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Gene detail [Fasta]

Species Linepithema humile
GeneLH23430
Positionscf7180001005056:2194831..2200416[GBrowse]
Ant Genomes Portalhttp://hymenopteragenome.org/cgi-bin/gb2/gbrowse/lhum_10/?name=LH23430
sequence mRNA:
>LH23430-RA
ATGACGGATCAAGAAGAAGTTGTGAAGAATTTGCGATCATGCTTGATATCGTGCAAAGGCGGTATCAAATTGGACAATTT
ATGGGCGGATTACCGTATGATCGCGGGAGAACCATTACCGTACAGACAATTTGGATACCCCACGGTGGACGCTTTCGTAC
GTACTATACCGGATATTACCGTGACCAAAAGAAATGGCGAGCTGTACGTGGAAGCTGTGCCCTCCAAGAACACGGCACAT
CTCACGAAATTAATTTCACGGCAGAAGAGCACACGACGAAAAGTATCCAAAAAAAAATGGAGTCCACCTCGTTATGCCGC
CAGAAGTTTCTCACCTGGTTTTAGAACCAATAATTCTAGCAACTTTCAATCTGTTAAAAGCAGCTACGTTGATTCTCCTG
GTTCCTTTACTAAATCAACGCCTGGAAAGAGTAGCTTATATACAGATTTTAGCAGACCTATAATGCCTCTCATGGGAACT
AGAGTGCAGTGTCCGTTCCCGCATAATAGCGAGAACCCAAGCTTTGGTCCGGTTACACCACCAGTTTCCCCAACTAAAAG
ACTGAAAGATAAAGTGACAAATATAGCGACTTTGAATCAAAACGGCAATAATTGTAAGACTATCGAGAACTTCAAGTGCA
AAGTATTAAATGACAAGACAGCAGCCACGACTGTGATAAACGTGAAATCAAAGACTGCGGAATCGAAAACCACGAAATTA
AGCGACAGACTCAAAATTTCTCCCACACATATTCCTCGAACACCTTCGTCGCCGACTAGGAATTATAACAACGGCAATAA
TGGAAACGTCCTCGCTTCGACCCCTCAATCTATCATCGATATGTCAAAAGTGTCGGATCCTCGAAAAGAGCTGGAAACTT
GTGCCAATATGATGAACTTATCATCACCTGTATACAGGATGTATTCGAAGAAAGACAAACATTCTGTCAAAGTCACCATC
TACGCCAGTGTGAAAGTTGGCGTGCACACATTCCATACGTTTCCAGAAGACGCGGCCACCGAGCAGGAAGCTGAGAAAAT
GGCGGCGCGACTGGCGTTGGTGAACCTCACGAAGGAGGCCGCGAGTCCCGAGGTGACGACCATCGACACGACAGTGGTGA
AGAAGCGGATTTTGAACATCGTGACGAGACACCACAGTGGAATCTTCATGCATCTGCTGCCCGAATATTATAACAAGGAG
CACGGCGAAGCTCTGCCTCACAACTGGGAGAGGATTATCGAGGAATGCACGGAGATGAACCAGGAGAAGGGCGTCGGCGA
TTTGACGATACTTTGCCGAACCTCTCAGGAATTGAAAGTAAAATACATTTTCTTCATTTCGAGGCGAAGTGTCGCGCTGG
AAATTAAGCGTTATCGATCCGACAGTAACAACCCGTCGTCCAGAGACACTTCTGAGATCATCTGTCTGTCTGGTGAGAAG
ATACAGTTGAGTCCGATCGGGCCCGCCGCGCCCGATAAATTGACAGTGCCAGAAGCGACTATCTGGCACGTGTGCGTCAC
TCATGTCGTGAACACCAAGGAAGTCTGGGTCCGGCTTGGCGACGACAATGACAGCTTTGTCGACATGATGAACGATATGA
AGAAGCACTACAGTCAAGAGAAGGAATCGGCCTCGGCGTCAGCAGGATGCATCGTCGGCCATTTTTACGCCGTTCAAGAG
GACGACTATTGGCATCGAGTCCAGTGTATAGAATCCGAGGCCGGACTCGTCACGGTTTTCTTCATCGACGAGGGATACGA
GGAGCAGTACAAATCCAATTTGCTGCATCCCTTGGAGAAGATATTCTGCATCCTTCCCGCTCAGGCGATTAGAGTGGCTC
TTCATGAACTGGTGGTCTTTCAAGATTACGCCCAGGCGACTACGGAAGTTGAAAATTATCTCATTTCCGATCGCATGTTT
TTAGCGACGGTGCACAGCACGGATACCGATGAATATGGTTCTTTTACAACAGTGACCTTTTACGACACCAGCAAAGAGGA
CGCGGACGAAAATGTGAACCAGATTGTATTCGACAAAATTTTAAATCACATCATCGCCTCGTCTAAAACCGCAGCGGGAG
AATTAATCAAATTATATGTTACACACATTGACAAGTTCGGTAAGGTCTATGCGCAGTTGGACACGCTCGTCAGGACTCTG
TTGAACGATGAGATTATATGTCAAGCATTCGCAAGCAATGCAGCGAATTCTTTGAAGGCACTTAACTTTACAAAGATATA
