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Gene detail [Fasta]

Species Linepithema humile
GeneLH23281
Positionscf7180001005056:301101..307625[GBrowse]
Ant Genomes Portalhttp://hymenopteragenome.org/cgi-bin/gb2/gbrowse/lhum_10/?name=LH23281
sequence mRNA:
>LH23281-RA
ATGTCATCCATAAACAGTATTGATTCCCACGGGACGCTACAGTGGGACATGATGGAATTAGCCCGTCATTTGCGGCAAGA
GAGACTGTTTGTTAATTCAGAACAGCAGAATTTACAAACACTTAACAAGCGAGTCTTGCATATATCGTCGGAATTAGCGC
AGCAAGCATGGGTAACTGCTCAACAGAGAGTGAATCTGAATCGTTTGATAGTAGCAAGGCCAGATTGCACTCCAGCCTCG
TGTTGCCTAAAAGCGAACGCGTTGGAAAATTCGCATTTCATCGATGCACATAAGTACCTGCGGTATCAAGCATGCTTGTC
TTATGGAGAATTTTTGGGCGCATTGCGAAAATCACCCAAGCTGCTCGCTTCGTGTCTGGTCGAAGGAGACAAAGTCATTC
CGGACTCAATGCAGATGATTGTACAGTGCTTAGCTGCTGGCTTATACGGCAGCTGTATATTACCGGAAGATAAAAGCTTG
GTGCTCCAATTGCTTAGGCATCTTATGCTGCTGCAGATAATTCCGTCTGACAACCCACGAAGATTGCTCAGCCATGGCAC
GTTCTCCAGATTCTACTCGATCTTTCACGAGAGTCTGTTTTCCGCAAAGCTCTTCCTGACTGCGGCTCTGCATAACCCTA
TCGTGCAATTGCTCATGGAGGATGAAATGTACCTGGACATCGATCCGGACAAAATGCCTATCAGATATCCAGCTGCGGAA
AGATTGAAGAAATTCGGGAAAGAAGGCACGCCTGAGTATCAAGCGAAGTTACAGCGTTACAGATTATGGACGATCAATTC
TCTGCATCGCATCACGCAGAGATTCATCGTCAACATTCGCGAAACGATGCACTGCTTTCCCACGAGCGTTTCCTGGCTAG
TAAGACAAATCGCAGGACTTTTCACCAAGAACGGCAATGTCGATCCGAAAGAAGTGCACGCCATGTGCACCGATCTTGTA
TTCACATACTTCATCTGTCCTGCTATAGTCAATCCGGAGCCGTACGGTATCACCGACGCGCCGATAGGCCAGGTCGCGCG
ATTTAATCTCATGCAGGTCGGACAAATTTTGCAGATGCTCTCGCTGCAGAAGTATCAAAGTGTTGATAATAAAGTTATCG
ATCTGTACAAGAAATTCGAGAAGGATTCGGTGTCTTCCATAATAGATTCGATGTTGGACGGCGCAACGGAGGAATTGGAA
GAGGAGCCAACAATCATTGACAATAATAAACTTCAAGGCCTGTCACGATCCGCAGCACTCTTTACAGAAGGTGAACTGGA
TACCTTAATTATGTTTTTGAATACTGTCATCGGTGACAGCAACGGAGAAGCAATATCGCATAATACATTCGATAGGAAGC
AATTAGCGGAGATGCTGTCGCAATTGCCCTCAGGTTCACTGCATAATAATAAGTCGAACAACGAGTATTTGGAAACACCT
ACTAAACGAGGTGTTGTTGGGAAAGGGAAAGGACGTATAAGGATGACCGCATCATTCTCACCAAACGCGACAAATGAAGG
TGGAGAGGAAATTAACAGCACTGCTGCTCCTGAAGAGGAAACTTTGGATAAGAATTCTCAAGATGTGTTAGTGATACCTT
TCGGCCCAACAATCGGAGAGTCTGTAGGACTGTTGAGTGAACAGAAAGTTTTATGCATGGAGCTCCAGAGTCGCATGGAA
AATGGACCAGTTACTTTGAATCTCCCGGACGATGCGTCTGTCGAACACACTAGACAGGAGAATGGCAACGTTGAACGCAT
CGAAACGCAAGAAAAACGAACGCGTTTCTCATTGTCACATGATGAAGGGTCAATTGGCAATACGTCCGATAATTTGGAAG
CTGTGTCAGAAGCTGCTTCCAATCACAGCGTCGCTTCGTCCCTGGAATTAGAGACAGAAGATCAAAATGATAATCTGTCA
GACATGGTGTCTGCTAATGTGTCGGGACGAGGAACTCCTAATATATCAGGACGAGATACACCGTCGTCCCAAATCACTGA
AGGAGACGATGGACGCGTTGCGGGTGAAGTAAGGCAGTTGGACTTGCCGCCGCCTAATATTCCGACTAAGCAGAGTAGGT
