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Gene detail [Fasta]

Species Linepithema humile
GeneLH17894
Positionscf7180001004934:3232811..3240156[GBrowse]
Ant Genomes Portalhttp://hymenopteragenome.org/cgi-bin/gb2/gbrowse/lhum_10/?name=LH17894
sequence mRNA: 
>LH17894-RA
ATGGACTCGTCCGATCTCAGTCTACACTATCCAATCATATCAGAACGCAGTGGCGGAACAATAAGTATCACATCCTGCTT
CGGGATGGCCGACGATACAACAATTGCCCACGAGGACAACGATAACAACGGTTGCATGGCGTCACTGCCATCGCCTCCTC
TCACCGTCTTCGAAATTGAGTGTAAACCAGAACCATGCTCCAATTTAAATAATTCGATCGAGGATTTCTCAACATTTGAT
GAATCCTCAACATTATACATTCCGGTAACTACACCTACAATAAAAAATCCAATTGTTTTGTTAGAAAGATGTGATAAAAT
TTGGGAAACATTACAGTTAATAAAGACTGTACAAATTGACAACTCAACAACAATAAAAATTGAAGAGGATTATAATGAAA
ATGAAAAAGAGAAGGAAACGCAGGCAGAAGTAGAGGAACAAGTAGAGGAACAAGTAGAGGAACAAGTAGGAGAACATTCA
AATGAAGCTGTACAACCTATATCCTATAGGAAGCATCAACGAGCATTGAGAAATAAAATAGTGCCATTACCTTTCAAGTT
TTCTGTTCAAAGAACAAAGAAGTTATTTCCTTGTGAAACATGTGGTAAACAATATTTGGAAAGACGGTCCTTAAGAAAAC
ATTCAGAAAGAATACATGGAATTATTCTCCCATTACAACGTAAATATAAACGTGCTAATAAGATTTTAATTCCTAAAAGG
AATTTGAACGATATCAATTCGGTCGCTAGCGAAAAAAGTGATAATTCGAAAAAACGTGATTATAACACAGATTCATATAG
AAAGATTACTGCAGAAACAAAACTTAAGAGTGTGGAAAGTATTGCTCAACAATCTACTCTATCGAAACGATTTGTTCGTT
GTGCGTTATGTCAACAAAAAGTAATGTCTATAAGAAAACATTTGACTCATTATCACAAAATTGGTGGTTCTTCAAGTATG
ATGGAACAGTTAGAATCGTCGTTAATAATTGAAAATAAAAAATTACCTAAAAATAAGAAAACTACATTAAAAAATATATT
GTCCGGTGAACTTCCTAGTACGACACGTAATGAAGAAAATACTAGTAAAACATCTTCAGTCAAGAGAAAACAACACAATA
TATCATTCTACCTAAATACTACCAAAAGACTGAAGTTGGACAATGAGCGTTCATTTGTTAGTAATATGCCTACTACTGCG
CAACAAAAGTTTAATTTAAATGTTACATCATACAAATGTGACATTTGCTTAGGAATGTATTCATCTGCTCATAGTTTGTA
CAAACATAAACGCAATCATCTTTATCGTGGAGAAACTAAAGAAAATTTTCATAAGTTTAAATGTAGATATCTTAATTCGC
CATTAAATAAGAGATATAAATTATTGAAATCTTCAACTGATACCACTGTAAACAATATTAGTAATGATATAAATAATTCC
AAGTCCAAGACATTGTTAGGTCAAAACAGCAAGACTTCTGACGATAATCGAATAGCTCATTACAACGGAACAAGAAGAAG
AAGAAATAGCAATGAAACTACTTGCATATGTGGAAGATCATTTCGAAATCCTCATACTTTATTTGTTCATAAAGAAAAAT
GTAAATTATGTATGCAGGAAGATCAACTAGAACAGCTGAGTGATGATAGAGATTCTACAAACGGTATTAGCATAACAATT
AAGAAACGAAATGATTCCTACGAGATAGTTGGTAAAGATAATGATAATGAAAATGCACTCCAAGAATCTATTCCTGTCGA
TGGAGATGTTTCATCTAATATACCTGACACGTTCAATTCTATTCTCAAAAGTACTGATGCATCGACTACACAAGAAGAAT
TAGATTCGTCCAAATCATCTAATTATAGTAAAGATCATAGCATTTTGAAGTTACAGGTTACAGAAGAAGATGTGATCATC
GACATCGAAGATGATGTACAAATTGATGTTGATAAGAATAATACAGCGCGACAAGTAGTTATGCAAGAAGATGATAAAAA
GTGTTCATCAAAGCAGCAAGATAAGAATAAGAAGAATGTGAAGAAACAACCAGTTTTTGATCAAGTCTGTACTTTGAGAG