TCTTGTGAAGTGGAACTCACAGCTGTATAGAGCGAGGGTGACCGACATCCCCAACGATGGAGTAACGGCGACACAAATCT
ATCTGGACACCATCACTCCGTCGATGTATGACGATAAGCTCGTGGCCAGATTCCGCGAACTAGTCTCGGACACGGATCTG
CTTTTGGCAAAAGTCATCAGAATAGCATCCGGTGGAATACCGGTGGTGGAGATATTTAAGAGAGTCGGAACGAATGACAT
GCTGGCCTCCATTAATCAAGCAGTGAACTTGGACAGCCAGCTATTAAAAGTCAACGAAGACAGCAACAATAATATCAAGG
CCAAGAAACGCGTGGAACGCAGGAATTCTCGCGCCCTCGAGCCTGTCGGTAAATTGAATCCGCCCACGATCTCGGATATC
GGCCAGTACTTTGACGTTCACATAACGTTGGCCGCACATCCGGGACACTTTATCGTGCAACCATTAAATGATGCGAATGA
GCTGAAAGCAATGATGGAAGATCTGCAAAAGTGCTACATCACATACGATGGTCCATTGTTGGAAACTGTCAGCGAGGGCA
TGCTCTACGCGGGGATATTCAACAATGACTGGTACAGGGTATACGTCACCAATATTATCAGCGATAATGAAGTGTCTGTG
TACTTCTGTGACTTCGGTGATGTGACGATAGTGCAACACAGTAGTCTGCAGCCGTTGAAAAGCGAGTTCCTAAGATTGCC
GTATCAGGCAGTGAAGGCAAAACTTGTTGGAATAGAACCAATGAACAACGACTGGTTAGTAGGCGATTGTGTGAGGTTCA
AGGACTTGGTGCTGGACAAGAACTTCGTCTCGGTGGTCGTCGAATCGGTGTTTGACCACTTCTCTCCTGCTAACACCATG
CTCGGCTTAAGATTGATCGACGTCAGCACCGAGAAAGACATATACATTGACAGACTGTTGGTGGAAGAGAAGCGTGCCAA
ATTCATCGATGGATTCGAGGAGAATCTTTCGTCGTCTAGTTAG
PEP:
>LH23430-PA
MTDQEEVVKNLRSCLISCKGGIKLDNLWADYRMIAGEPLPYRQFGYPTVDAFVRTIPDITVTKRNGELYVEAVPSKNTAH
LTKLISRQKSTRRKVSKKKWSPPRYAARSFSPGFRTNNSSNFQSVKSSYVDSPGSFTKSTPGKSSLYTDFSRPIMPLMGT
RVQCPFPHNSENPSFGPVTPPVSPTKRLKDKVTNIATLNQNGNNCKTIENFKCKVLNDKTAATTVINVKSKTAESKTTKL
SDRLKISPTHIPRTPSSPTRNYNNGNNGNVLASTPQSIIDMSKVSDPRKELETCANMMNLSSPVYRMYSKKDKHSVKVTI
YASVKVGVHTFHTFPEDAATEQEAEKMAARLALVNLTKEAASPEVTTIDTTVVKKRILNIVTRHHSGIFMHLLPEYYNKE
HGEALPHNWERIIEECTEMNQEKGVGDLTILCRTSQELKVKYIFFISRRSVALEIKRYRSDSNNPSSRDTSEIICLSGEK
IQLSPIGPAAPDKLTVPEATIWHVCVTHVVNTKEVWVRLGDDNDSFVDMMNDMKKHYSQEKESASASAGCIVGHFYAVQE
DDYWHRVQCIESEAGLVTVFFIDEGYEEQYKSNLLHPLEKIFCILPAQAIRVALHELVVFQDYAQATTEVENYLISDRMF
LATVHSTDTDEYGSFTTVTFYDTSKEDADENVNQIVFDKILNHIIASSKTAAGELIKLYVTHIDKFGKVYAQLDTLVRTL
LNDEIICQAFASNAANSLKALNFTKIYLVKWNSQLYRARVTDIPNDGVTATQIYLDTITPSMYDDKLVARFRELVSDTDL
LLAKVIRIASGGIPVVEIFKRVGTNDMLASINQAVNLDSQLLKVNEDSNNNIKAKKRVERRNSRALEPVGKLNPPTISDI
GQYFDVHITLAAHPGHFIVQPLNDANELKAMMEDLQKCYITYDGPLLETVSEGMLYAGIFNNDWYRVYVTNIISDNEVSV
YFCDFGDVTIVQHSSLQPLKSEFLRLPYQAVKAKLVGIEPMNNDWLVGDCVRFKDLVLDKNFVSVVVESVFDHFSPANTM
LGLRLIDVSTEKDIYIDRLLVEEKRAKFIDGFEENLSSSS
Swiss-ProtTudor domain-containing protein 7B
KEGG     K18405     
SUPERFAMILYSSF63748  Tudor/PWWP/MBT superfamily     
Gene3DG3DSA:2.30.30.140     
PfamPF12872  OST-HTH; OST-HTH/LOTUS domain     
SMARTSM00333     
ProSiteProfilesPS50304  TUDOR; Tudor domain profile.     
CoilsCoil
OrthologiGroup-00679    Tudor domain-containing protein 7B      

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