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Gene detail [Fasta]

Species Linepithema humile
GeneLH17744
Positionscf7180001004934:596122..600933[GBrowse]
Ant Genomes Portalhttp://hymenopteragenome.org/cgi-bin/gb2/gbrowse/lhum_10/?name=LH17744
sequence mRNA: 
>LH17744-RA
ATGGCTATTGTGATGAAAATACGGAATAATGAAGTGGTTTATCTAAATATACTTGCACCAAAATTAAAAGGTAGACCGCG
AAGAAAACGCAAAAAGCGCAGCACTTCGCCGGGTGAATCCTCGAACGAGAGCGAAGCTTCGGTAGCGTCGACGTCGAAGA
GCACGCCGGCGACTACCAGCACCAGTCTGGTGATACCCACGGTCGGGAGGCCACCTTCGTCCGCAATACGGCGGAGCGAG
AGGAAAACTAGCGTTGAGGAAAAGAAGTTTATCACGGACGTGCAGAGTTTTATGAACTCTCGGGGTACGCCGGTCGGAAA
GATGCCACTGCTGGGCTACAGGCAGATCGACCTGTACCTGTTCTACACAAAAGTGCAAATGCTCGGTGGTTACGACTCTG
TCAGTGCTGGTCGCCTTTGGAAGACCATTTACGACGATATCGGCGGCAACACGGGTTCCACTAGTGCAGCAACTATCACA
CGTAGACATTACGAAAAATTGTTATTACCTTACGAGAGGTATCAGCGAGGCGAAGAGACAACAGTGAGACTGAATCACGG
ACGACGTATTAAGAATATAAGCACGTCCGAGGATTTGGAAATCAAGGAAGAACCTAGCGATCCGTATTCGTCGGAGACAC
CTCCGCCTGTAGAAGCAATTTCTGCGACCACGACACCACCCTTGCAGCCAATAATGTCAGCAGCAGCGACGACTTTGCTT
TCGAATGAGAAACCCAAGACAGAGACGGGCAAAATATCCTCGTTGCGTAGTGTACGAGTGAAGCCGGAACGCCTCAAGTC
CCTGAATACAATGATCGCTAATAGCGCAACACCTTCCAGCCAAGCTAGCCAACTGCCAAGTCCACCGCCATCCTCCAACA
CGTCCACCTCGACACCCAACAGCACACCCTCCACAACGCCTACCAACGGTACGGGCAATAATCAGAGCGTCTTGGAGAGG
CAACTCAACAGTCCTTTGATATCCCAACAAGTACCACCATCGTGTTCGCCACCGGGCTTGCCCGTGACCAGCGTAGCGAC
GAACGCGTCAACCGTCGTCACTCTAACTCCACCGCCGGAGAAAGATATGAAAGAGATTAAGCTAGATTCGAAGCAGACAA
CCATACTGGCTCAGGGCAAGGAGAACATACCATTGTTCGGCGGTGAGAAACCTTTTTTTACGGAAAAGACGATGGTACCG
CCTGTCTCTAGGTCGCCCGAGGTGATTGATCTCGAGAATGAGAGCGATACGAGTCGGGACAAAATAATCATTCCCAGCTT
TAAAAAACGCAAACTTGAGATATTGCGAGAAGGTGGGCTAGAGGTTACCGCTGTCGATCTAGACACGCGGCCGAGTGTTA
TTCAGAGCAGCGTCACCGCGTCATCGCAGCAACAGCAACAGCAGCAGCAGCAGCAGCAACCGCCACCAGCCACGATGAGG
TCCGTCGAGGAGAAACAGCCGTCGATCTTGCCGTATCCCCATCCGGTCACGCCTAACTCTATTCCGAAACTAATATCCGT
CACCGTGACACCGGACATAGGACACATGTTGCCATCGCCGCAAGAACATCAAACTCATCAGTCGCGAATTTCAGCGGTTA
AGCAACCAGCTCATCATAATAACAACAACAACAGCACGATGAACAACAATAACGTGATGAATAGTCGGGTGATAAATCTC
GGTAGTTCGAATAACGCCGCGCTGCTTCAACTGTATGCGAACGCGAATGTCGTACCGCCTACCGCGGCGACGATTCCGCA
GCAATCGCACAATCGCTTCCTTCCGCCAAACGTTCCGAACGGCAGATTGCTACCGCCGAAAGTGACGCAGTCGAGGTCGA
TATTCGTGCACAACGAAAGGACCGTTTATGGAAATCCGAAAGAAATCCTCATCCCTCCAAAGTATCATCGTTCGTTGCAT
CCACATCAGCAGCAGCAACGCTCGCAGCATCCGCAGATGAGTGGCGGCAACGATAGCGGACAAGGAGGTGTACTCGATCT