CTGAAATTGACGACAAGTTTTGTAAATTTGAGATCAAAAAGCTCATTGAAGGGGACGAGACTGTTTCTATGGTATCCGAT
ACTTGGTCTACAGATGTACTGGCCTCAGATAGCGAAATAGTTGAACAACAAGATCGAATACTGCTCCCTGTTCCGCCCGA
GCAAGTCGCGCCTGTTCTGCCGGTCGAGCCTACGCCGAATATGTTAGACATTAGTGAAACCGCCTCTGAAGCCTGGAGCA
CGGATGTGCTGGCTAGTGATTCGGAAAGATTGACCGAAGTCGATACGGATGACACTGCTAGTGTTGCTAGATCTGACGAT
ACTGCTAGGTCCGAGATTGAGATAGAGAGTCGCGCTGATTCCGAGGGTAACGAGGAAACGCTTCAGTCCGCCACTCCATG
TAAGTGCAGCAATTGCGTTACCGAGCGACGCTTAATCGTGACGTTTAATCGTACAGACGGCTCGGGCATCAATTTTTCGT
CCGTTTCTGGGATTCGAGATGATGCTGGAAGCGGAGGGGGAAGCGTGGGATCGTCGGTAGCGGTTCATTTATCACCGACT
ACGTCACCGTTACCGTCGTCATCCAACGTAACGGGTCGCGGGGGAACCAAGTCCGATTACCGACGCAGCACAATGGAATA
CGTAGATAAAAATGCGAACAATATAAACAATACAGATTACAGCAAGCCGTTACGCGAGGACAGACTGGTCCACTTGATAG
ATAAGCTTCAAATTGACAACGATAAGCAAGCCGAGCGTCAGGCAACTGCGCACAATCACATCGCTGCGGCTGCGGTCGCA
CCGGCGTTGCTGCTGGCTAATCATATTTCCGCGCCTGTTCTGCCGGAGAAGTCGCAAAACGGTAACGTGAAGGCAGAGGT
TTGTATTTTTCTCTTAATTCATTCGTTCAACGACTTTTTGCCGTACAAAGTGTCTTACGAATCGGACGCGAATGCCGTGA
TTCAGGAATTGGACGGCTGCATGGCGTCGGTTGGGGATACTGTTGGCCGACTCAGCACGGCTAGCTTAACATCCAGCAGC
AGTTCCGGATCGGAGCCGCGAATGAAGGGCAACAATTCGACGTCGGATTTGCCATTGCCAACGCCGACGGTTAACGGCAA
CTGCGATACAACAGATGGATCGACCACCAACTTTTCCAAGCCGAACGCATCCACGGGTGCCATTCCAAAAAGCATAAGTT
TCGACATGACGGCCGAGCGCGGCGATAAGGAATTGTTGGACGACGATCAGAAGAACAAACGCAGTTTCTTTGGCAAGCTG
AAGCTGTCGCTGAGAAATCGCAGAGGCAAAACGTTTCGTGGAACGGACGAGAGATGCTACGATCGAGAAGCCGGTGGCGA
CGGCGTCGATATATGCAGCAGGCACAGATTGCGCAGGATCATGTCGGAAGATGTAACAGCATCTAGTAACATTGCAGGCG
ACACCACCGATGACATATTAGCAAAGTACAGGAGGAAACCAAGTGCGGCCAGTGATACAGCCTCGGTCGAAAGCAACCAG
TCTCGCACAAAAGAGGTGGAAGACGAAAGGCTGTCGATCGATCCGAATAATGTAGAGCTGTCCTACGCTTTCGCGGACGC
TAAGAGAAAATTACGTATGGTACTTAGCACTGCTGACCTCCAACACATTCCATGGAATACTTCTGAGAGACACTGTTGGT
CGCAGAAGGAGAACGAACTGGTCGCGTTTTTGCAGCTGCAGTTGGCGGAGGCTATAAACTTGCAGGATAGATCGTTAATA
GCTCATCTTCATGAAACTTTACGTTGCGTGCGCCTATTTAATGACGACGGCTGTAGAAAGCTCTTCAAGTCTCTGCGGGA
AGATTATCAAAAGCGATCACCTTATATCGCGTATTTAATCAGATGTCGCCAAGGATTGCTGTCAACATTGGCTCACTTAG
ATAGGTTGTGCGAGCGAGTCAAGTGCGACCGGGATGCCATCAATAACCATCTCGTGTCCGTTTGCGTGCGAGTATTCTTG
GAAAAGAGGGAGGCTTTTCTCTTGCGCTTCTGCGACGAATTTAAGAAACTCACGCTGACCGACGAGAAGCAAGATCTTGT
CGATAATTTTCTGGGAAAAATCCACGCCGAGATGGACAACGATCCAATCTGGCAATCGGCGAGCGCTAATCAGTTGGACC
TGGCGAGAGTCGTGGTGGAAAGGACCGTGATGGCACGGGTGTACCATAATGCGCTCTACCCGAACGGAGATGGGGATGTG
TACAGGGACCAGCTTCTTCACGATCACATCAAAAAGTTGGCGAAGGTCATAACTCCGAATCACAAGGACCTACGCATTCC
