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Gene detail [Fasta]

Species Linepithema humile
GeneLH22569
Positionscf7180001005026:463000..471500[GBrowse]
Ant Genomes Portalhttp://hymenopteragenome.org/cgi-bin/gb2/gbrowse/lhum_10/?name=LH22569
sequence mRNA:
>LH22569-RA
ATGGCGACGTCTTTAGCAGCGCAACTTAAAAAATTGAGAACCCCGCAGACGAGTTTACTGCTGCAGGACAAAAAGCGTGC
CAGTTTATTGTTTGATCCAAAAGAAGCTGCGAATTTGGACAGGGACACTGTACTGAGTATAGGTCAGAGCGGTCTGCAGG
AATTGGTAAAACTGTCCTTATTATTTGTTGACTTCAAAGGAACACTATTTGCACAGAGTTCTGTAAGCTTTGAGCGTGCT
GTTCAAGATGCTACACTAAATAAAAAACTAGATGCAGAAATCTCCAAGTTTTTGTTGCTACTGGCTCCCTACTTTTTACT
GAGTGCCACTCACAAAACTCTAGAGTGGCTGATACATAGATATCATATTCATCAATATAATCGTGATCAGTTTATACTTC
TGATTTTGCCATATCATGAAACTCGTATGTTTGTTAGAGCTTTACAGCTGATTGATTTGTCAGACGAGAATGACAAATGG
TTTTGGTTGGCACCTCTGCAGAAACGTGGTGTTCCATTGGCCTCAGAAACTTTCGTTAATCGCTTGAGCGTAGATAACGG
GCTTCTGAAAATGTTGTGCACCCATGTGAAATCCGCCACGGAGGTTTACTCGGAGCATGCCTCCTGCTTAACCACTTTGT
ACGCCTTTTACACTACCGCTGTATTGGGTTTGATAGAAAGAATGTCCACTGTCACTGAAATTCAAGTAAACTATCTGCTG
CCGACTCTTCTTTACAGTCTGAAAAGTTCCATTTCTGATCTCGTTACCAGCAGCTACATGATTATTGCTAAGCTGATGAC
AAAGGTGAAATTCAACGCCAGTACCATGGAGAAGCTGCTCCTGAAAACCTTCAAGAAAACGCACTTGAAGCAGGAGGCTA
CAATTTTACTGCTCCATCTTTATCAGGCTCCGATTAATCGACTGACCGTCGTGCCGCAAAGTCTTGTTCTCCAGCTGTCC
GATCTACCTTGGTTTGTCGAGGCAGTCGCCACGGTCCACTCGTCAAGTATCAACGCGTCGCGATTCGTCGTGTCGTTCCT
TCAAACGGCTTGCCAAATCGTTGCCGAAGAGTCTCATCATATCGCTAGTGTTCAGAATACGATCGGCGATCTACTAGTAC
GTGTCAAACTCGATGACAATGCAGTGGATGACATCTTGTCCAGTGTATTAACGTACGAGTTCTTCAAGAGTGATACTTCG
AAGGTTGCGAAGGAGTTTCTAGCGCGATTTTATCAGAATTTCGAACGCAGCTACCCGGAGAGGTTCGATCGATATCTGAA
GGAGTTGATGAAGCGGAGCGAAAACGATCGAGACGCCAAGCAGGCATTGCATTTCCTTACTTCTTGGCCGTTTGGCACCA
AAGACACGCAGGAATCCATCGAGATTCTGGACAAGTTGACGCATGTGAACTCCGCGCAGCGAACGGTCGCCCTCGAAATC
CTCGCTAAAGACAGCGTGAGCGTGCCCGAAAATTTCCGCGGCATGATGACAAGCACGCTTCAGGCCAGATTCTCCGACAG
