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Gene detail [Fasta]

Species Linepithema humile
GeneLH10158
Positionscf7180001002562:95300..103122[GBrowse]
Ant Genomes Portalhttp://hymenopteragenome.org/cgi-bin/gb2/gbrowse/lhum_10/?name=LH10158
sequence mRNA: 
>LH10158-RA
ATGGAACTTCCAAATTTAGTTATGGAGGATAGCATGAGTGTAAAGTCCATGGAATCAGTGGCGACAAGTGATGAATATGA
ATTTGTAAATGAGAAAGGTACTAGCAAGCAACAACAAACTCTTTTGGAACCACCCATGTTAAAAATTGCTAATAACGGCA
ATCTGGAGGATTTGCAAAATAATCTTCGTGAGGTCTGTATAGCTATCAAGCTTATCATGGTGACGCTAACTTTAGTAGAG
GACTCAAAAATGGAAGCAGGTGAATTCAAAGTAACAGGCGCTGTCACTCAACAAAACCAAGAAAAGACGAAAAAAGTGGG
TCATAGTAAATTTTACGACGTTAGTTGTGTTGTTACATCAGAGAAGCAGGATATTATGAAACCTGAGGATTATCTTGAGG
ACGAATTGAATACACTGTCACACGTTCAACAAGAATGCACTATATTCAATGGTGTAACTTATCTGGGAGCAGCTGCGATA
AATGCACCAAAGTCAGAATGTGAAATACAACGTAATATGAATATATTAAATGCAGAGCAATCTTTAAATTTAGGAATAAA
AATTTCCGTCTCAGTACCCAGTAGTTCACAAGGTTTGTACGATGCCGGGACACAACAAGCTATTGCGCGTTATGAAGTGC
AGCGTATTCTGTTTTATGCACGTGGTGAAAGTACCGGTCCATGTGCAGCATGCTTTGCTTTTACGTGGTCACATGGTGAT
ACCTTAGAATCTGCCATTTATCAATGTCATGTTTTTCGCTGTGACATACCAGAAGCGGTCGGACAAGTGTCAGCCTGCTT
TTCAAAAGCGTTTCACAGAATACCACGTTCGATGACAAGTTCTTTGACGGGAAGTGACTTTAATGGTTTCAATGCTGGTA
TCACCATGGAAATAAAAGAGGAAGATGGAAAAGGTGGTTTCAGTACAGTACCTAAGGACAGAAATTGTTTCAAATTACGA
AGTAACGTAGCAAAGCAAGTTTGTTTGAGCATTCAGCAAGTGTCCAGTAAAGAAGGCGGCATTACACTTGAGGTTGAGAG
GTGTTTTGGAGTACTTGTTAGCCCCGGACGAAATGTTAAGCACAGCGATATGCGACTACTCGAGATGGTAAAGAGAGATT
CACACCAGCAAGTTAATTTTATGTCTATAATCAGCTCAGATGTTCGCAATATTACAACAATTTTGCAGCAAGTTAATACT
GGACCAATAATGCAAGATAAACAGTGTTATAATATTTGTGGACGCTGGGATCCTGCGGATCCCGCTTTGGAAACTCTTAA
TATAGAAACTCCTAGAGAAGGTAAAATTTTCATGACCGTCGCCGTTGATCTTGTTATCAGAGATATTCGTGAACCTGTAA
GATTTGTGATAGAAACGTCGGTTAAAGTGTTTCCACAAAACGAGAGATTTTGGTATTTTAATAAGAGAAATCTCGTGCAA
CAGTTTTATCTCAATTCGAAAGAGGTAATTTCTGGAGATGGTTCGGAAGTACATTATGAAGTACAAAGTATAGAAACATC
TGGCGAATTAGATAGAAACAGATTGAATCTTGCTCTGAATTTGGCATCTTTAATTAGATCACCATCTTTAACTAGTATCG
ACACACTTACGCCTAAAGAAGAAATAGATTCAGACGGAGACGAGCCCATGTTAAGTGGTACAGGTGAAGTTTCAAAGGAC
TGCTCGGCGGATGAATTGGCTAGTTGGGCTGAAGTTTTAGATAGTTGGCAAGTTAACGAGCAACGTCCAAAACTGCTTAT
AAAACTTACGAAACAAGGAATTCCCGAAGCTTTACGTGGCGAAGTTTGGCAACGTTTGAGTAACTGTGACAATTCACAGG
AGATGATGGACAAATACAGAATGTTGATTACAAAGGAAAGCAGCTGTGAGAGCGTGATTTTAAGGGATATTAACAGAACA
TTTCCAGCCCATGATTTTTTTAAAGAAACTGGTGGTTTAGGACAAGACTCTTTATACAGAATAAGTAAAGCATATGCTGT
CCATGATGAAGAAGTTGGATATTGTCAAGGCCTTAGTTTCTTAGTTGCTAGTCTGTTATTACACATGCCCGAAGAACAAG
CGTTCTGTGTTCTGGTCAAATTAATGTACGATTATGGTCTTCGACATTTATATAAGGACAGATTTGACAACCTTTACATG
CGATTTTACCAGTTGAATCGTTTGATAGAGGATCAATTACCAGAACTTTATAAGCATTTCTGTGATCGCGGCGTGGAAAC
