTGAATGCCGATATACGCACCGACGACGAAACGTTCCGAGTTCCGGAGGATG
AGTCAATGTCTGTATCATTAATGGCTCGTTTAGAAGAGCTATCATTTGCCGAGGAACGAATTTTGCACACGATCAAATTG
GAACGTGGCCACGGCGGCAGCATAGGTTTGCAAGTGACAGAGGGTGACCGGATCGTAGCGATAAACGGGCAAAATCTGCT
GAATCTCCGCTATGAGGACGCTCTGAAGATGCTACAGAGCTCATCCGAAACGATAGAGTTGGTCCTCTCGCAACCCTCTA
CTCGGAAAAGCGTGGAATTGAGAAGTGACGAGGGCCAAGGCCCTGTAGACAACAATTACTTACATGATATCAAATTCGAC
GTGTCGTCAGAGGCGGAAACGTCCAGCATGATGAACAAGTGGATTATTCAGAAAACCACGGATGTAGCATCGGTGCAAAA
CACTTCGAGCGCTTACAGCAGTGCCGCGTCCAGCGCTATGGGCAATCATAACAATGCGAATAGCCTGTACTTGACTGATC
TCGTTGACAATAATGCGCTAAAGTCTGCTAGTATGCTGCTAAGTATAGAAGACTTCGACGTCAATAACGACAATTCGACT
GAGCCACCCGTGCCACCGCGGCGAACGAAGCGCAAGATCAAAACTACACCGATTGCGTTATCGGTGGCGAGCAGCGATGC
AATAGAAGCTACGAAACACGACGCGACACTTCAGCAAAAACATTCACCGCCGCCTCTGCCGCCCCCGCCAGAGATATGTC
GACGGAACAAATCTCGATCTGTCGTCGAAACCAGCCAGCCGCAATGCGACACCGCGACGAGCTGTCCGAGAGCCGAAAGT
GTCAGCGGACAACACCACGGCGAGAACCGCACCGTCGACACCGCGACAGACGTGATCGACGCGAAGTCCCCGGAATCGCG
CGACGATACGATATCCGCGAGCGAGAACTCGGCGATGAGCGACAACGTAAACGATGACCCAGTTTCGAAGTCGACCGCGC
CGAAACCACCATTCCTGCCTTCTCTCGACGTCACGTCGTCTAAGCGAAGAGCACTCAACAAATATCCACCGCTTTTTTTC
ACGCTGCGCGACTTCGAGGACGTAATGTCCTCTACATACAACAGAGACGATTTCGCGAACGGGTCTTCTGCGAATCTCGC
TGATTTACACGACAAAGAATCGTCGACAGTGTCTATGTTAAACGTGGGCGACGACGTTTGTTTTCGCGTGACGACAACGA
ACCGTCCGTTCGAAAAGTGTCTCGGCAAATGGAAAGACCCTTTCAATGATGATGACTTCGTTCAGAAACTCGACGATTAT
CGATTCGAAAATAGAACGGATAAGAGCGATCAGATAAACGTTAAAAAATCATCCGGTTATGATATTTTCGACAATAATAA
TCCGACGATAACAACCAATGAGAATCCGGATTATCGCGCAGGCATGAAAGTACGATTTGCGATTGAATCACCGAATCCTT
CCACGTCCGAATACGATTTGAATATAAAAATCGGTGTGCCGTGTGATAGTTCGCGCAGCTGCGAATCCATTCTCTACGAT
GAACAAGCCGGCGAACAAAGCACTACTTCTTCCGTGAAGTCGACTGAAATCCGAGAGAAATTCGCGGACATAAAAGATTG
CGGTGGCAATTCGGGAGATAAATCATACACTTCGAATAACGAGAAAGAAAATTCCGCAACAAGGGAAAACGATGCTTTTC
TGTTAACAGATACAAACAAAGTTGACACGATATTAAAGAGAATTCCACAAACGTGTTTTGATGATAGAAATAATGATATT