CGACGTGAATGTTGTGAGGATTCTGCTGTCCTTCTCGACGCGGCGATTAACTAGTTTAATGCCTACTGATACCTTGGTGG
ACGAACTTCTCGTCCTGCTGTCGACGTGTCACACGACATCGCGGAAGACGCTAGCCAAGCCGGCGCTGAAGATTCTTCTA
GAGCTCTGCGAAGAGAGCGATGACACCAGCGTCTTCCTCACGGCCTTGCCATATCTATTTCCAAACACAGACGAGGATAC
GGCGATCGCACTGGAAGTGCTTCGCTCGAACTTTGCCAAGAACAACGTCTACATGCAACATGTGATGGTGGACGTCGAGA
AGTCCGGGCTGGTGAACGCTGAAACAATCACCTCCGCTGCATTCCACAACATACTGAATCACGAGCTGCTGCCGCCGACA
GAGAACATACTAAATTCTATGCGACAACAAATCTCGCATGGCGACGCGGCGTCGTTGTTCTTTAATATGATTCTGTTGGG
CTCGGTCTGCCGAGTGCCTGTAGGTTCGATGCCCGCGCAAACCGCGCGCGACGTCATCGAGATGGCTACGGACATGATCA
AACGGTACTCACACGTCAAGCTGCTGCCTGATTGCAACAACATCACCGGCGACAACGTGCAAATGGCGCTGAAGCTAACG
ACAAAGGGTGTGCTCCCGCTGCAAGCGGGCACCTATGTCCTGGAAATGGTGCATCGTCGACTCAACATCAAATCCGAGCC
GCGGCTCGACTTCGACGACAACGCCGAGCGTAGCAATTTGATTCTGCGACTGTTGGAAATGTTCATCGAAGGCATGGACA
ATCATCATTGGCGCCAGCATTACTCCAGATGCCTGCAAATCTTTTTCCAGTTGCACTTTCCTACTACGAAAGACCTTGTG
CGCTTCCTGGCGCAGCTTTATGTGAAATCAGTGAAGGTACAGACGTCCTATTACTGCTTGCAGATCTCGTTGCTGCTGCT
CGATCAGTGTAAGTCTTTCCAGTGGGCCGTTCAGGATCAGGACTTTGTGACAAACTTGCTACTCTCGTTGGCGAGACGCA
ACAATAATTGCAGAATGGTGGCGACAGAGATCCTGAAGAAACTGACGCAAACTTTCAATCTCACCGCGGAACCGTTCTTT
GTACTACTCCAAGAACTGGCGGTGAGGAGCGCCGAGATTGCCCAGGACCCAGACCAGCTCTCACTGATTCTCTACGTCCT
TCTTTCACCAGATCCGGACGTGTCGCATCAGGTTAAGCAACGCAAGAAACTGCAACAAGCACAGAAGTTGTTGTTCGACG
TAGTGACGCAGCAGAACGAGGCGTCGAAGGTACCGTTGAATCGACGTTCGCAGTTGCTCGATGTTTTAACGCACGTCAAC
AGCAGCGGGATTCTTCAACGGCTGGCACCGTTGGGGCTTCAGCTTCTGCAAAAACTGGCGGACGACTTTAGGAACCAATC
GGCCGGCAGCGCGCTGCGGAACATACTGCAGCGTTTCAACGGCAACACTGTCGACGCGTTGAACGACAAACAAGTATGGT
CGCTCTTCGAGACGAGTATCGTGGAATATGAGCCACGGGCGGTGACGGAGAGCGGCGAACAAATATCGCCCAGCGTCGTG
CTACTGCGACAGATCGACGAGATGTTCTTCGAAAAAGCGGGCCGAGTGTCGCGCGACCTCCAGGCACGGATTCTATCGAA
GCTGCTGGACGTAGTAACCGACTGCGAAATCAGCAGCGTGATCAGCGTCGCCGGTCGGGCGTTCCGACGCATTCGCATCG
