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Gene detail [Fasta]

Species Linepithema humile
GeneLH11998
Positionscf7180001004574:410675..414728[GBrowse]
Ant Genomes Portalhttp://hymenopteragenome.org/cgi-bin/gb2/gbrowse/lhum_10/?name=LH11998
sequence mRNA: 
>LH11998-RA
ATGAGTCGTAGAAGAGTACACGAAGAAGATGATGGCTACGAAAGAGTATATAAAAAGCGTAGGAGAGTGTCGGAGAATCA
AGAGATTGAAGATCGTCTTGAATCTCTTATTCTCCGTGTTGGAGAGAAATCAACATCATCTTTGGAAAGTAACTTAGAAG
GATTGGCTTCTGTATTAGAAGCTGATCTGGGTTTATTCCGTAGTAAGATTCTTCGGATTTTAACAGACTGTGCTATTAAG
ATGCCAGAGAAGTGCACAATTTATACCACTCTTGTTGGTTTGCTGAATGCTAAAAATTTTAATTTTGGTGGGGAATTTGT
TGACTATATGGTAAAAAATTTCAAAGATTCACTGAAAGCATGCAAATGGGATGTAGCTAGATATTCTCTCAGATTTCTAG
CTGATTTAGTAAACTGTCATGTTTTATCATGTGGATCATTGATGCAATTGTTTGATAATATGCTGGATGCTGCAAATGAA
GATGGTGTACCACAAGTAAGACGTGACTGGTATGTTTACGCTGTTCTATCGACATTGCCATGGGTTGGGAGAGAATTATA
TGAGAAAAAGGAACAAGAATTGGATCACTTAATGGTCACAATAGAAATATTTTTGAACAAACGAAGTAAGAAACATCAGC
CAGCGTTAAGAGTTTGGTCAAGTGATACACCTCATCCCCAAGAGGAGTATCTAGATTGCTTATGGGCACAAGTTCGTAAG
CTAAGACAAGACAATTGGGCTGAGAAACATATTCCACGACCATATCTTGCGTTTGATTCAATTCTGTGTGAAGCATTGCA
ACATAATTTGCCGCCTTTAATGCCACCACCACATCATGAGTCTTATTCCTATCCATTGCCTACTGTTGTTTTTCGTATGT
TTGATTATACTGATTGTCCTGCTGAAGGACCATTATTACCAGGAAGCCATGCTATCGAGAGATTCCTAATAGAAGAGCAT
TTGCGGCAGATAATTAATAATTATTATTTTGAAAGAAAAGATTGTGCTGCACAACTATTGAACTTCCCATTCAAGGCCAA
AATTCCCTTAGATTATTGTATAGTTGAAGTGATATTCAGTGAACTGTTCAGACTGCCTACTCCAAAACATTTAGAGATTT
CTTATGGCTCAATTTTGATAGAACTCTGCAAGTTGCAACCTTCAACTATGCCACAGGTACTAGCGCAAGCCACAGAAATT
CTATTTCGTCGTATAGACAGTATGGCAGCTACTGCTTTTGACCGTTTTGTCTGGTGGTTTGCTTATCATTTAAGTAACTT
CCAGTTTCGTTGGTCATGGGAAGATTGGGATTCCTGCTTGCAACGTGATTCAGAACATCCAAGACCAAAATTTATACGAG
AAGTTTTGCTGAAAGCTTTGAGGTTATCATATTATCAAAGGATTCGAGATATGATGCCAGACACGTATGTGGATTTGATT
CCGGTAACTCCAGATCCTGTATACAAATATTCATCTGAAGGTGCCAGTTCACTTCCTGGTACAGTTGCAGCACATGAATT
GGTAGTTTCTATAAGACGCAAATGCACACCAGAAGAAGTATTAAATGTATTAAATACATTGCCAGGCCCTAAAGAAAATG
AAGAGACGAATAATTACAATCCTTTAAAGATCGATGTTTTTGTACAAACTTTACTGAATCTCGGCTCGAAAAGTTTCAGT
