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Gene detail [Fasta]

Species Linepithema humile
GeneLH11416
Positionscf7180001004463:132783..147667[GBrowse]
Ant Genomes Portalhttp://hymenopteragenome.org/cgi-bin/gb2/gbrowse/lhum_10/?name=LH11416
sequence mRNA:
>LH11416-RA
ATGGATTATCCGAAGAAAGAAACTGGATCCGAGAACGGACCTGATCAAGAACAGGAAAACGAAACACAAGTTGATGCAGC
TTCACCGTTGTCAAGCGTCGAGCTGTCAGAGAACGGCGCGCATCCATGCCCGACGTGTCCATCGGTGCTTTCCAGTTCCC
ACGAACTAACAAATCATCTGCGCGGCCACAACTCACCTCGCAGCACAGACTGCAGCGGCGAGGAAGATTACAGCTGCGGC
GTTTGCAACAAGGTGCTCAGCTCGGCGAGCTCGCTGGATCGACACGTGCTGGTGCACTCGGGCGAGCGACCGTTCAAGTG
CAAATATTGCGACATGTCGTTCACGACGAACGGCAACATGAACCGACATGTGCGCTGCACTCATCGGGTCGTGTCGCCGA
ACAGTTGCACAGACTCCGAGGGCAGCAGCGGCTCGGACAGGCCGGCGACGACGAATCAAGATGAATACAACAACAACGAC
ATAGCCAGGCGCAATTCGCCAGATCTGATGGACGAGCGGCAGCAACCGTCGCCGAGCAATAAGCGAAAGTGCCCGGACGA
AGATGCTAGCGACACGGAAGATCAAAGGCGGCACAAGATCCTTATGAATGACTCCAGAATGATGATCAAGTGCCGGCCGG
AGGAGGAGCAGAAGGCTTTTGGCTGTCCAATTTGCGGTCAGGACTTCGTGACCAGCGCGATCCTGGAGTCTCATATGGAG
CGCGTGCACCCGGAATCCCCGGCTAGATGCGATATCTGTAACGAATCTTTCAAGAACCACCGCGTGTTGAATCTCCATCG
TTCGATGACGCATTACAAGAAGAACTGCGACGGTGGCAACAGCCGGAACCCGCGTAACACCGTCGACGGCTTCCGAGATC
TGACGTTCATCGATTTCTCGTCAACCAAGTTCGCGGCGATCGCCCGGGCGATGTGCGAGCGGGAGCTGCACCGGCCAGCC
TCCGGCGAGGCTAACACGTTCCAGTGCATGAAGTGTCTGCACGCGTTTCCCTGCCGGCAGGCGCAGATGGCTCACGAGAA
GGAGTGCAGGGGACCGTACAAGAACAAGAGAAACAACAACGACAACAACAATAACAACGAGTACAATCGAACCAACAATA
ATCTCGAAACGGAACTGGACGTGCCATCGCCGCAACTTGACGACCCGAAGACGAGGCGCGAGGCGTTTTTCGCTGTGCTG
GATTTGAAGAATAAGTACAATTCGACGCACGAGCCGAGGGAACCGAGAGAACCGAAGGAAACCAAAGAACCGAAGGAAAC
GAAGGATCTAGCGGACATTCCGAGCATCTTGTCCGTGAGTCTGAACGGGCTGCAGACGTTCCCTCGCTCGGACGCCAGCA
CACCCGAGAGCAACATCAAATTCAATCCGAGCGTCGGGTCGTCGGGCTCCTCGGGCGCTTGCTCCTCCGAGTACAACGAG
GAAGAGGCGCAGGACGCCTTCACCGCGGAGTTCCGCAAGATGAAGCTGAAGGGCGAATTTCCTTGCAGGCTGTGCAAGTC
CGTGTTTCCGAATCTACGAGCGCTCAAGGGACACAATCGCGCGCACATGAACGTGGAGCAGGGGATGCCGTATCCGTGCA
