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Gene detail [Fasta]

Species Linepithema humile
GeneLH17614
Positionscf7180001004930:309017..314160[GBrowse]
Ant Genomes Portalhttp://hymenopteragenome.org/cgi-bin/gb2/gbrowse/lhum_10/?name=LH17614
sequence mRNA: 
>LH17614-RA
ATGTTGTCGACTCCAAAAGCAAAAGGCGGCCTATTTTTGGCTTCATCCCTCTGCGATGGGCTTGAAGACTATAATATAAG
GCAAGTTGCAACTCTTTTGTTAAATAAAGATGCGGATCCCAATTTCTTAATTCCAACACATGGAGTTACTCCATTTCATT
TGGTTATTGGAAATGATTCAGAAGAATTTGCGGAAGAAGTCACCAAGTTATTCTTACGTCATGGTGGTAATCCTAATGTG
AGATCAAATGATGGAATGACTCCAGTTCACGTGGCAGCAGCTTGGGGAAGAATAAATATATTACAGTTACTCTTAGCGAA
TGGTGGTGATCCTTTATGTACGGACAATGATGGACGTAGCCCATTTCATTATGCCTTTGAAGGAAAGTACTTCAAAGCTG
TGACAATGCTTTCAAATTACTGTGAAAACATTCAGGATGAGGATGACAAGCCAAAATATAACTTGGTGCTTGATAAAGTT
TTAATTACTAATGGAGACAAAGTTGCTGAATATGTTGCCTCAAAAGATATATTATCAGATTTAGATACAGATAAGACAAC
AAAGAAGAGTGCATTTACTGATTTTGAGCCAAACTCTTCATCAATGATTGTAGACTTGAGTCGTTTGCCAAATGTACGTA
ATGTTATTGAAACTAAGTCCAAATTAGCAACCAATTTAGATAAATGTCTTTCAAGATCCAACGATAAAATGATTGCCCAA
CAACAAAATGATCTATCACAGATTGATAAGAAAGAAATGACAAATTACTCATTTATAGATCTTGATTTTGACTTTGCAAA
TTTGCATCTTACTGATGTCATGCAAAAAGAGAAATGTCTTGTCAGTCGAATAATTAGTCATCTTTCGTCGTCACTAGCGA
GTGATTGTACTATTAATGACACTTTGCACAATTACAAAAGAAATAAGCAAGAAGAAAGCAGCATCGCAACAAGCAATTCC
GATGCATTTCAACTAAAAAAGAACACAGATACAGTTTATAAACACGAATATTACAGAAATCCAAAGAGTTCTTCATCTAG
ACTGAAGAATAATTTTAATAAAGATATCTTGAGACTTGGCACTTCTAAAGTGAAGAAACAATGCTCAAAGTACAACGCAC
AAAGCACTTCTAAGAAAAAATATAAGAAGATTGCTGAAAAAATTCCTTCACCATCAACTAATATCTTCAATAATAATTCT
ATTGTTAGTATGTCGCCAAATTTTAATACACCTAATCACAGAAAGAGAAGAAATATTGCTAAGACTCCGTTAACACTATT
GCATATCCACAATGATTCTATTGTCACAAGTAAGACAACTTACTATGATATTCTGGACATGAGTAGTGAATGTTCATCAT
TTTCTAAGAAATCCTCAAAAATAAGACGCCAAAATTATAGCAACCATTTGGCAATAAAGTTGGATGATGGAAGATACGAT
GAGGATGATATAACATGCGACAACAGTAACATGCCGAAAACAATGGACATTTCCATCGATAATGTAAAATCTGCATGTAC
AATTGAAACTGATTCATTGCATAAAAAATACTTTGTGGATTGCGTCGACTGTGATACTAAAAAGTTATTAAACGAAGATA
TAAATATGAATATAAAGGAATCATGTTCTTCAAAGATAAATAGGAACAATACTGATTCAAAAAAGGCAGAGGATATGTCG
AACGCAATAAATTTAGATGTGTGCAAAATGGAAAAGAACTCGTCTCTGCTTTCATACGTGAGTACTCTGGAGGAATACAA
ATATGAAGATCCAGAAGAAGGCACTTCGAGCACATTTGATTTTCAAACTTTGCCGATGGAGCTGTTATATATCGATGATG
CAGCTCTTCGAAGTAAGCTGAGACAACTTGGTGATGAGCCCGGTCCAATCACCAATACGACTAGGCAAGTTTACTTAAAA
CGTCTTATGCGTTTGACAAACATTAGAGATGTTACTGTTCCATCGATGCCGCAAAACATGCAAAGAAATCAGGTTCAAGT
AGGCCCAAGCAACGAAATCGAGACTCGTCTACAGTTTGGAAACTGGTTAAATGAACTGGATATCTACAAAAGTCTGGAGA
GAGACGTATTCCAAGAATTTTCATCGCCAGATCCATCTCGGCGATGGCGCGAGGGCATGGCAAAAGCTTCTTTCACTTAC
TTGCTGTTGGATCCGCGTATAACACAAAATTTACCAAATCGTTCTACTAATCTTACGGAATCTGAGATATGGTCGATCTT
TCTTAATGCTATATTTTACATTGGCAAGGGTAAACGTTCCAGACCTTTTAATCATCTCTATGACGCTTTTCATACATGGA
CAGGCACCAGACCTAACACAAGTAGAAAAGTTAGCCACATTCTCGATATATGGAACGACAATTGCGGTGTAATTTGTTTG
CACATTTTCCAAAATGTTATTCCGGTGGAAGCTTACACAAGAGAGGCTGCCATGATAGATGCAATAGGAAAAGAGCGATT
AGGAAACTGTGTAAGCGGCAAGTACTATGGTATTGCAGCAACATGGAGCATGCAACAAAAACAGAAATTTGGTAGATATT
TATTGTACAAAGCTTTGAAAATTTTTATGCAAGAAGGTGAAAGTCAACTTTTCCCTGAAAATCTAGGGATGAATATATGA

