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Gene detail [Fasta]

Species Linepithema humile
GeneLH19212
Positionscf7180001004964:658058..672931[GBrowse]
Ant Genomes Portalhttp://hymenopteragenome.org/cgi-bin/gb2/gbrowse/lhum_10/?name=LH19212
sequence mRNA: 
>LH19212-RA
ATGTGTCATGCATTACGTTGTTTTTGCCGAGGACTCTGCCAAAATGCCGAGGCACGCGGTGCGTTGTTCGATGGTGACAG
GAAGAGATCGGATTACTTCACCGACGAGTCGCGCACTCTGGACGCCCATCAGCAGTATAGCCGGGGCGCATCCTCTGAAG
GGATGGAGGTGCTCGAAGAAAACAGAAGGACGCTTTCGTCGCGAGGTGTTATCGAGGAGCTGGAGGGGACGGAAGCGGAA
GCGAAAGCGGGACCCCGCGGCGATGAACGCGGGGACAAACATCTTTTGTCGGAAAATGGTGTGAAAATTCCTCCTCGAAG
AAACGTAAATGTCACTGGCAATTTTTCACTGAAAATACATTCCCGTTATCTTTTCCCGGCAGCAAACTCGGGCAGACAAC
AAGGGGACAATTTCGGAAATCGAACGCGCAAGAAGCGTCGTAGGGGTAAAGAGCTGAGGAATTCCAGTATCAAGGATCGT
GCGCACGAGATCAGCATCGAGGACAGTCGTGAGAACGAGATAACGGATAAGGGAGGTGAATTATCGCAGAGAAGAAACAG
TCCCCTGTCAAAGTCAAGACCGAAGAATCGGGAGGCGCGCAAATCCCGCGCGGAACGACGGAGACGAAAGAAGAAGGAGA
GGAAGGAGCGCAACAGAGGCCGGAAGAGCGCGCGACAGGACGACAAGCGACAGGATGTCGCGCGTCGATCGAAGCACGAG
AAGAAAATGTACGACGGCCTGAGCGATTTTCTCCGTGAAAAAGTCGACCCCGCCAGGATTGACACGTCCGAGAAATCGTC
AAGCGTCACTTTCGACCGAGCCTCGTCGATAGCGGCCGTCAACACGACGTTGCCGTCGAGTGTCGAGCATCGGCCGACGC
TCGAGGCGACGAAGAGGCCAAGAATATGCCTGCGTTGCGGCATTTACACGGCCGACACGGTGGAAAGAGAATTCTCCAAG
CAGCTCGAGATGGAGATTTCCAAATCCGCTTCGAAGAATCCTTCGATTCTGGACGACGGTATTTTCGATACCTCTCCTAA
GAAATCGGTGGAACGCGAAACCGATGAAAACCGAGGTATGGAGTCGAGCGAGACCGACACTTTGTCGAATGCCGAAAGCA
AATTCGGGGGCTCGCGTTACGACGTCGAGAAGATGCTGGGCTACTCGAGAACCGAGGAGGATCTGCCGATCTTGGATCTG
GAGAACCAAGTGCTGGAGAGGACTCTGAAGGACTACAACGCGTACATGACGTCGAGGTTGAAGCCGGCGCCGTCATTACC
GCCGATTCGTCGCACCTCCGGCTCACATCCTCCGAGAAAACCGATAATTAATTCGGAGGAGAGCGACGAGGAACTCGACG
ACGGAAGCGCGGAAGTCACGAGCGTGACGAAAGCATCGCAGGACGACGGCACGAGCGGGGATTTATCCTGCATAAACGGG
ACGTTCCTGCCGGCGCCTCTATCTCGCCACGCGCTGATCAAATATGTAAAGTCCTCGACCCCGGGCCACGAGTATTTGGA
AGCCGATTACGAGTGCGTGCCAGGATTCCATATGGTATCCCCCACGAGCCGATTAGTCTGCCGGAATCGTCAGTGGGTCG
GACAGGTGCCAAAGTGCGAGATCAAGCAAAACCCGAACGCCGGTCTATGCGCTGAAGCATCCTGCGAGCATGTTTGCAAC
GAAATTAACGGACGTGCCGTCTGTTCCTGCTACGAAGGATTCAGATTGGATGGCCGCAAATGCGTTGACATCAACGAGTG
TTTGCTGAACAACGGCCACGGTCCGTGCCAGGACACCTGTCGAAATCTCGTAGGAGGATACGAGTGCTCCTGCGAAGGTT
TGCAAGACGCGTCGCTCTCGACCGACAATCACACGTGCGAGCACGACAAACACACGGGTCCGTGCAGCGTTAACAACGCC
GGATGCTCTCACACGTGTTTGTCGACGATGGGTCGGGTGTTTTGCCTGTGTCCGGACGGTTTTATGCTCGAGGACGACTG
GAAAACCTGCCAAGATGTGGATGAATGCTCGGTGCCGGATCTTCAGACGGACCTGTGTCGCTATGGATGCATTAACACCC
