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Gene detail [Fasta]

Species Linepithema humile
GeneLH17188
Positionscf7180001004926:682868..685335[GBrowse]
Ant Genomes Portalhttp://hymenopteragenome.org/cgi-bin/gb2/gbrowse/lhum_10/?name=LH17188
sequence mRNA: 
>LH17188-RA
AAAGTCTGAATGTGTTATGAGTTATATTATCTAGAAGTGAGAGAAAGTTTGTTTTATGTACATATAAACTATAAGATATT
TGAAAATGTCAATTGAAATTGAATCTGCCGATGTGATCAGATTAATACAGCAATATTTGAAAGAATCAAATCTTGTAAAG
ACACTGCAAACTTTACAGGAGGAAACAGGTGTGTCACTGAACACTGTCGACAGTGTGGATGGATTTGTTGCTGACATAAA
TAATGGCCATTGGGACACAGTTTTAAAAGCTATACAATCGTTAAAATTACCTGACAAGAAGCTTATAGATCTGTATGAAC
AGGTTGTTCTAGAATTGATTGAACTAAGAGAATTAGGTGCAGCACGTTCCTTATTAAGACAGACTGATCCTATGATTATG
ATGAAGCAACAAGAACCTGAGAGATATATTCATTTAGAAAATCTACTTGCGCGTTCGTATTTTGATCCACGCGAAGCATA
TCCCGATGGAAGCACAAAAGAAAAACGAAGAGCATACATAGCAACTGCTCTTGCTGGCGAAGTGTCAGTGGTACCTTCCA
GCAGGTTGCTCGCTCTGTTGGGACAAGCATTAAAGTGGCAGCAACATCAAGGTCTGCTACCGCCAGGAACCACAATAGAT
TTGTTCAGAGGAAAAGCAGCGGTTCGCGATCAAGAAGACGAGAAATATCCGACACAACTTTCAAAGCAGATCAAATTTGG
CCAGAAGTCGCATGTGGAGTGCGCACGTTTCTCGCCAGACGGTCAGTACTTGGTGACCGGTTCGGTGGACGGTTTTATTG
AAGTGTGGAACTTTACGACTGGCAAGATTAGGAAAGACTTGAAGTATCAGGCGCAAGACAACTTTATGATGATGGAGCAA
GCGGTGCTGTCGATGTCGTTCAGCCGCGACAGCGAGATGTTGGCGGGCGGCGGTCAAGACGGTAAGATCAAGGTCTGGAG
AGTGCAGAGCGGTCAGTGCTTAAGAAGATTCGAAAAGGCGCATTCGAAAGGAGTGACCTGTTTACAGTTCAGCAGAGACA
ATAGTCAAATTCTATCGACTTCATTTGACACAACTATAAGAATACACGGCCTTAAGTCGGGAAAAACGCTGAAGGAATTC
CGCGGTCACGGTTCGTTCGTTAATGAGGTCGTTTTTTCTCCAGACGGCCATAACATAATCAGCGCCTCGTCGGATGGGAC
TGTAAAAATTTGGAGCTTAAAGACTACCGAATGCATAGGCACTTACAAATCATTAGGAGCCGCCGATCTCACAGTGAACA
GCGTACATACTCTTCCGCGAAATCCGGAGCACTTTGTCGTGTGCAATCGTTCCAATACCGTAGTAATCATGAACATGCAA
GGACAAATAGTGAGATCCTTCTCCAGCGGTAAACGAGAAGGTGGCGACTTTGTATGCACGGTGGTGAGCCCGCGCGGCGA
ATTTATCTACTGCGTCGGTGAAGATCTCGTGCTGTACTGTTTCTCCACGTCGTCGGGAAAACTCGAGAGAACGCTCAATA
TACACGAAAAGGACGTGATCGGCTTGGCGCATCATCCTCATCAAAATTTATTATGCTCGTACAGTGAGGATGGTTTGTTG
AAATTGTGGAAGCCGTAAAATAATCGAGAACTTTTATTTCTTTTTTACTTGAGTGCAGTTTGGAGAACTTGCCTGACTTC
AGGACCTGTAATATATACATTTTTGAAAGTGACTATGATAATCGTCTTGTGAATTGGTCAAGAATTTGTGCGGTTTGACG
ATTCATCTATTCTTTCTAATATTATCTATACCCGTCAATAGAAAATATACGTAATTTCGAC
PEP: 
>LH17188-PA
MSIEIESADVIRLIQQYLKESNLVKTLQTLQEETGVSLNTVDSVDGFVADINNGHWDTVLKAIQSLKLPDKKLIDLYEQV
VLELIELRELGAARSLLRQTDPMIMMKQQEPERYIHLENLLARSYFDPREAYPDGSTKEKRRAYIATALAGEVSVVPSSR
LLALLGQALKWQQHQGLLPPGTTIDLFRGKAAVRDQEDEKYPTQLSKQIKFGQKSHVECARFSPDGQYLVTGSVDGFIEV
WNFTTGKIRKDLKYQAQDNFMMMEQAVLSMSFSRDSEMLAGGGQDGKIKVWRVQSGQCLRRFEKAHSKGVTCLQFSRDNS
QILSTSFDTTIRIHGLKSGKTLKEFRGHGSFVNEVVFSPDGHNIISASSDGTVKIWSLKTTECIGTYKSLGAADLTVNSV
HTLPRNPEHFVVCNRSNTVVIMNMQGQIVRSFSSGKREGGDFVCTVVSPRGEFIYCVGEDLVLYCFSTSSGKLERTLNIH
EKDVIGLAHHPHQNLLCSYSEDGLLKLWKP
Swiss-ProtWD40 repeat-containing protein SMU1
KEGG     K13111     
SUPERFAMILYSSF50978  WD40 repeat-like superfamily     
Gene3DG3DSA:2.130.10.10     
PfamPF00400  WD40; WD domain, G-beta repeat     
SMARTSM00668     
ProSiteProfilesPS50897  CTLH; C-terminal to LisH (CTLH) motif profile.     
PRINTSPR00320     
ProSitePatternsPS00678  WD_REPEATS_1; Trp-Asp (WD) repeats signature.     

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