PEP: 
>LH17614-PA
MLSTPKAKGGLFLASSLCDGLEDYNIRQVATLLLNKDADPNFLIPTHGVTPFHLVIGNDSEEFAEEVTKLFLRHGGNPNV
RSNDGMTPVHVAAAWGRINILQLLLANGGDPLCTDNDGRSPFHYAFEGKYFKAVTMLSNYCENIQDEDDKPKYNLVLDKV
LITNGDKVAEYVASKDILSDLDTDKTTKKSAFTDFEPNSSSMIVDLSRLPNVRNVIETKSKLATNLDKCLSRSNDKMIAQ
QQNDLSQIDKKEMTNYSFIDLDFDFANLHLTDVMQKEKCLVSRIISHLSSSLASDCTINDTLHNYKRNKQEESSIATSNS
DAFQLKKNTDTVYKHEYYRNPKSSSSRLKNNFNKDILRLGTSKVKKQCSKYNAQSTSKKKYKKIAEKIPSPSTNIFNNNS
IVSMSPNFNTPNHRKRRNIAKTPLTLLHIHNDSIVTSKTTYYDILDMSSECSSFSKKSSKIRRQNYSNHLAIKLDDGRYD
EDDITCDNSNMPKTMDISIDNVKSACTIETDSLHKKYFVDCVDCDTKKLLNEDINMNIKESCSSKINRNNTDSKKAEDMS
NAINLDVCKMEKNSSLLSYVSTLEEYKYEDPEEGTSSTFDFQTLPMELLYIDDAALRSKLRQLGDEPGPITNTTRQVYLK
RLMRLTNIRDVTVPSMPQNMQRNQVQVGPSNEIETRLQFGNWLNELDIYKSLERDVFQEFSSPDPSRRWREGMAKASFTY
LLLDPRITQNLPNRSTNLTESEIWSIFLNAIFYIGKGKRSRPFNHLYDAFHTWTGTRPNTSRKVSHILDIWNDNCGVICL
HIFQNVIPVEAYTREAAMIDAIGKERLGNCVSGKYYGIAATWSMQQKQKFGRYLLYKALKIFMQEGESQLFPENLGMNI
Swiss-ProtAnkyrin repeat and LEM domain-containing protein 1
SUPERFAMILYSSF48403  Ankyrin repeat superfamily     
Gene3DG3DSA:1.25.40.20     
PfamPF12796  Ank_2; Ankyrin repeats (3 copies)     
SMARTSM00540     
ProSiteProfilesPS50088  ANK_REPEAT; Ankyrin repeat profile.     
OrthologiGroup-00766    Ankyrin repeat and LEM domain-containing protein     

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