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Gene detail [Fasta]

Species Linepithema humile
GeneLH14962
Positionscf7180001004838:334807..340640[GBrowse]
Ant Genomes Portalhttp://hymenopteragenome.org/cgi-bin/gb2/gbrowse/lhum_10/?name=LH14962
sequence mRNA:
>LH14962-RA
ATGTCGTCGGAGAAGGTCCTTTATAAACTAGACCAACCTCATGGCACTGGTAGTGTCCATATTTCTTGGCGACCTGGAAA
CAGCACACACTTAGCCACAACAGGTTGTGATTCTACAGTTGCCATCTACGATAGGCAAGGAGATATTCAAGACCGAATAC
AGATTTCTGGATTATGCACTGGCTTCGGTTGGGACTCGGACGGAGATCTCCTAGCAATAACATCGCAGAACTCATCAGTT
ATAATACTATGGGACGCCACAACCGGCAAAAAATTTCAAATAGATGCAGGTGTAAGAGATGGACTGACCTGTATGATGTG
GGCAAAGAAGAGCTGTTTGTTAGCAATAGGAACCCAAAAAGGAAATTTAGTGCTTTACGATCACATAAATGCCAGACGAA
TACCTATTTTGGGAAAGCACAAAAAACGCATTTTATGCGGCGCATGGTCAATAGACGGTCTTCTTGCCTTGGCGAGCGAG
GATAAGGTTTTAAGTATCAGCACAAGCGAAGGAGATACCCGTCGAGAGATAACTCTTCAAGGTGATCCGTCACATATACA
ATTTAGCGAGATGAAGATGGATCATAGGATAGGCGGTGAAAATACGGTATCCCTTATCGTTAGCAAAACGACGTTATTCT
TGTACAACATTTTGGACCCAGAAAATCCTATTGAACTGGCTTTTCAGAAACGTTATGGATCAATTGTAACTTATAAGTAC
GGTGATGGTTACATATTGGTAGGATTCGAAGCTGGCTTCTTTATAGCAATATCGACGCATATAAAGGAAGTTGGCCAAGA
ATTGTTTCAAATTAAAAACCACAGAGATACTTTGACAGATATCGCGTTGAGTCAAGTGGGCGGAAAGGTGGCAACTTGCG
GCGATAATGCCCTGAAGGTGCACAGTTTGCAAAATCTTGAAGAAACCGAAACACAGATCACGATAATCGGCGAAAGTGGG
ATCAGCAATATCGAATGGTCGACGGATGGAACTATGCTGGCAGTTGTTACTTACACCGGCAATGTCTTAATTTATTTAAT
AGAAATCCCAAAATTAACCAGCGTTTGTGGTAACAGAATAGCGTTACTAACAAGCCTGATGGAAGTAGCTGTACATCTTT
ATACATTAGACAAGGACAAACCATCTCCGCAAGTAATCAACACTATTATAGAACCAGCCATACTAGCAGTAGGTCCAGCG
CATTTAGCAGTAGGATTAAACAACAGAGCGCTTTTTTGGGATTTGTCTACGAGCCATTATAACAATATACATTTCGAGAG
GGACTATTTGGCTACGGTGGATAGTATGCGTTTGAATGAGATATACGTATCCGCGCTATTCGATGGGAAGCTACAGTTGC
ATTCGGTAATGAATAATAAATCTCACATTAAATCCGATGAGACTTTAATAAATAATGGAAAGGATACAAAGATGTTTCCA
GACTTAAATTCTTCCCATAGTAGAATAACGTGTCACGCTCTCTGTTCAGATTTCTTGGTTTACGGTAATGACATGGGTCA
CATCGTCTATTTTTACTTGGAGACGTTCACTCAATGTACCGAATTTATACATAACAACGGAATAAAGGAATTATACTTAG
ATGCGAATGGAACACAGTTGTGCTTCGTCGACAATAAGTCAGATGTTTACGTGTTCGATCCGATAAACGAAGCAGCCATT
GCAGTGCCAGATTATCCTGATAATATTGACGGTATTCTCTGGGATCAGAATATATTCGAACGTGCTATATTTGCAGTATA