CACAGTTTTGCAGCTATAGTTAAGTTTCATTACGTTTTCAAGGTACTTGCTGAAACAGAAGAAGCACAAATATGTATATT
AAGAAACATGTATGCATTGTGGAAGAATCATTACCAAATGATGGTAGTATTAACGGATAAGTTTTTAAAAACCGGTATTA
TTGAGTGCAGTGCTATCGCTAACTGGATATTTTCCAAAGAGATGGCATCAGAGTTCACAAAGTTGTATATTTGGGAAATA
CTGCATTTGACAATACGTAAAATGAATAAACATGTGACAAAATTGAGTACAGAGTTAGCAGAGGCCAGGGAGAAATTAAG
AAGAGCGGAAAGTAGGTCAGGCTCGTCTTCGGAAGACGAAGACAATAACAAGGATAGAAATAGGGAGAGGCCATCTGAAG
ATGTAGTAGAACGAATGGAAGAGAAATTGGAAGCTGCACAAGCGGATCAGAAAAATTTATTTCTCATCATATTTCAGCGG
TTTATAATGATTCTCTCGGAACATTTAGTGCGCTGCGACACAGATGGAATTGACTACAATACGCATTGGTATAAATGGAC
TGTTGGGAGATTACAACAAGTTTTCTTATCCCATCAAGAGCAAGTACAAAAATACTCTTCAACATTGGAAACTTTGCTTT
TCACTCCAGATTTGGATCCTCATATTTTGGACGTATTCCATCAATTCGTTTCTTTACGGGCGTAA
PEP: 
>LH11998-PA
MSRRRVHEEDDGYERVYKKRRRVSENQEIEDRLESLILRVGEKSTSSLESNLEGLASVLEADLGLFRSKILRILTDCAIK
MPEKCTIYTTLVGLLNAKNFNFGGEFVDYMVKNFKDSLKACKWDVARYSLRFLADLVNCHVLSCGSLMQLFDNMLDAANE
DGVPQVRRDWYVYAVLSTLPWVGRELYEKKEQELDHLMVTIEIFLNKRSKKHQPALRVWSSDTPHPQEEYLDCLWAQVRK
LRQDNWAEKHIPRPYLAFDSILCEALQHNLPPLMPPPHHESYSYPLPTVVFRMFDYTDCPAEGPLLPGSHAIERFLIEEH
LRQIINNYYFERKDCAAQLLNFPFKAKIPLDYCIVEVIFSELFRLPTPKHLEISYGSILIELCKLQPSTMPQVLAQATEI
LFRRIDSMAATAFDRFVWWFAYHLSNFQFRWSWEDWDSCLQRDSEHPRPKFIREVLLKALRLSYYQRIRDMMPDTYVDLI
PVTPDPVYKYSSEGASSLPGTVAAHELVVSIRRKCTPEEVLNVLNTLPGPKENEETNNYNPLKIDVFVQTLLNLGSKSFS
HSFAAIVKFHYVFKVLAETEEAQICILRNMYALWKNHYQMMVVLTDKFLKTGIIECSAIANWIFSKEMASEFTKLYIWEI
LHLTIRKMNKHVTKLSTELAEAREKLRRAESRSGSSSEDEDNNKDRNRERPSEDVVERMEEKLEAAQADQKNLFLIIFQR
FIMILSEHLVRCDTDGIDYNTHWYKWTVGRLQQVFLSHQEQVQKYSSTLETLLFTPDLDPHILDVFHQFVSLRA
Swiss-ProtNuclear cap-binding protein subunit 1
KEGG     K12882  NCBP1, CBP80; nuclear cap-binding protein subunit 1     
SUPERFAMILYSSF48371  ARM repeat superfamily     
Gene3DG3DSA:1.25.40.180     
PfamPF09088  MIF4G_like; MIF4G like     
SMARTSM00543     
CoilsCoil
OrthologiGroup-00647    Nuclear cap-binding protein subunit     

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