AAATGTGTCAAGAAGTTCTTGACGTTCTTGAGAAGCCCAAAATCGATGCAGTAGGAAACAAAACTCAAGAAAACAACCAG
ATTAATGATAAAAATCAAGATGTACATCAGGAAATGCATCAGGAAAATAAGAGAGCATTAAGATCTTCAGATAGACGTCG
TCAAAGTACCAAAAAAGAGTTCGATTATTCATACGATGGAATAAAAGTTGGTACATTTGATCCATTATCGGCATGTGGAT
ATTGTGATGAAGAGTTTGACATGATCAATTCATACGATAATCACGAATGTACTGTTAAAGAGGGAAAAACATTCGATGAA
TTTTCATTACAATTAGTGTGTTTTTATTGTAAAGATATACTAAATAATTATAGCGACTACGACAAGCATATAAAAGTCAA
ACATTTTGATAATGCTTATCATTGTTACCAATGCACCGAACGATTCACGACTGATAAAGCACGACTACATCATTTTCATA
GAGAGCACAATGATTCGTTTTGTAGATTTTGTAATAAAAAGATGTCTATTTCAGTGAAAATTTTACACGAAGGTTATCAT
CTAGGTTTCGGCTATCCCTGTCATAGATGTAAAAAAGCTTATACGCTGAAAAGAAATCTCTCTTATCATACATCAACGAT
ACATGCGAAAGAAGCCGATAATCTAATAACTTGTAGCATATGTTTGAGATTCGTGAAACTTAAAACTTTCCGACGTCATA
TGAATAATCATAAGCATAATGCATGTCATTTTTGCGGCAAATTATTCTCGAATAGAACAGGTTTAGAACTCCATACTTTG
ATACAGCATGCGGCGCTGCAAGTGATACATGAAGTTGGTCGCAACATTTTCAGTAATTCGCTTCGTCATTACGGGACGCC
GCAAAGGGCTCTAGGCGTCGCCTTTAGCGACCGAGTGATCAAAGTCATACAGAGTGTCAGGGAGGGCGGTCGCGTTACAT
TACTTTCTTCGTAG
PEP: 
>LH17894-PA
MDSSDLSLHYPIISERSGGTISITSCFGMADDTTIAHEDNDNNGCMASLPSPPLTVFEIECKPEPCSNLNNSIEDFSTFD
ESSTLYIPVTTPTIKNPIVLLERCDKIWETLQLIKTVQIDNSTTIKIEEDYNENEKEKETQAEVEEQVEEQVEEQVGEHS
NEAVQPISYRKHQRALRNKIVPLPFKFSVQRTKKLFPCETCGKQYLERRSLRKHSERIHGIILPLQRKYKRANKILIPKR
NLNDINSVASEKSDNSKKRDYNTDSYRKITAETKLKSVESIAQQSTLSKRFVRCALCQQKVMSIRKHLTHYHKIGGSSSM
MEQLESSLIIENKKLPKNKKTTLKNILSGELPSTTRNEENTSKTSSVKRKQHNISFYLNTTKRLKLDNERSFVSNMPTTA
QQKFNLNVTSYKCDICLGMYSSAHSLYKHKRNHLYRGETKENFHKFKCRYLNSPLNKRYKLLKSSTDTTVNNISNDINNS
KSKTLLGQNSKTSDDNRIAHYNGTRRRRNSNETTCICGRSFRNPHTLFVHKEKCKLCMQEDQLEQLSDDRDSTNGISITI
KKRNDSYEIVGKDNDNENALQESIPVDGDVSSNIPDTFNSILKSTDASTTQEELDSSKSSNYSKDHSILKLQVTEEDVII
DIEDDVQIDVDKNNTARQVVMQEDDKKCSSKQQDKNKKNVKKQPVFDQVCTLREMCQEVLDVLEKPKIDAVGNKTQENNQ
INDKNQDVHQEMHQENKRALRSSDRRRQSTKKEFDYSYDGIKVGTFDPLSACGYCDEEFDMINSYDNHECTVKEGKTFDE
FSLQLVCFYCKDILNNYSDYDKHIKVKHFDNAYHCYQCTERFTTDKARLHHFHREHNDSFCRFCNKKMSISVKILHEGYH
LGFGYPCHRCKKAYTLKRNLSYHTSTIHAKEADNLITCSICLRFVKLKTFRRHMNNHKHNACHFCGKLFSNRTGLELHTL
IQHAALQVIHEVGRNIFSNSLRHYGTPQRALGVAFSDRVIKVIQSVREGGRVTLLSS
Swiss-ProtZinc finger and BTB domain-containing protein 40
SUPERFAMILYSSF57667  beta-beta-alpha zinc fingers superfamily     
SMARTSM00355     
ProSiteProfilesPS50157  ZINC_FINGER_C2H2_2; Zinc finger C2H2 type domain profile.     
CoilsCoil
ProSitePatternsPS00028  ZINC_FINGER_C2H2_1; Zinc finger C2H2 type domain signature.     

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