ATGCGACGATCGTCGCGTCGGAACTGAAGACAATGATGATAAGCAGCGAAGCGCAGGAGAAGGAATCGGCGACGACGAAC
AGCGCGAAGAAGCGGAAGCGGCGACACAGCCAGACCCAGTCGACGGTGAACCCGGCGATGATGCACAGTCGCGCGTGGAA
GCGTGGCGTCGCGCTGCTGGAGTTCGCACAGCGCGCCGACAACATCGAGCACGAGGACGTGCTGTACAGCGTGCTGTTTG
ATCTGCTGAACGTGTGCCTTAGCTTAGAGGAGCAGAGCCCGATCGAGTACACGAATCAGCTGATTCTGTCGACGATCCAT
CGGTTGATGACGCGTGGTTTGCCGGTGCGCGACGCCAATCTACAAATCGCTCTTATCACCAAGTGCATCCGCACGTCACG
CAACCCGCAGACACACCATCATGCGCTGCTGGTTCTGGTCGAACTATTGCGCTGCTCGGACGTGCGTCAAGCTCTCTTCA
ACATCATGCCGATCTTCACGTTCATGGGCAGCACAGTGGTACGCCAGGACGACGCTTATTCCATCCAAATCATCACCAAG
ACTCTGGAAACAGTGGTGCCAATTGTAAACGCTGCTGATGACGAGACGCACGCCTGTGAATTGTTGAGGACCTTCGTCGT
TTCGTTGCCGCATATACCTGAGCACCGGCGGACGCCACTCTTTATCAAGCTACTTCAACTACTCGACAATCATCTGCATC
TTTACTACTTGCTGACCTTTGAGAGGTACGTGATGAAGATCACGAGCCAGAAAAGCGAGCAGCCTACGCAGCGCTTGGAT
TTCGCTCTTCAAGTGTCACAGGAGTTCACGCCGCAGCGGCTGCTTCAAATTTGCGTGAAAGTGATCGAGTTTATCAAGGC
ACTGCCGATCGACATCGAGGACGAGCTGGGCAGGAAAGTGGCGATGAAGTTCCCGTACAAGCATGTCTACGACGTGATGA
AATCCTCGCCTAAGAGTCTGCGGCTCTACAAGTTAACGGCAGTGCAATTCCTCAGCGGCCTTCTGTCATCCCAGGATTTC
ATTAATCGCGTGGCCGTGCTGAATCCGGACGAGGCGCGCGAGATGATCAAGTGTTGCGATCGCCTAGTCATCGAGCTGAT
CCTGCTGATTCAAACTACGTCAAAAACAGCCGATCGGCATCAAAGCAAGCCGGGCGGCNNNNNNNNNNNNNNNNNNNNGT
ATTGGAAGGTGCTGCTGCATCATCTGTACGATGTATTGGATCTGGTGAACAACTTGCTGCCGAACAATCTATTCCTGAAG
AGCGTTAAGAACTTGCTGCAGAACGAGTTTCTTTCCGTGAAGAAAAACGCGCTAGAGCTGCTGAATGCGAGATTAATGCA
AAGGAAATTCGGCGAGGAGAATTACGTCGATCTTCTGAATCTGATTGAGTCGTTGATGTACTTCCTCGATTCTAGGATGA
AGACCGAAACCCAGGAACAGGAGATTGTCCAACAGACGGTATTGATATCCTTGAAACTGTTGGCAAAATTGTTGGCTACT
GATCATCCCGCTGTTTTTAAACCGATCTTGGATTTGACGACAGAACTGTTACGATCAAAAGACGGTCCAGTGTTAGCCAG
TGCAGCCTTATGCGTTGCAGAATTATGCAGCTCTATGAAAACATACGCTCTACACTCGCTAAACAAATTTGTGCCGGCGA
TTTTGAAGTTATTGGAGACTCATTGTCATCAGAACGTGCCGGATGTGATAGTCATTAGTATTGTGAGCGCTTTGCAGAAA