CAACAAAAGCGTTATTGTAACGTATATTTTTGTAAAATACTTCGTTGAAGGTACCAAGGTAATAAAAATTAATTCAACTA
AATTGCCATTGGATTCAATTCCTTTACTGATGTATTCTGGCGAGATAACGTTGAGTTCAGTGGGCAGCAAATTAATACAA
ATAACATTAACTTCCCACGAAGATGTTGGGAATATCGTAGAGACCAAAAAAATTAACGACATTTTCGATAATCAGATCTT
GTGTAGACGGTTTCAACAAGCGTGGAACAGTTGTGAGAAATTAAACGAGAAAGATGCATGGCTAAAACTGGGTCAAAGCG
CTATTGCAAATTTAAATGTGGAATTTGCTATTCGCGTGTATCGGCAAATAGAAGATGCTGCAATGGTGTGGGCGTTGCAA
AGTATGGAAAATATAGACGAGATAGCATTGCTATGTGGCCATGCTTGCTTACTACTTGGCGATTACAACGAAGCAGAAAA
GTACTTTTTGCAATCGTCCGAACCCGTCCAGGCTTTGTACTTAAGGAGAGACTTAATGCAATGGGAACAAGCGTTGAGTT
TGGCACAGAAATTAAAACCCGACGAAATCCCTTTTATCGCCAGAGAGTACGCCCAGCAGTTGGAATTCACTGGGAACTAT
CCGAAAGCTTTAACAAATTACGAACGCGGTCTGGTTGATTACAACACCTCAGCAACTTTAGCTGCGCAGAATCCTAATCA
CCGAAGCCAATGTTTAGCGGGAATAGCGAGAATGTCTATAAGATGCGGCGATAGTAGAAAAGGCGTTGGTATAGCGATGG
ATAACGAGAACTCGAGATTATTACGGAAAGAATGTGCGGAGATTTTAGAATCGATGAAGCAATTTAGCGAAGCTGCCCAA
TTATACGAGAGATCTGAATACTTCGACAAAGCTGCTTCTGCGTACATAAAGTTAAAGAACTGGCACAAAGTGGGGCAGCT
TTTGCCGCAAATATCGTCGGCAAAAATTAACATACAATACGCTAAAGCCAAAGAGTCGGAGGGCAAATACGAGGAAGCTG
CGAAAGCATATGAAACCGCCAAGGATTACGATAACATAATTAGAATTAATCTGGAACATTTGAACAATCCCGCTCGTAGC
GTTGAAGTTGTTCAACAAACCAAGAGTATAGAAGGTGCGAAGATGGTCGCGAAATATTTCCAAAAGATGAATGATTACAA
TACAGCTATCAAATTCCTAATTTTATCAAATTGTCACGACGAAGCCTTTCAACTAGCCAATCAGCACGGCAAAATGGAAT
TGTATGGAGAAATCTTGGTGAACACGATCGATGACACTAACGTTCGAAGGGAAGACTTTAGGAGTCTCGCGATGCATTTT
GAGTCTCAGAAAAATAATCTTCTAGCCGGAAAATATTACTTCCACGCCAAAGAGTATCAGAAAGCCATGCGACATTTGTT
AAAAGCTGCGCAACTAGTACCGGACGATGATAAAGCGATTACTTATGCCATAGATACTGTCGCATCATCTAAGGATGATA
AATTAGCCAATCAATTAATAGATTTTTTATTAGGAAGCGACGGGTTGCCAAAGGATCCAAAATACCTATTCCGATTGTAC
ATGGCTCGAAAGCAATATAAAGAAGCAGCTAAAACAGCGATTATAATTGCGAATGAGGAGCAAATTAGTGGAAATTACCG
AAACGCTCACGACGTCCTGTTTGGAATGTACCAAGAATTGAAAAGGAATAAGATCGCCATACCTTTAGAGATGCAAACCA
ATTTAAGACTCTTGCATTCTTATATTCTAGTGAGATTACACGTGAAGAGAAGTGATCATCTACGAGGCGCCCGGATGCTA
ATAAGAGTAGCCAACAACATATCGAAATTTCCATCGCACATCGTGCCAATATTAACGTCAACCGTGATAGAATGCCATAG
AGCGGGCTTGAAAAACGCGGCTTTCAATTTTGCCGCTATGCTAATGCGTCCCGAGTATCGTGGGCAAGTCGACGTGAAGT
