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Gene detail [Fasta]

Species Linepithema humile
GeneLH21445
Positionscf7180001005009:168665..172558[GBrowse]
Ant Genomes Portalhttp://hymenopteragenome.org/cgi-bin/gb2/gbrowse/lhum_10/?name=LH21445
sequence mRNA: 
>LH21445-RA
ATTTTTGGCGGGCCAAATAGCAGCTTGTACTTTGCCCTTTAATTATTTCTCGAATTAGCGAATCTGTGAAGGATAAATGA
TGGCAGACAAGGACGGCGAGGGTTTTGATGATGCAGTGGAGGAACGTATTATCAATGAAGAGTACAAGATATGGAAAAAG
AACACACCATTTCTTTACGACCTTGTAATGACACATGCTTTGGAGTGGCCTTCTCTGACAGCTCAATGGCTTCCAGATGT
TACTCGACCCGAAGGGAAGGATTATTCAGTCCATCGGCTGATTCTGGGCACTCATACTTCGGATGAACAAAATCATTTGC
TTATTGCTAGCGTACAATTACCAAATGAAGATGCGCAATTTGATGCTTCTCATTATGATAATGAAAAGGGAGAATTTGGT
GGATTTGGTTCTGTAAGTGGCAAAATCGAAATTGAGATCAAGATCAATCACGAGGGCGAAGTCAACAGGGCTCGATACAT
GCCACAGAACCCATGTGTAATTGCAACGAAAACTCCCTCAAGTGATGTGCTAGTATTTGACTACACGAAACATCCTAGTA
AACCGGATCCCAATGGCGAATGTCATCCAGATTTGAGATTGCGAGGACATCAAAAGGAAGGTTATGGCCTTTCATGGAAT
CCAAATCTTAACGGATACTTATTGAGCGCATCCGACGATCACACAATTTGCTTGTGGGATATCAACGCGACACCGAAGGA
GAATCGTGTTATCGACGCGAAAACCATCTTCACGGGTCACACAGCTGTGGTCGAGGATGTCGCTTGGCATCTATTGCACG
AATCGTTATTTGGTTCTGTTGCTGATGATCAAAAACTGATGATTTGGGATACTAGGTGCAACAATACCAGCAAACCGAGT
CACACCGTTGACGCTCACACTGCCGAAGTAAATTGCTTGAGCTTCAATCCGTATTCTGAATTCATACTGGCAACTGGTAG
TGCGGATAAGACTGTAGCACTGTGGGACTTGCGAAATCTCAAATTGAAATTACATTCATTCGAATCGCATAAGGATGAAA
TTTTCCAAGTTCAATGGTCACCTCATAATGAGACGATACTAGCTAGCAGTGGAACAGATAGACGACTACATGTTTGGGAT
CTTAGCAAAATCGGCGAGGAACAATCGAGCGAAGATGCAGAGGATGGGCCACCTGAACTTCTGTTCATACACGGAGGCCA
TACTGCGAAGATTAGTGACTTCTCGTGGAATCCGAATGAACCGTGGGTCATTTGTTCAGTGTCTGAGGACAATATAATGC
AAGTTTGGCAAATGGCAGAGAATATTTACAACGATGAGGAACCCGAGACACCTGGGAGCGAAATCGAGACCGGTGGTTCA
TAATGAGGATAAACATAATTGATCCTGTTATTTTTCCATCGCCGATTGAGATACAAGTACCAAGCCATGGTTGCGATATT
TGTCTCGTGACAGATTTCTTTTTACGAAGAAGCAATAATTCTTGCTTTTCGGATCCTTGCTAAATCCATTGGTTACATAA
ATTGCGCGAAAATGTTACAACTAGAAAAAGAAAAAAAAATTCTATCGATATTTTCCACCACATTTTGAACAGATGATAAA
ATACATAAATTCATTTTATTAAATCTGACTAAACGCGTTTGCATTTCTAATTGATAATTTTGCAACGAAATATAAAAACA
ACTGGGAATGATTCAAAATAATAAGAACGGCGAGCATTATTGTTTCGCGGTGATTAATTAGATATGTCACAAACCCAACG
GAATCAATTAACCAATTAAAAACTCAACTAGCTGAATAACGGCTAGTTATACATTTGTTATAAACCATTTTTTCATATAA
AGGTACTATTTCTCTGTCACAGCGGAAGCTCACGTAACACCTAGAAAATACCAAGTACTTTTTCTACTTCGTTTTAAGTA
TGAATAATAAAGAA
PEP: 
>LH21445-PA
MMADKDGEGFDDAVEERIINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDYSVHRLILGTHTSDEQNH
LLIASVQLPNEDAQFDASHYDNEKGEFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHP
SKPDPNGECHPDLRLRGHQKEGYGLSWNPNLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDVAWHLL
HESLFGSVADDQKLMIWDTRCNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKD
EIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSSEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNI
MQVWQMAENIYNDEEPETPGSEIETGGS
Swiss-ProtProbable histone-binding protein Caf1
KEGG     K10752     
SUPERFAMILYSSF50978  WD40 repeat-like superfamily     
Gene3DG3DSA:2.130.10.10     
PfamPF00400  WD40; WD domain, G-beta repeat     
SMARTSM00320     
ProSiteProfilesPS50082  WD_REPEATS_2; Trp-Asp (WD) repeats profile.     
ProSitePatternsPS00678  WD_REPEATS_1; Trp-Asp (WD) repeats signature.     

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