GAAGGTTTATCATTACGAATGCCCCTGGCCATGGGCGCAGGCTGAATTGGCTGTGATATCGGCGTATAAAACTCCTAGGG
ACAAACTGCAGTGTGTGTTTCGTTGCGCGACCACCATCATGAATCTCCTCTCCATGGCGTCGGAAAGGGGAATCCCCGCC
GCCGACGACCTGATTCCTGTGCTAGTCTACGTCATAATCAAGACCAATCCGCCGTCATTGCTATCGACTGTCCAATACGT
AGACAGCTTCTATGGGAATCGACTGGAGGGCGAGGAACAGTACTGGTGGACGCAGTTCTGCTCTGCGATCGAGTTCATCA
AAACAATGGATTAA
PEP:
>LH23281-PA
MSSINSIDSHGTLQWDMMELARHLRQERLFVNSEQQNLQTLNKRVLHISSELAQQAWVTAQQRVNLNRLIVARPDCTPAS
CCLKANALENSHFIDAHKYLRYQACLSYGEFLGALRKSPKLLASCLVEGDKVIPDSMQMIVQCLAAGLYGSCILPEDKSL
VLQLLRHLMLLQIIPSDNPRRLLSHGTFSRFYSIFHESLFSAKLFLTAALHNPIVQLLMEDEMYLDIDPDKMPIRYPAAE
RLKKFGKEGTPEYQAKLQRYRLWTINSLHRITQRFIVNIRETMHCFPTSVSWLVRQIAGLFTKNGNVDPKEVHAMCTDLV
FTYFICPAIVNPEPYGITDAPIGQVARFNLMQVGQILQMLSLQKYQSVDNKVIDLYKKFEKDSVSSIIDSMLDGATEELE
EEPTIIDNNKLQGLSRSAALFTEGELDTLIMFLNTVIGDSNGEAISHNTFDRKQLAEMLSQLPSGSLHNNKSNNEYLETP
TKRGVVGKGKGRIRMTASFSPNATNEGGEEINSTAAPEEETLDKNSQDVLVIPFGPTIGESVGLLSEQKVLCMELQSRME
NGPVTLNLPDDASVEHTRQENGNVERIETQEKRTRFSLSHDEGSIGNTSDNLEAVSEAASNHSVASSLELETEDQNDNLS
DMVSANVSGRGTPNISGRDTPSSQITEGDDGRVAGEVRQLDLPPPNIPTKQSRSEIDDKFCKFEIKKLIEGDETVSMVSD
TWSTDVLASDSEIVEQQDRILLPVPPEQVAPVLPVEPTPNMLDISETASEAWSTDVLASDSERLTEVDTDDTASVARSDD
TARSEIEIESRADSEGNEETLQSATPCKCSNCVTERRLIVTFNRTDGSGINFSSVSGIRDDAGSGGGSVGSSVAVHLSPT
TSPLPSSSNVTGRGGTKSDYRRSTMEYVDKNANNINNTDYSKPLREDRLVHLIDKLQIDNDKQAERQATAHNHIAAAAVA
PALLLANHISAPVLPEKSQNGNVKAEVCIFLLIHSFNDFLPYKVSYESDANAVIQELDGCMASVGDTVGRLSTASLTSSS
SSGSEPRMKGNNSTSDLPLPTPTVNGNCDTTDGSTTNFSKPNASTGAIPKSISFDMTAERGDKELLDDDQKNKRSFFGKL
KLSLRNRRGKTFRGTDERCYDREAGGDGVDICSRHRLRRIMSEDVTASSNIAGDTTDDILAKYRRKPSAASDTASVESNQ
SRTKEVEDERLSIDPNNVELSYAFADAKRKLRMVLSTADLQHIPWNTSERHCWSQKENELVAFLQLQLAEAINLQDRSLI
AHLHETLRCVRLFNDDGCRKLFKSLREDYQKRSPYIAYLIRCRQGLLSTLAHLDRLCERVKCDRDAINNHLVSVCVRVFL
EKREAFLLRFCDEFKKLTLTDEKQDLVDNFLGKIHAEMDNDPIWQSASANQLDLARVVVERTVMARVYHNALYPNGDGDV
YRDQLLHDHIKKLAKVITPNHKDLRIPKVYHYECPWPWAQAELAVISAYKTPRDKLQCVFRCATTIMNLLSMASERGIPA
ADDLIPVLVYVIIKTNPPSLLSTVQYVDSFYGNRLEGEEQYWWTQFCSAIEFIKTMD
Swiss-ProtGTPase-activating protein and VPS9 domain-containing protein 1
SUPERFAMILYSSF48350  GTPase activation domain, GAP superfamily     
Gene3DG3DSA:1.10.506.10     
PfamPF00616  RasGAP; GTPase-activator protein for Ras-like GTPase     
SMARTSM00167     
ProSiteProfilesPS50018  RAS_GTPASE_ACTIV_2; Ras GTPase-activating proteins profile.     

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