ACATGTGTCCGTTCACGAGCACCGACAAGCAGGCGCTGCTGAAGCATCTGAGATCGCACAACGGCGACCGGCCGTTCGAG
TGCTCCCTCTGCAACTACGCGTTCACCACCAAAGCGAATTGCGAGAGGCACGTGAAGAATCGTCACGGCAAGATCAGCAA
GGAGGAGACTCTCGTTTATCCGAACGAGCGCGAAGAGGGCGCTCAACAGCAGCAAATGCATTATCCGCCCGTGCCGATCG
ACTGTAATCCCGGACCGTCGAACGTCCGCGCCGAGATACTGATAAATCGCTACGAGAAGCCCGACATATTTCCCATGCCG
GCGAAAATACAGGCTCTCAATCTCGTGAAGAGAACCGCCGATGAGATGAGCATGCCGCACGATCTGATCGTGAAGGCCAA
TTATTCGAAGCTCGACGAAGACGTTGAGTCGAGATCGTCGGACGGCAGCGTGTCTCTAGTCAGTGATGCCAAAACAGATA
CACACCAAAGAATTCAAGCCACTCCGATTAACTTGACGAAATCGTCGGCGAGCTCGGCGATGAATTCGGGCGAGGACAGT
CCGTTGGATCTGTCGATGGACGTTCTGGATCTGAGCAGAAAGCGGAAGAGGGACATCGAGGACACCGGCTCCCAGGAGGA
GAAGCGGTTCAAGAGCAACCAGTCGGAATTGTATGCGAATCCAGCGCTGCTGTTGACGCAAGCGCTGCTGAACAGAGCTT
GCGAGAGCTCGCCGACGACGTCGCTCGAAAACTTCTACGCGAATACTCTCTATCGTAATCTCGGCACGTTGACCGGCGCG
GGCATGATACCGGCGACGTACTTCCTGCCGCACATGTTCGGCCAAGCTGAATTGGCCGCGAAAGGCAGGCTGCAGAAGGA
GCTGGTCAGGGGCTTGCAGTTGACCGGCGGCGGCACTCTGCCGATGGATCCATCGTTGCCGAGCACGAGTTACGCGGCGT
ATTCGCAGGCGAGGGATGTCGTCCCGCAGACCTCGAGCGAGCAGACCGCCTATGCGAGCTTGATGAACGCGCAAACAGCG
GCGAGCCGCGACAAAGCGGACAGCATTCCGTCGAACGATCCTGTGAAGATGGTGCTCAAGAACGGCGTGCTGATTCCCAA
GCAAAAGCAGCGGAGATACCGAACCGAGAGACCGTTCCACTGCGAGCACTGCACGGCGAGATTCACGCTGAGGAGCAACA
TGGAGCGACACATCAAGCAGCAACATCCTCAGTATTGGAGCCAGAGACCGCGCGGCGGGCATTCGACCAGAGGCAGACCA
CCCGCGAGCCATCCGACTATGGTGCAAACTCCTGGCCCGTCCACCTCGCAAGTGGCGCAATCGTATCCGAATATTCTGCC
GAGCGTCGAGTCGCCGAGTATGGTCCCTCCGGCGGAGTACAGCACGCATCCCATCTCAGATCAAGTGAAGTATGCGATTT
TGGCGCAACAGTTGAAAGCTAATAAAATAGAGGACAACGATACGGATGACGAGATGGTGATAGACGAAGAGTCAGGCGAT
AACAGAGACGCTCAGGAGTCGCAAGTTCAACGCGAATCTGGCACGAGCTTGCTGAGAGATCAACTTGAAAGCAACGAAGG
CGTCAAAGACGTTGTCGTGAAGACGGAAATGGCCGAACCGGCGGAAGAAACGTCGGAAGAGTCTCCTAACGAAGAGGAGG
CGCACAATAGCGAGATCAAGTCGGAAGAATCCGCGGCCGCTGAGAGTAAGCCAATACGCACTGAAGAAACGACTGCGGCG
GAATCCGCTGGAAGGCAGCAAACCAAGCTCGAGGACGGAACACCCGATCTCGCCAGCGTCTCAAAGCTCTTGGACAACGC