ACAGCAAAAAGATCGAAGCGATCGTGAGAAAACCGCCGAGAACGAAAGATATTGAGAACGAGGATGAGCCCCTCACACCG
TGCCCATACTGCAAGAGTAGAGTTCCGGAGACGGAAGTAACCTGTGATAAATGCAAAAATACCATACCTTTCTGCATCGC
GACGGGACGACATATCGTGGAGGATGATTTTGCAGTGTGTCCCCAATGTGATTTCCCTGCCATTAGAAGTGAATTTCTGA
GAATCATTGAATCTGAAGAAATTTGTCCAATGTGCTCAGCAAAGGTTTTACCTGAAGCTGTATCGTCCATCACTGATATC
TATCCATATCTTGACTATCAAGAGGAAAAAATCATCATAAAGGCATAA
PEP:
>LH14962-PA
MSSEKVLYKLDQPHGTGSVHISWRPGNSTHLATTGCDSTVAIYDRQGDIQDRIQISGLCTGFGWDSDGDLLAITSQNSSV
IILWDATTGKKFQIDAGVRDGLTCMMWAKKSCLLAIGTQKGNLVLYDHINARRIPILGKHKKRILCGAWSIDGLLALASE
DKVLSISTSEGDTRREITLQGDPSHIQFSEMKMDHRIGGENTVSLIVSKTTLFLYNILDPENPIELAFQKRYGSIVTYKY
GDGYILVGFEAGFFIAISTHIKEVGQELFQIKNHRDTLTDIALSQVGGKVATCGDNALKVHSLQNLEETETQITIIGESG
ISNIEWSTDGTMLAVVTYTGNVLIYLIEIPKLTSVCGNRIALLTSLMEVAVHLYTLDKDKPSPQVINTIIEPAILAVGPA
HLAVGLNNRALFWDLSTSHYNNIHFERDYLATVDSMRLNEIYVSALFDGKLQLHSVMNNKSHIKSDETLINNGKDTKMFP
DLNSSHSRITCHALCSDFLVYGNDMGHIVYFYLETFTQCTEFIHNNGIKELYLDANGTQLCFVDNKSDVYVFDPINEAAI
AVPDYPDNIDGILWDQNIFERAIFAVYNKSVIVTYIFVKYFVEGTKVIKINSTKLPLDSIPLLMYSGEITLSSVGSKLIQ
ITLTSHEDVGNIVETKKINDIFDNQILCRRFQQAWNSCEKLNEKDAWLKLGQSAIANLNVEFAIRVYRQIEDAAMVWALQ
SMENIDEIALLCGHACLLLGDYNEAEKYFLQSSEPVQALYLRRDLMQWEQALSLAQKLKPDEIPFIAREYAQQLEFTGNY
PKALTNYERGLVDYNTSATLAAQNPNHRSQCLAGIARMSIRCGDSRKGVGIAMDNENSRLLRKECAEILESMKQFSEAAQ
LYERSEYFDKAASAYIKLKNWHKVGQLLPQISSAKINIQYAKAKESEGKYEEAAKAYETAKDYDNIIRINLEHLNNPARS
VEVVQQTKSIEGAKMVAKYFQKMNDYNTAIKFLILSNCHDEAFQLANQHGKMELYGEILVNTIDDTNVRREDFRSLAMHF
ESQKNNLLAGKYYFHAKEYQKAMRHLLKAAQLVPDDDKAITYAIDTVASSKDDKLANQLIDFLLGSDGLPKDPKYLFRLY
MARKQYKEAAKTAIIIANEEQISGNYRNAHDVLFGMYQELKRNKIAIPLEMQTNLRLLHSYILVRLHVKRSDHLRGARML
IRVANNISKFPSHIVPILTSTVIECHRAGLKNAAFNFAAMLMRPEYRGQVDVKYSKKIEAIVRKPPRTKDIENEDEPLTP
CPYCKSRVPETEVTCDKCKNTIPFCIATGRHIVEDDFAVCPQCDFPAIRSEFLRIIESEEICPMCSAKVLPEAVSSITDI
YPYLDYQEEKIIIKA
Swiss-ProtWD repeat-containing protein 19
SUPERFAMILYSSF50978  WD40 repeat-like superfamily     
Gene3DG3DSA:2.130.10.10     
PfamPF07719  TPR_2; Tetratricopeptide repeat     
SMARTSM00320     
ProSiteProfilesPS50005  TPR; TPR repeat profile.     

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