AATTGTGAGAAGATCCGTAAAAACGATTCTAATGTAATATCATGGGACGAGCACAATGAGAATCTCAAAATCGAAAAGAA
AAATATCCTAATGTCAGTCAAAACTATCACAAGCGAGGAATATGCTGCAAAACAAAAAGATGAAAATGAAATATTAAATG
TTTCATCCGAACTTACAGAAAACACTTGCCGCTTTATAGATAAAAGTTTAGAAACCGCATACAGAGATGAAAAGGTAAAT
GCGGCGGAAATAACACAAAAAATAACACAGCAGGAAAAAGAAATATTTTTGGAAAAAACTAGCGCTGACATCAAAGAGAA
ATGTGTTGCTGAGAATAAAAATATTTTCGTTAAAGATTCAATCCAAAGTTTTTCAAACGATCATGTGGACGATAACGTAA
ATCAGCATAATTCCGAGGATGAATCGAGGATGAAAAGAATTTCTATTGACAATCTCACAGACAAATCGCTCAGAATCAAA
GAAACTCGACAAATGTCGATTGAGGAAAACAAGGAAACAAGCGAGTTTCTAGAATCAAAGAATAATCGCGAGGAACTTTC
GCCATCAGAAGAGATTTTTGTGAAAAATGTTCCAGTAAAGGTTAGACGAAATTCTTTTCTAGAAACTATGCTGAGCGACG
ATTCAGCAGACATCTCAATAAATTGCGCGGTAATTTGTAAACAAACTCCATCAAACATAGACAAAGAATTAAGCACTCCG
AACGTACTGACAAATAAAGTTGGCGAATTTGATACAGATATCACAAAAGAAAGCGAGCACTTTTGCGACTTCAATAATGT
GATAAAAACAGCTACGGCGAACCAAGTTTTAAAGGACTCTAAGGGGACGAAAGAAAAAGTTACTAAAAACGCCGGTGATG
TGAAAAATGACGTACTGAACGAATTGCTCTGCAACTTTAGTAACATAAAGTTAAAAATAGTAAGTCCTGAAAATAAAAAA
CCAGCATTGAAGATAAGTGGTGATGAAAGTATTGCTTGCTCGGTCGCGATCGATAACGGACTTTCCAAGGGAAAGGAAAG
TGAGAGTCCTAACTTGCAAATGTTTAAAAAATCTCAAAGTGAAGTTTACAACGTTCCTATAAACGTCAAAACTGTAGACA
TAAGGAATGACGCAACAAGCGTTGAGAAAATTGTTAAGGAAAAAAAATTCATAAAAATAGAAGTCGAGGATAAACCTCAG
GATCTTAAAAATAATCATCATAATGCAGCAAACGATGAGAAAATCGCAAACAATAAAAATATTGAGAGAACAAAACGCGA
GGAATTGTCCTGCAGTATAAAAGATAAGATCACAAAGAATAGCTCTCTGAATATAAAAGTCGATGAGAAATCTTCTGATA
TTAAATCAGAAGAAACCTGTGTAAGGATAAAGACCGAGGAGACGTTCAAGAGCGCAAAAAATGCTGGCGATGCCAAACGA
GAGTCTAAAAAACCGCGAGATATTCGCGCTCCCAAGACTATACTTAAGAAAACAAGCGCTGAGCGCGAGCGGCAACGGAC
GAGCAAATTCCAGGAGAGAATTCCTATCGGAGCACCCGCAACTATGAACAAGATTTTCGACAGCAAAGAATTAGAGACGA
TAGCGGACGCGTCGCGCAGAAGCAGTCTGAGAGATGGGAGAATATACGAGACAACTTCCAGAGAGACTCACGATCGCGGC
GGAAAAAAGACTGACGAAGAAGTAAACGCGGACGACGGAGCCGACGTTGATCGGCAGAGGATCGCGAGTCGATCGGCATT