GTCTCAGCAGTATCAACAATTTCAGCCGCAGTACTTGACTGACGAGGACGAGGGTCCCGTGGCGTCGACCAGCGGCAACA
ATTCCGGCAGCGAGAAATCCGACTCTGTGAATTCGAACTCCGGGAGCACGTGTTCGTCGAACAAGAAGAGGAAGAAGAAG
AAGAAGTCCGCGTATTCGATGGCGCCGAATCGAGTTGTGTGCCCTTACTGTCAGCGTCAGTTCCCTTGGACTTCGTCGTT
GCGACGACACATTCTCACTCACACCGGTCAGAAGCCGTACCAATGTATGCACTGCTCACATCACTTCACCACCAAGTCTA
ATTGCGACCGACACTTGCTGAGGAAGCACAAGGCGAAGGCGAATAAAATGCGCCGCGCTAGGAACTCCTCCTCGCCGGAC
GTGCAAGTGGCCACCGGCAACAGCAGCGCGAGCAGCAACACGTTCTCCATGAGAAACGTGCCCGAGAGACCGTACAAGTG
TAATCAATGCCCGAGCTCGACATTCTCCACGTTAGGCAATCTGAAGAAGCACCGGTCGACGAAACATCGCAAGGCCGCGT
CTCGATCGGAATCCAGCGATCAGCAGAACAGCCCGCCGCAGTGCGCCGCGCAGAACGACCAGAGCGATTACGAAAGCCGT
TCGTCAAGCGCGTCCGAGAACATGGAGAACTCGTCCGCGACCGCCGCCACCGCCAAATCGAATTCCAACACGTCGCCTAC
GATAAATAACGAGGGCACCAAGTCGCGCAAATCGCCTAGATCGTCACCGGGTCCTGGTGACGTTCCCTTTAAATGCTACC
TGTGCGACAGCGGCTTCTCCGAACGCCAAGACTGCTTGGACCATATCAAGGTACATCACAAACGCTCATACGAGATGCTG
AAGGCCAAAGGCGCTCTCGAAATGAATATAGATGCGGCCGAAGATCAGATATCCGCAGCGCAGCAACATCTCAGCGACGG
CGAGGAAAAGAAAGGCCGTTTTCCCGACTATAGCAATAGAAAGGTCGTGTGCGCTTTCTGCATGAGACGATTTTGGTCCG
CGGAAGATCTTCGGCGTCACATGAGAACCCACACGGGCGAGAGGCCCTTCGCATGCGATATCTGCACTAGGAAATTCACG
CTGAAGCATAGCATGCTGCGTCATCGCAAGAAGCACGAATCGGTGGATTCCTCCATGTACATAGGCAACAGCGGTGACGA
GGAGATCTCGCCTGCGCAGCCACCGACGATAACCCCCAGGAGTCAGCAGCATTCGCCGATCTCCACGAACACCAGCAGAC
CCCGCACTCAGGACAGAATATCCCTGCCGACCGTCGCGGCGGTCGCAACGGCGGATGCGGCACCCTGCGCATTGATGCGA
TATAATCACTACGATAACATGGCCACTCTCTCCGGCAGAATGGCAAACGACGGTACGCAGAGCACCGCTCCTGCCTCTCT
GCCGTCCCCGCCACCACCTACGGAAGCACCCGGCGAGAGCGGAGACAACGATCTGATTTCGAACTTGTTGGGAATACGCG
AGAAAGGTTTGCTCGACAAAGTTCTTCTAAGTTCGGCGGACGACGCGGCGAAGCTGCTGGGTGTTAATCACAGCGAGTGA

PEP:
>LH11416-PA
MDYPKKETGSENGPDQEQENETQVDAASPLSSVELSENGAHPCPTCPSVLSSSHELTNHLRGHNSPRSTDCSGEEDYSCG
VCNKVLSSASSLDRHVLVHSGERPFKCKYCDMSFTTNGNMNRHVRCTHRVVSPNSCTDSEGSSGSDRPATTNQDEYNNND
IARRNSPDLMDERQQPSPSNKRKCPDEDASDTEDQRRHKILMNDSRMMIKCRPEEEQKAFGCPICGQDFVTSAILESHME