GACGCAGAAACCTAACGAGAAACCGACGTTCCCCAGGCCCAGCCTGGAAATAGTAAGAGTACCTGTAGTGCCGAGGCCTA
ATCTTTTGAATATGGAAATGCGGAATTCACCCGTGGCCAAGGACAAACCGTCGGATAGACCTGCAGTCGACTGCACGAAG
CGAATACCTTTCCCCGCCTATCAGAACGTAATCGATAGTCGAACAATTGCTTCGAATAACCTCGAAATCACACTGGTGAA
TCCAAAGCAAAAGAATAATCACCACCTGAATACGGCACCGTCTCACGTTCAGATACCGAGTCCACCTAACAAGAGTAGTC
TGATGGGAACGATAAATAACGCGCATAGGAGGCACCCGCAACCGCATCAAATGAACGGGAAGTATCCGACAAGAAACGAA
CCGGTCTCGCCATATACACCGAGGAAGTCGAATCATCCTGTCATACCCAACATACCTAATTTAAATCACCTGAATCATAG
TGGAAGTCCGTCGTACCCTAGGATGCAGGCGACGACGATGCAGCAACAACAGCAGATGAGCATCGACAGGAGGAAAGCGG
CCGCAGAAGCCGCCAGGGATCATCAACAACGTAGGATCAGCGAGGGTGAGAAATCCTTGGCGGCGCAGCATCAGCAGCAA
CAGCAACAGGATTGCAGAAGCGAAGTCGGCCGACGACACAGTTTACCAAGCATACCGTCCGGCTTCGTGCCGACAGTACC
ACAAAACAATTCCGCCGCTTTTCCGTTTGCGCAAATGCCAAACGTGCCCGGCAAGTTCCTACCGATGCTGGACCCTATGT
ACTACTCGTTTTACAACGGCTTACTCCCACCGCCGATTCCGCCCACGCCCACAGCCGCGGCCGCCGCTGCGACGTCGTTT
TTGTCGCCAGAACTTAGCGCGTATTACAATGAACTATTCGCTTCCTCGCAACCAAGACTGACGGGGATGACGGGGCAGCC
GCCGCCGCCGCATCAGCAGCCGGCTGCCCCAACGTCTAAGTAG
PEP: 
>LH17744-PA
MAIVMKIRNNEVVYLNILAPKLKGRPRRKRKKRSTSPGESSNESEASVASTSKSTPATTSTSLVIPTVGRPPSSAIRRSE
RKTSVEEKKFITDVQSFMNSRGTPVGKMPLLGYRQIDLYLFYTKVQMLGGYDSVSAGRLWKTIYDDIGGNTGSTSAATIT
RRHYEKLLLPYERYQRGEETTVRLNHGRRIKNISTSEDLEIKEEPSDPYSSETPPPVEAISATTTPPLQPIMSAAATTLL
SNEKPKTETGKISSLRSVRVKPERLKSLNTMIANSATPSSQASQLPSPPPSSNTSTSTPNSTPSTTPTNGTGNNQSVLER
QLNSPLISQQVPPSCSPPGLPVTSVATNASTVVTLTPPPEKDMKEIKLDSKQTTILAQGKENIPLFGGEKPFFTEKTMVP
PVSRSPEVIDLENESDTSRDKIIIPSFKKRKLEILREGGLEVTAVDLDTRPSVIQSSVTASSQQQQQQQQQQQPPPATMR
SVEEKQPSILPYPHPVTPNSIPKLISVTVTPDIGHMLPSPQEHQTHQSRISAVKQPAHHNNNNNSTMNNNNVMNSRVINL
GSSNNAALLQLYANANVVPPTAATIPQQSHNRFLPPNVPNGRLLPPKVTQSRSIFVHNERTVYGNPKEILIPPKYHRSLH
PHQQQQRSQHPQMSGGNDSGQGGVLDLTQKPNEKPTFPRPSLEIVRVPVVPRPNLLNMEMRNSPVAKDKPSDRPAVDCTK
RIPFPAYQNVIDSRTIASNNLEITLVNPKQKNNHHLNTAPSHVQIPSPPNKSSLMGTINNAHRRHPQPHQMNGKYPTRNE
PVSPYTPRKSNHPVIPNIPNLNHLNHSGSPSYPRMQATTMQQQQQMSIDRRKAAAEAARDHQQRRISEGEKSLAAQHQQQ
QQQDCRSEVGRRHSLPSIPSGFVPTVPQNNSAAFPFAQMPNVPGKFLPMLDPMYYSFYNGLLPPPIPPTPTAAAAAATSF
LSPELSAYYNELFASSQPRLTGMTGQPPPPHQQPAAPTSK
Swiss-ProtAT-rich interactive domain-containing protein 5B
SUPERFAMILYSSF46774  ARID-like superfamily     
Gene3DG3DSA:1.10.150.60     
PfamPF01388  ARID; ARID/BRIGHT DNA binding domain     
SMARTSM01014     
ProSiteProfilesPS51011  ARID; ARID domain profile.     

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