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Gene detail [Fasta]

Species Linepithema humile
GeneLH19989
Positionscf7180001004981:108511..115776[GBrowse]
Ant Genomes Portalhttp://hymenopteragenome.org/cgi-bin/gb2/gbrowse/lhum_10/?name=LH19989
sequence mRNA: 
>LH19989-RA
ATGGACACTTTGGAACTGGCTCTAGTAGCTATTATTACATTCATCTGCGGTATACTATGTACCTTGGCGTTGGAAGTCTA
CTTGTTCAAGAGGTACCTAGAGTCAGGGCCTCAGGCTGCTTCACCGCAGAGGCAGCTGCAGCATGGCAAGGCGCAGTTAC
CTAAGGAGCTGGTGGAACAGATGCAGGAGGAACAGGCGAATTCCAACAATATGTCCCGCCAGGCAATGTCCCAAGGCAAT
GAGAACCTAGCGATCAATTTGACCCTGCAATTCCTCTTTAACGAGCTGCGAAACGCCGAACGAGTGCGCCTATGGCTTTA
TAGAAAGTTAAATAACGAGTTTAAGGAGCTGTTAACGCAGTCGACGACTGCCAAACTATTAGACAGCGTGAAGTTGAGAG
ACTTGAATTTAGGCACGCAATTTCCAACAATAAAGGGCTTGGAAGTCGCCGATTCGAAAATCGACGCCGACACTGGTTTG
CTGGAATCTTTGGACTTGGCCTTAGATCTACATTACTCAGGAAACTTTCAATTGTCTATAGATGTTAAAATGCTGCTCGG
TAAAACAGCCTATATGGCGTTGCAAGTAAAGCGCGTGAGCGGTAAAGCTAGGCTACAATTTACTCGTGTACCTTATACGC
ACTGGTCATTGAGCTTTTATTCGGACCCAATCTTGGAGTTGGAAGTGCAGTCGCAGTTCCAAGGTCGTCAGTTACAGCCG
CAGATAATTTCAATCATTACCAGCCAAATTAGGAAGGCGGTGAAACGAAAGCACACTCTACCTCGTTACAAAATGCGTTA
CAAGCCATTCTTCCGAAGATTAAACGATGAAGCCGTGGATCTCTCAGAAGTTGCTAGCACTCAACTCACTCCGGGATACT
TGGAGGTTGTATTGCTGGAGATCAGCAGACTAAATCTCGCGCCTATCACCTTCAACAGCGAGGACGGTATGTCGCAGGTG
GAAGTATATTGCACGATCAGCGTAGATTCCACTCCGTGGATATACTTGACGCAGTACAGCGGCGTCCCGTACATGGTGCT
CGACTTGATCATCAGCAAGACAGGCTCCCAGCAGCTGGGCGTGGTGTTCAAGCAGGAGGTCGTGCCGGAGATCGGTCAGA
TGTGCGTGCTAGTGGAAACCATAGTGTCCGGTAGCCCGGCGGCGATCGCCGAGATGAGGAAGGGCGACATTCTGGTGGCG
GTGGACGGCAAGAAGGTGTCGAGCATGAATCAAGTGGCGAAGTTCGTCAAGTCCGCCGTGCAGCGACGCTTCATCATCAG
GGTGGAGAGACGATACTCGAAGGCGGACTCGAGCGAGAGGGGGCAGAAAACGGACAGCGAGAGGACGTCTCTTGGCGAGA
GGAAAGCATCGAAGAGCATCGATTCCGTGTGCAGAGCAGGGGTGGACAGTCCGAACGCGGAAGACGCCGGGAAGATGAAG
TTCGAGACGCAAATCAAGTTCTCAGACTTACGGGACTCCGACGTCGATCTCGCGGACGTACGACCGGACACGAGCAAGCT
GAGGAAGAGCAGCATTCATACGGAAGACGCTGCTCAGACACCGGAAACCACGCCGTCTCGACGGATCTCGACGATCTCCA
CGTCGTCGGCGTCGTCCAGTAACGTTCAGTTTTATCTTTCGGACGACAGCAGCGCGATGAACGTCGCCGATTTGTACTAT
AGCACGAAGGAGAAGCCGTACGCTTCTCTTATCACCTTCGAGGAGACCAAGAGCTTTCGGATCGATTCCGAGCTGCAGTA
TCTGAACGTGGGCGTGTGGGGCCGCGTGAAGGGTGGTGAGACGCCCTCGAGATTGCTGGGCTACATAAACGCGCCTGTGA
AATTAATCCTGGCACAGTGCTGCACCTCTTCGACAGGACATTATTTGAAATGTCACGCCTTGTTGCCGCCGGAAAGTGCT
TCTTTGGCGACGTCCTACGTAAGATTACACGGCTACTCGGGATTCGATCCGACGCTCTGTTATGGCGACATTCTGCTGTC