AGCGTTAGTAGAGAATACGACGGGTAGCAGCGATAAGTGTGCCATAGCTAGGAAGACTATTTCCGTAACCCCTTGTAATA
ATAATGACAATAACAGGGCCGTAACACCCGTAGCTAACGTAAGTAACGACCAATCACCCCGCGACGTTGTAACGATAACC
CCGGGTAAAGTTAGGAGCTTCGTCAAGTATTACGAGATTCGGGGCGACGTAACGACCGCCGAGAGACATTCTAAAATTAA
CAATAGAGAGAAAGTAGCTAGGTGTAAGTCTACTAAGAGCCAAGCGGCGCCCGTTGCCGCGAGGAACCCGCAACGGCCGG
AAGTAATAACGGTGAAAAAGGGAAAAGCAAACGGAGGCAGAAGTATTAAATCAAACGATGGTGACATTCTCAGAAAGACG
TTTAATAATGCTCAATCTTCAACGTTCGCCTCGATAGTCCCGGAACATCTTCCCGATATTTCAATCTGTAAAACAACGGA
AATGAAATCGAAGGTAATGAAAGAGTATGAAAAGACCGCCTCGTATGTATTTGACAAAGAAATGCATAAGCCACTCGCTA
AAGTAAGCGCGAAGAAGTCAGTGCAGTTTTTAGGCGATTTTACCATTATTCACTCGGAAACTTTCGACGGGAAAGAATCT
ACGGTCATCGCGGACCACGAGGCGAACGCATCAAGGAAGAGGAAAGCCCCTGGAATCCCACGATCGCGAGATTTCGATGG
TTGTCAGAAGCTTGTTCACGAAATCACGAAAATGGAGAAACTGCCAGACACCGAAAAGAGTTCCTTCCAGCAACGGGAGA
CCGTTGCTCAGATACATACAGTAGCCGGTCATGGTGAGAATTCAGGTATTAACCGCTTCGTTCCAAAACCAGAAATCCCA
CAGCTCCATCTTCTTATGTCGGATGACGTAAAACGGACTTTGTCTTCGATGAGCAATATGAACATAAAGTAA
PEP:
>LH13643-PA
MVASHAHTWAAKAKTWPVVYETTNSGVNSREVLASRQSLIIIYDKSTNHELCELNDERIAIVQAESLDENFTLGLAVLLA
GDFAMLPPDTKLNKVAPPGWLSSGKSKGLLGLPTSFMLYLRLRFFLPSLRGIRSWISKHLLYLQIRRCILEQQLVCPYPE
LINLTGLALQAEFGNYNVNEHGCADYFLLEHYVPESLILNADRHQSQPCIDADTLRAQLHRAHRDRRGLDSNKAEEMFIT
HAQSLPDYGSHYYIATIDSKELEKLMEKQKKGKNAVSSNRNVVLSHNSATESAYRQEKSAKETAYDRIPPRLKSRENPPM
TPYSDEHARSAKMCRDETCNKNVNNNNNNNNNNNNNNNNNNINNVNGNNSKNNKTRKRKTESNVWLAIHAQGLKLLERGG
EPRERTELAHFQWRDVQKLSYSKSCLVVYSKLNGRRCKLKLRMDHRKSYYVFKLTSLHHQFFLRLRSELTSLQGLAKDFG
VPLTTEVKITPPKPTKIGDGKTKIPVANAVKVQQRINYPMQLEEYQNKENENPQKDANIVTKDIGREPGFYSSEEDALYA
QVNVRLEPEGESRDTEEESERGIMTSNEILLEPKETKSEHDKLYRCPGLNSEAETECTYSLPKLTSNNINQIDKPNNPEA
LYAAINKVRLSGKNEFPVSDVSEVWNSSEVKKTLHKMKTSSLPNYGVSKQTGGFRTPSLPRRLGVKMGTRAIYSSLAQNT
ALTDDTESQSLKSDTESSIQSLSARSTESPMPEAYVLNADIRTDDETFRVPEDESMSVSLMARLEELSFAEERILHTIKL