GCACATGTTCGCCGCACAATGGTTTCTAACTCTATTTACTGCTAGATTTCCACTATATCTCGTCTTTCATATCTTGGACG
TATTTCTTTTGCAAGGTCTCGACACATTATTCCAAGTCGCTCTCGCTTTGTTAATGCTGTGTAAGAAGGAGTTATTACAA
TTAGATTTTGAAAGTATATTGAAATACTTTCGAGTGCATTTACCAAAACGCTGCCGAAATGAAGAAGTCGCACGCTACGT
CATGAAGTTAGCTTGTTCAGTGACATTGAAGAAGCTGAAGAAGTATGAAGCAGAATTTATGACGCTGAAAGAAGCGCAAG
AAAATGCCGACGAATACAGTAACGAGGTGGAGCAGTTACGCGGCACAGTCGCCAGAAACGAAGAAGAAAAGCAGAGACTA
GAAGCGGAGCTGTTGCAAATTAAAGAGATGTTACAACGTGAAGTAGCTCGGGCAGACGCCGAAAGCCGTAGAAGCAACGT
CATCATAGCCGAATATAAGCAGATCTGCCAGCGTTTGGAAGACGACTACAATGCTGCAAAGACGACGTTGGGCGAATTAC
GAGTGCGTGATCCGGCAAAGGTTTCAAAATGTGAGAAATGTCGGACATGTATAATGGATTCGTCGAATATATTGGCGGAC
ATTTCGCATCCTTTAGAAAACCGGATAGATCCTATGCTGCATAGAGTTCAAGAGAGAGTGCGCGAACTGGAGTTAGAATT
GGCGCAGACGAAATTGGCGCATGTCGAAGCCGAATGTCGGAATCAGGTGAACGCTCACAATGTGTCTCGCATAACTAAGC
TTTCAAGAAGAAATCAAAATACGCAATGTAATGTGAGTATCGTTCGGCAGGACCTGACGCATCGATTACACGCTACTGCC
TCCGAGCTGCAAGCCGCGCGAAACAGCTGGCCATGGCTCAGTAAAACCTTGTCCAGCATTAAAGAAGCGGCGAATAAGAG
GGAAGTTATGACATCAGCTGCACTGAGAGATCTGAGGCGCGATAGCGCACCCGGAAGCGATTTGCACCATTTAATACATT
CTCGAAGCCGCGAAGCACGCGACAGTCTCAAGGAAGTTGTGTGA
PEP: 
>LH10158-PA
MELPNLVMEDSMSVKSMESVATSDEYEFVNEKGTSKQQQTLLEPPMLKIANNGNLEDLQNNLREVCIAIKLIMVTLTLVE
DSKMEAGEFKVTGAVTQQNQEKTKKVGHSKFYDVSCVVTSEKQDIMKPEDYLEDELNTLSHVQQECTIFNGVTYLGAAAI
NAPKSECEIQRNMNILNAEQSLNLGIKISVSVPSSSQGLYDAGTQQAIARYEVQRILFYARGESTGPCAACFAFTWSHGD
TLESAIYQCHVFRCDIPEAVGQVSACFSKAFHRIPRSMTSSLTGSDFNGFNAGITMEIKEEDGKGGFSTVPKDRNCFKLR
SNVAKQVCLSIQQVSSKEGGITLEVERCFGVLVSPGRNVKHSDMRLLEMVKRDSHQQVNFMSIISSDVRNITTILQQVNT
GPIMQDKQCYNICGRWDPADPALETLNIETPREGKIFMTVAVDLVIRDIREPVRFVIETSVKVFPQNERFWYFNKRNLVQ
QFYLNSKEVISGDGSEVHYEVQSIETSGELDRNRLNLALNLASLIRSPSLTSIDTLTPKEEIDSDGDEPMLSGTGEVSKD
CSADELASWAEVLDSWQVNEQRPKLLIKLTKQGIPEALRGEVWQRLSNCDNSQEMMDKYRMLITKESSCESVILRDINRT
FPAHDFFKETGGLGQDSLYRISKAYAVHDEEVGYCQGLSFLVASLLLHMPEEQAFCVLVKLMYDYGLRHLYKDRFDNLYM
RFYQLNRLIEDQLPELYKHFCDRGVETHMFAAQWFLTLFTARFPLYLVFHILDVFLLQGLDTLFQVALALLMLCKKELLQ
LDFESILKYFRVHLPKRCRNEEVARYVMKLACSVTLKKLKKYEAEFMTLKEAQENADEYSNEVEQLRGTVARNEEEKQRL
EAELLQIKEMLQREVARADAESRRSNVIIAEYKQICQRLEDDYNAAKTTLGELRVRDPAKVSKCEKCRTCIMDSSNILAD
ISHPLENRIDPMLHRVQERVRELELELAQTKLAHVEAECRNQVNAHNVSRITKLSRRNQNTQCNVSIVRQDLTHRLHATA
SELQAARNSWPWLSKTLSSIKEAANKREVMTSAALRDLRRDSAPGSDLHHLIHSRSREARDSLKEVV
Swiss-ProtRab GTPase-activating protein 1
SUPERFAMILYSSF47923  Ypt/Rab-GAP domain of gyp1p superfamily     
Gene3DG3DSA:2.30.29.30     
PfamPF00566  RabGAP-TBC; Rab-GTPase-TBC domain     
SMARTSM00164     
ProSiteProfilesPS01179  PID; Phosphotyrosine interaction domain (PID) profile.     
CoilsCoil

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