ATATGTGTGGGAGTCTTGCCGACCAAGCGATCACGCGACTGGTGATTCTGGGAAGAAGGAGAACGCGGAAGCTGCCAAAA
CTCAACTGATCACGAGCGAAGAAGTCGCCGACAGAAAGATGCACGATTTTATCAGGACGCACTTCCACAGGGCGACGCAC
TGCGATTTTTGTACGAAAAAGATTTGGCTGAAGGATGCGGTGCAGTGTCGAGACTGCGGCATGGTATGTCACAAGAAATG
TGAGGCGCGCTGCCAAGCATCTGGTACGTGCGGCGCAGAGAGCCTAGCAACCCTGGCGATGGAGGCCGATGAGATCGAGC
CGAGCGTCGGGGATATCTCTAGCCCGGAGATCTCTCTGACCGGATGCGAAGATAATGTACAGGGCGCAAGTATGATGGCC
GTGAAGGCTAGTATAGCTAACACTCTGTTGGGCCTGAAGAAGGCTGGAAGTACCAGTTGCTTGGCCCCACCGGCTTCCGG
TATTGGTCTGGCATCTCGCAGTCTTCCCCCAAGTCCCTGTGCATCCCGCAAGAGTTCATTGGCCGGAGGTCTGGGAATAA
GTCCTGACCTCTTGGAGGGTGCTGAGCCAAGTGTTGCAGCTCCACTTGTAGCCGGTGACCTGGACGAGGGTCTCATGTCG
AGGGCCAGGGACACCGGCAAGTTCCTGTACAAGTATTTAGAGCCGCAGGAGCGTGTCGACAAAATCAACACTATGATGAC
CAAATTGAAGAACGCGCTGGACGCCGAAACTACCTCAAGATTAGAGTTATCCCACAATGGAGACGCGGATAGCATGAAGT
TGATCGCGCAAAGTGACCTACGAGTGCAGGCGCTAAGCGTGTTGCTTCTGCACTATTGCGCCGGCTTGCAGCATGCACAA
GAGGCATTGGATCGACCAGCAACCAACAAGGAATCTTAA
PEP: 
>LH19989-PA
MDTLELALVAIITFICGILCTLALEVYLFKRYLESGPQAASPQRQLQHGKAQLPKELVEQMQEEQANSNNMSRQAMSQGN
ENLAINLTLQFLFNELRNAERVRLWLYRKLNNEFKELLTQSTTAKLLDSVKLRDLNLGTQFPTIKGLEVADSKIDADTGL
LESLDLALDLHYSGNFQLSIDVKMLLGKTAYMALQVKRVSGKARLQFTRVPYTHWSLSFYSDPILELEVQSQFQGRQLQP
QIISIITSQIRKAVKRKHTLPRYKMRYKPFFRRLNDEAVDLSEVASTQLTPGYLEVVLLEISRLNLAPITFNSEDGMSQV
EVYCTISVDSTPWIYLTQYSGVPYMVLDLIISKTGSQQLGVVFKQEVVPEIGQMCVLVETIVSGSPAAIAEMRKGDILVA
VDGKKVSSMNQVAKFVKSAVQRRFIIRVERRYSKADSSERGQKTDSERTSLGERKASKSIDSVCRAGVDSPNAEDAGKMK
FETQIKFSDLRDSDVDLADVRPDTSKLRKSSIHTEDAAQTPETTPSRRISTISTSSASSSNVQFYLSDDSSAMNVADLYY
STKEKPYASLITFEETKSFRIDSELQYLNVGVWGRVKGGETPSRLLGYINAPVKLILAQCCTSSTGHYLKCHALLPPESA
SLATSYVRLHGYSGFDPTLCYGDILLSYVWESCRPSDHATGDSGKKENAEAAKTQLITSEEVADRKMHDFIRTHFHRATH
CDFCTKKIWLKDAVQCRDCGMVCHKKCEARCQASGTCGAESLATLAMEADEIEPSVGDISSPEISLTGCEDNVQGASMMA
VKASIANTLLGLKKAGSTSCLAPPASGIGLASRSLPPSPCASRKSSLAGGLGISPDLLEGAEPSVAAPLVAGDLDEGLMS
RARDTGKFLYKYLEPQERVDKINTMMTKLKNALDAETTSRLELSHNGDADSMKLIAQSDLRVQALSVLLLHYCAGLQHAQ
EALDRPATNKES
Swiss-ProtPDZ domain-containing protein 8
SUPERFAMILYSSF50156  PDZ domain-like superfamily     
Gene3DG3DSA:2.30.42.10     
PfamPF13180  PDZ_2; PDZ domain     
SMARTSM00228     
ProSiteProfilesPS50106  PDZ; PDZ domain profile.     
ProSitePatternsPS00479  ZF_DAG_PE_1; Zinc finger phorbol-ester/DAG-type signature.     

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