CGGGTTCCTACCGATGTGCGGAACCTATGGAGTTGAGGGATCAGCCAGTTCTGGACAGCCTGTCCATCACTTGCCTGCCG
GGCTACGAACAGACCGCCCATGGGACGTGCATCGATATCAACGAGTGCACGGTTGATAACGGCGGGTGTACGGAGGTGTG
CGAGAATACAGACGGAAGCTTCTTCTGTGCTTGCGACGGCGACGAGAAAGCCCTGTCATCCGACGGGAAGTCCTGCGTAG
ACATAAATAGCATCGCGTGTCTACCATTAAATCCGGTTAGTCGTGGTTATTTAACGTGCTCTCGATTAGCCACGTCTAAA
TTGTGGCGCGACAGGCGAAAAGTGCCCAATCGACCTGGTACAAGATGTTTCTTAAAGTGTCCTCGAGGATATCAGCTTCG
CGGTGAATACGAGTTAACTTGTCGATCCGATGGCACCTGGGATGGATCGCAGGACGGAAAATGCGTCAGATACAGCAAGC
CGCGATTGGAGTGTCCGAAGGATGTCGTAGCCGAGTTACCGCCAGGCAGGGATGAGGCGTTTGTGACCTTTGATCAACCG
GCGACGGATCTCGATTGGTTCCGATACGTGCGATCGAAACCGTCCTGGGGTACGCGACTCGAAGCCACTCTGCAGCCTGG
CGTGCACGAGATCACGTTTTTCGCACGACATCCGATATCGAAAAAGCAGGCCAGCTGTGTGTTACGCATTATCGTCAAAG
GTGGCGAAGCACCGAAAGTCAAAGACTGTCCGAGGGACATCCAAGTTATCGGAAAGAACGGAACGGCAATCACATGGACG
GAGCCGACTTTCACGGATAATGTGAAGGTGACGCGAATCAGTAATAATGAGAATCCGGGTCGTCGCTTCGACATCGGCGG
TCATCGGATTGAGTACGAAGCGAGCGATGAGGCCGGCTGGTCGAGCAAGTGCGTTTTCACCGTGGTCCTTCGTTGGGAAT
AG
PEP: 
>LH19212-PA
MCHALRCFCRGLCQNAEARGALFDGDRKRSDYFTDESRTLDAHQQYSRGASSEGMEVLEENRRTLSSRGVIEELEGTEAE
AKAGPRGDERGDKHLLSENGVKIPPRRNVNVTGNFSLKIHSRYLFPAANSGRQQGDNFGNRTRKKRRRGKELRNSSIKDR
AHEISIEDSRENEITDKGGELSQRRNSPLSKSRPKNREARKSRAERRRRKKKERKERNRGRKSARQDDKRQDVARRSKHE
KKMYDGLSDFLREKVDPARIDTSEKSSSVTFDRASSIAAVNTTLPSSVEHRPTLEATKRPRICLRCGIYTADTVEREFSK
QLEMEISKSASKNPSILDDGIFDTSPKKSVERETDENRGMESSETDTLSNAESKFGGSRYDVEKMLGYSRTEEDLPILDL
ENQVLERTLKDYNAYMTSRLKPAPSLPPIRRTSGSHPPRKPIINSEESDEELDDGSAEVTSVTKASQDDGTSGDLSCING
TFLPAPLSRHALIKYVKSSTPGHEYLEADYECVPGFHMVSPTSRLVCRNRQWVGQVPKCEIKQNPNAGLCAEASCEHVCN
EINGRAVCSCYEGFRLDGRKCVDINECLLNNGHGPCQDTCRNLVGGYECSCEGLQDASLSTDNHTCEHDKHTGPCSVNNA
GCSHTCLSTMGRVFCLCPDGFMLEDDWKTCQDVDECSVPDLQTDLCRYGCINTPGSYRCAEPMELRDQPVLDSLSITCLP
GYEQTAHGTCIDINECTVDNGGCTEVCENTDGSFFCACDGDEKALSSDGKSCVDINSIACLPLNPVSRGYLTCSRLATSK
LWRDRRKVPNRPGTRCFLKCPRGYQLRGEYELTCRSDGTWDGSQDGKCVRYSKPRLECPKDVVAELPPGRDEAFVTFDQP
ATDLDWFRYVRSKPSWGTRLEATLQPGVHEITFFARHPISKKQASCVLRIIVKGGEAPKVKDCPRDIQVIGKNGTAITWT
EPTFTDNVKVTRISNNENPGRRFDIGGHRIEYEASDEAGWSSKCVFTVVLRWE
Swiss-ProtSignal peptide, CUB and EGF-like domain-containing protein 2
SUPERFAMILYSSF57196  EGF/Laminin superfamily     
Gene3DG3DSA:2.10.70.10     
PfamPF12662  cEGF; Complement Clr-like EGF-like     
SMARTSM00181     
ProSiteProfilesPS50825  HYR; HYR domain profile.     
ProSitePatternsPS01187  EGF_CA; Calcium-binding EGF-like domain signature.     

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