ATAGTGGAATCTCTTGGAAATTTCCTATCGCTCTATCTAGATCAACTTCTATTGCAATTGACGAGGTTGAATTCTTTATA
TACCGACACCGAACATCCTAAGATTGGTATCGTAGTTTCACGATTGAAGACGACGACGCAGAAGCTCTCCAGCTGCGTAC
CGCTGCGAGTGTTGCTGCCGGCTGTTGACAGGACTTATAAGATCCTATTGAAAAAAAAGTCTTATCAATGCATACCGTCG
CTGATGAGCGTGCTGGCAGTATCCTTCGACAGTGTGCAACCGGTTGACTTGAAAGTCGAGATTAACAATCTCGCCAACTT
CTTCCTCCAGGTTCTGCAATTCCGCGAGGACATCGAGGACACGGAGGATGCGACAGCTATCTCGAAGGATATCATTGCTG
TTGAGGAGGGCGCTAGCAAAGCGCTGGTAGCATTGGTATTGAAGTTAAGCGAGGCCACTTTCAAACCGTTGTACAACAAA
CTCTACGGATGGGCAGCGAACGATACGCAGCACAAGCAGCGGAATATAACATTCTACACACTATCAGCAAATATTGCGGA
GTGCTTGAAGTCATTATTCGTCCTGTTCGCCGGACTCTTTTTGAGGCACGCAGCGTCGTTGCTGAGCAGCAACAACACAT
TCGTCACGGATGTTCCTCAGGAATTGACGCTTCCGGATGAATCGCGCCGAATCGAGCTGGTAGAGGCGATTCTGCTGACG
CTTCATCGAGTGTTTAGCTACGATGCGCATAACTTCGTCAGTCAGGAGCGATTTGAGATTCTCATGCAGCCGATAGTAGA
CCAGGTGGAGAACACGATGGGCACGCGAGAGGAATACGAAAGCCGGGCTAGTCGCTTGATCGTACCCTGCATTGCTTCCT
TTACCAGCGCTATTCCCGACGACTCGCTGCATAAACAGCTAGTCTATCAAACGTTGCTAAAGACCAGACATGCAAAGCCT
TATGTCAGGAGCACCGCTCTCATTGCACTGGTGGAAATTGCAAGAAAGCTCGGCGAAGATTTTATGCCATTATTACCGGA
AACCGTGCCATTCTTGGCGGAAATGCTAGAAGATGAAGACGAAGATACGGAGAAGTGTGCGCAAAATGCTGTTCGTACCT
TAGAGGATATTTTAGGAGAGCCTTTGCAGAAGTATTTTTAA
PEP:
>LH22569-PA
MATSLAAQLKKLRTPQTSLLLQDKKRASLLFDPKEAANLDRDTVLSIGQSGLQELVKLSLLFVDFKGTLFAQSSVSFERA
VQDATLNKKLDAEISKFLLLLAPYFLLSATHKTLEWLIHRYHIHQYNRDQFILLILPYHETRMFVRALQLIDLSDENDKW
FWLAPLQKRGVPLASETFVNRLSVDNGLLKMLCTHVKSATEVYSEHASCLTTLYAFYTTAVLGLIERMSTVTEIQVNYLL
PTLLYSLKSSISDLVTSSYMIIAKLMTKVKFNASTMEKLLLKTFKKTHLKQEATILLLHLYQAPINRLTVVPQSLVLQLS
DLPWFVEAVATVHSSSINASRFVVSFLQTACQIVAEESHHIASVQNTIGDLLVRVKLDDNAVDDILSSVLTYEFFKSDTS
KVAKEFLARFYQNFERSYPERFDRYLKELMKRSENDRDAKQALHFLTSWPFGTKDTQESIEILDKLTHVNSAQRTVALEI
LAKDSVSVPENFRGMMTSTLQARFSDSDVNVVRILLSFSTRRLTSLMPTDTLVDELLVLLSTCHTTSRKTLAKPALKILL
ELCEESDDTSVFLTALPYLFPNTDEDTAIALEVLRSNFAKNNVYMQHVMVDVEKSGLVNAETITSAAFHNILNHELLPPT