ERGHGGSIGLQVTEGDRIVAINGQNLLNLRYEDALKMLQSSSETIELVLSQPSTRKSVELRSDEGQGPVDNNYLHDIKFD
VSSEAETSSMMNKWIIQKTTDVASVQNTSSAYSSAASSAMGNHNNANSLYLTDLVDNNALKSASMLLSIEDFDVNNDNST
EPPVPPRRTKRKIKTTPIALSVASSDAIEATKHDATLQQKHSPPPLPPPPEICRRNKSRSVVETSQPQCDTATSCPRAES
VSGQHHGENRTVDTATDVIDAKSPESRDDTISASENSAMSDNVNDDPVSKSTAPKPPFLPSLDVTSSKRRALNKYPPLFF
TLRDFEDVMSSTYNRDDFANGSSANLADLHDKESSTVSMLNVGDDVCFRVTTTNRPFEKCLGKWKDPFNDDDFVQKLDDY
RFENRTDKSDQINVKKSSGYDIFDNNNPTITTNENPDYRAGMKVRFAIESPNPSTSEYDLNIKIGVPCDSSRSCESILYD
EQAGEQSTTSSVKSTEIREKFADIKDCGGNSGDKSYTSNNEKENSATRENDAFLLTDTNKVDTILKRIPQTCFDDRNNDI
NCEKIRKNDSNVISWDEHNENLKIEKKNILMSVKTITSEEYAAKQKDENEILNVSSELTENTCRFIDKSLETAYRDEKVN
AAEITQKITQQEKEIFLEKTSADIKEKCVAENKNIFVKDSIQSFSNDHVDDNVNQHNSEDESRMKRISIDNLTDKSLRIK
ETRQMSIEENKETSEFLESKNNREELSPSEEIFVKNVPVKVRRNSFLETMLSDDSADISINCAVICKQTPSNIDKELSTP
NVLTNKVGEFDTDITKESEHFCDFNNVIKTATANQVLKDSKGTKEKVTKNAGDVKNDVLNELLCNFSNIKLKIVSPENKK
PALKISGDESIACSVAIDNGLSKGKESESPNLQMFKKSQSEVYNVPINVKTVDIRNDATSVEKIVKEKKFIKIEVEDKPQ
DLKNNHHNAANDEKIANNKNIERTKREELSCSIKDKITKNSSLNIKVDEKSSDIKSEETCVRIKTEETFKSAKNAGDAKR
ESKKPRDIRAPKTILKKTSAERERQRTSKFQERIPIGAPATMNKIFDSKELETIADASRRSSLRDGRIYETTSRETHDRG
GKKTDEEVNADDGADVDRQRIASRSALALVENTTGSSDKCAIARKTISVTPCNNNDNNRAVTPVANVSNDQSPRDVVTIT
PGKVRSFVKYYEIRGDVTTAERHSKINNREKVARCKSTKSQAAPVAARNPQRPEVITVKKGKANGGRSIKSNDGDILRKT
FNNAQSSTFASIVPEHLPDISICKTTEMKSKVMKEYEKTASYVFDKEMHKPLAKVSAKKSVQFLGDFTIIHSETFDGKES
TVIADHEANASRKRKAPGIPRSRDFDGCQKLVHEITKMEKLPDTEKSSFQQRETVAQIHTVAGHGENSGINRFVPKPEIP
QLHLLMSDDVKRTLSSMSNMNIK
Swiss-ProtFERM and PDZ domain-containing protein 2
SUPERFAMILYSSF47031  Second domain of FERM superfamily     
Gene3DG3DSA:2.30.29.30     
PfamPF00373  FERM_M; FERM central domain     
SMARTSM00295     
ProSiteProfilesPS50106  PDZ; PDZ domain profile.     
CoilsCoil

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