RVHPESPARCDICNESFKNHRVLNLHRSMTHYKKNCDGGNSRNPRNTVDGFRDLTFIDFSSTKFAAIARAMCERELHRPA
SGEANTFQCMKCLHAFPCRQAQMAHEKECRGPYKNKRNNNDNNNNNEYNRTNNNLETELDVPSPQLDDPKTRREAFFAVL
DLKNKYNSTHEPREPREPKETKEPKETKDLADIPSILSVSLNGLQTFPRSDASTPESNIKFNPSVGSSGSSGACSSEYNE
EEAQDAFTAEFRKMKLKGEFPCRLCKSVFPNLRALKGHNRAHMNVEQGMPYPCNMCPFTSTDKQALLKHLRSHNGDRPFE
CSLCNYAFTTKANCERHVKNRHGKISKEETLVYPNEREEGAQQQQMHYPPVPIDCNPGPSNVRAEILINRYEKPDIFPMP
AKIQALNLVKRTADEMSMPHDLIVKANYSKLDEDVESRSSDGSVSLVSDAKTDTHQRIQATPINLTKSSASSAMNSGEDS
PLDLSMDVLDLSRKRKRDIEDTGSQEEKRFKSNQSELYANPALLLTQALLNRACESSPTTSLENFYANTLYRNLGTLTGA
GMIPATYFLPHMFGQAELAAKGRLQKELVRGLQLTGGGTLPMDPSLPSTSYAAYSQARDVVPQTSSEQTAYASLMNAQTA
ASRDKADSIPSNDPVKMVLKNGVLIPKQKQRRYRTERPFHCEHCTARFTLRSNMERHIKQQHPQYWSQRPRGGHSTRGRP
PASHPTMVQTPGPSTSQVAQSYPNILPSVESPSMVPPAEYSTHPISDQVKYAILAQQLKANKIEDNDTDDEMVIDEESGD
NRDAQESQVQRESGTSLLRDQLESNEGVKDVVVKTEMAEPAEETSEESPNEEEAHNSEIKSEESAAAESKPIRTEETTAA
ESAGRQQTKLEDGTPDLASVSKLLDNASQQYQQFQPQYLTDEDEGPVASTSGNNSGSEKSDSVNSNSGSTCSSNKKRKKK
KKSAYSMAPNRVVCPYCQRQFPWTSSLRRHILTHTGQKPYQCMHCSHHFTTKSNCDRHLLRKHKAKANKMRRARNSSSPD
VQVATGNSSASSNTFSMRNVPERPYKCNQCPSSTFSTLGNLKKHRSTKHRKAASRSESSDQQNSPPQCAAQNDQSDYESR
SSSASENMENSSATAATAKSNSNTSPTINNEGTKSRKSPRSSPGPGDVPFKCYLCDSGFSERQDCLDHIKVHHKRSYEML
KAKGALEMNIDAAEDQISAAQQHLSDGEEKKGRFPDYSNRKVVCAFCMRRFWSAEDLRRHMRTHTGERPFACDICTRKFT
LKHSMLRHRKKHESVDSSMYIGNSGDEEISPAQPPTITPRSQQHSPISTNTSRPRTQDRISLPTVAAVATADAAPCALMR
YNHYDNMATLSGRMANDGTQSTAPASLPSPPPPTEAPGESGDNDLISNLLGIREKGLLDKVLLSSADDAAKLLGVNHSE
Swiss-ProtRas-responsive element-binding protein 1
SUPERFAMILYSSF57667  beta-beta-alpha zinc fingers superfamily     
Gene3DG3DSA:3.30.160.60     
PfamPF13465  zf-H2C2_2; Zinc-finger double domain     
SMARTSM00355     
ProSiteProfilesPS50157  ZINC_FINGER_C2H2_2; Zinc finger C2H2 type domain profile.     
CoilsCoil
ProSitePatternsPS00028  ZINC_FINGER_C2H2_1; Zinc finger C2H2 type domain signature.     

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