ENILNSMRQQISHGDAASLFFNMILLGSVCRVPVGSMPAQTARDVIEMATDMIKRYSHVKLLPDCNNITGDNVQMALKLT
TKGVLPLQAGTYVLEMVHRRLNIKSEPRLDFDDNAERSNLILRLLEMFIEGMDNHHWRQHYSRCLQIFFQLHFPTTKDLV
RFLAQLYVKSVKVQTSYYCLQISLLLLDQCKSFQWAVQDQDFVTNLLLSLARRNNNCRMVATEILKKLTQTFNLTAEPFF
VLLQELAVRSAEIAQDPDQLSLILYVLLSPDPDVSHQVKQRKKLQQAQKLLFDVVTQQNEASKVPLNRRSQLLDVLTHVN
SSGILQRLAPLGLQLLQKLADDFRNQSAGSALRNILQRFNGNTVDALNDKQVWSLFETSIVEYEPRAVTESGEQISPSVV
LLRQIDEMFFEKAGRVSRDLQARILSKLLDVVTDCEISSVISVAGRAFRRIRIDATIVASELKTMMISSEAQEKESATTN
SAKKRKRRHSQTQSTVNPAMMHSRAWKRGVALLEFAQRADNIEHEDVLYSVLFDLLNVCLSLEEQSPIEYTNQLILSTIH
RLMTRGLPVRDANLQIALITKCIRTSRNPQTHHHALLVLVELLRCSDVRQALFNIMPIFTFMGSTVVRQDDAYSIQIITK
TLETVVPIVNAADDETHACELLRTFVVSLPHIPEHRRTPLFIKLLQLLDNHLHLYYLLTFERYVMKITSQKSEQPTQRLD
FALQVSQEFTPQRLLQICVKVIEFIKALPIDIEDELGRKVAMKFPYKHVYDVMKSSPKSLRLYKLTAVQFLSGLLSSQDF
INRVAVLNPDEAREMIKCCDRLVIELILLIQTTSKTADRHQSKPGGXXXXXXXYWKVLLHHLYDVLDLVNNLLPNNLFLK
SVKNLLQNEFLSVKKNALELLNARLMQRKFGEENYVDLLNLIESLMYFLDSRMKTETQEQEIVQQTVLISLKLLAKLLAT
DHPAVFKPILDLTTELLRSKDGPVLASAALCVAELCSSMKTYALHSLNKFVPAILKLLETHCHQNVPDVIVISIVSALQK
IVESLGNFLSLYLDQLLLQLTRLNSLYTDTEHPKIGIVVSRLKTTTQKLSSCVPLRVLLPAVDRTYKILLKKKSYQCIPS
LMSVLAVSFDSVQPVDLKVEINNLANFFLQVLQFREDIEDTEDATAISKDIIAVEEGASKALVALVLKLSEATFKPLYNK
LYGWAANDTQHKQRNITFYTLSANIAECLKSLFVLFAGLFLRHAASLLSSNNTFVTDVPQELTLPDESRRIELVEAILLT
LHRVFSYDAHNFVSQERFEILMQPIVDQVENTMGTREEYESRASRLIVPCIASFTSAIPDDSLHKQLVYQTLLKTRHAKP
YVRSTALIALVEIARKLGEDFMPLLPETVPFLAEMLEDEDEDTEKCAQNAVRTLEDILGEPLQKYF
Swiss-ProtHEAT repeat-containing protein 1
KEGG     K14550  UTP10, HEATR1; U3 small nucleolar RNA-associated protein 10     
SUPERFAMILYSSF48371  ARM repeat superfamily     
Gene3DG3DSA:1.25.10.10     
PfamPF12397  U3snoRNP10; U3 small nucleolar RNA-associated protein 10      
SMARTSM01036     

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