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Gene detail [Fasta]

Species Linepithema humile
GeneLH14196
Positionscf7180001004755:4426156..4433393[GBrowse]
Ant Genomes Portalhttp://hymenopteragenome.org/cgi-bin/gb2/gbrowse/lhum_10/?name=LH14196
sequence mRNA: 
>LH14196-RA
ATGAAACGGACGCCTTTTATGTTGCAGACATTCAGACACGGCTTCCCGCATCAGCCGACAGCGCTGGCATTCGACCCAGT
TCAAAGGCTCCTAGCTATTGGCACTAAATCAGGATCCCTCAGGATGTATCCTTTGACATTACCGTTAATGCGCCGGCATC
CCGTAATTAAGCGTCTTCTTTTTTCTGAAACGAGAAAGATATATATAACTCAATTCGAAAACGGCGCGAGAGATTGTTTG
GGCAGACCGGGCGTAGATGCACACGTTAAGCACGAGGGATGCGCGGCTGTAATACAATTACAGTTCTTGATCAACGAAGG
AGCATTGGTGTCCGCTACGGCGGACGACACCCTGCATTTGTGGAACTTTCGTCAGAAGATACCGCAGGTGGTGCAGAGTC
TCAAGTTTCAAAGAGACAGATCTAGAAAGACCCATCCTGGTGCTGTAGTACACTTGAGTGATAATCCTTTAGATTTGAGC
AAGATGCTTATAGGATATGCGACAGGGCAGATTGTTCTATGGGATTTAAAAACTAAAAATGCCGACTACAGATGTCAAAC
GGATGACCCGTTGAAATCGATAACATGGCACCACGAAGGTAAACAATTTATGTGCAGTCACACGGACGGTTCTCTTTCGA
CTTGGACTGTTCGGCAGTTGAAGCCAACAAACGTGACATATCCGCATGCAAAATCCACTAAAGACGGAGAACCTGAACCT
TGTAAACCCATTCAAAAAGTAGAATGGAAATTGTCGAGATCAGGGGAAGCGTATGTGATATTTTCTGGTGGATTAGCATA
TGACACTACTGGGAGAACACCCAGCATTACCGTGATACATGGAAAAACTACCACGGTGCTCGAAATGGAACATAATGTTA
TAGACTTTGTAACGCTGTGTGATAGTCCATGGGCTAGTGATTTTCAAGATCCTTACGCTGTTGTTGTTCTACTACAAAAT
GACCTGGTTGTGATAGATTTGTTAACTTCTGGATTCCCGTGTTTTGAGAATCCGTACCCTATGGATATTCACGAATCACC
CGTGACATGTTGCTCGTACTTCGCGGATTGTCCTTCGGATCTAGTACCTGCGTTTTATTCCGTTGGATCGAAGTCGCAGA
AGAAAACCGGCTTCAGCGAGAAAGAATGGCCTATTTCCGGTGGAGAATGGAGTTCTAGTTCTAGCAGTTATAACGAGATT
ATTCTTACTGGACATGCCGACGGCAGTATAAAGTTTTGGGACGCTTCTGCGGGAACATTACAAGTCCTTTACAAACTAAA
GACGGCGAAACTTTTTGAAAAAACTAGAACGCGTAGTATAGATTCCGAGGAAGACCCGTTAGCGATTCAACTTATCTTCC
TTTGTCCTGAAAGTCGGAAATTAGCTATTGCGGGAAGTGGCAAGCACGTTGTGTTGTTTAAATTTAAGAAGGTTGAGAGT
ATGTCCGAAGTAGTGACTTTGGAAATATGCTTATCGGCGGATCCTGGGAGAGAAGGGGACAATTCACCGGATCGCGAATC
TCCGGCAACCGGCAACATCGTGGAGTCGAAGATTACGGAATTCAATCATCCCCTCAAAGTCAAGACGGGTTTGCAGAAAA
GGGCTGCCGGTTTTCAAGCAACATTGATCTGTTTGACGACAGCACCTAGCGGAGAGCAACCGGAGAATATAACATCCCTT
AGTTTAAATTCCTCATACGGCCTATTGGCCTACGGAAACGAATCGGGGTTAGTGATAGTGGATATCGTGCAGAAGATTTC
TTTAATCGTGTTAAATACCAGTGACCTTGGAGGTGGTTCTGATCCTTATCAACGCGTCTTACGGAGTCCTAAACGACAGG
ACGAGAAACGAGAAAACGAAGACAAAGCAAGAAGTCCAAGCACAGACCAGGTAAAATACACTTCTTTTTCTATTAGAATA
ACGTACATTTTGAGTTTCCCATTGTCTACCCCTTAA
PEP: 
>LH14196-PA
MKRTPFMLQTFRHGFPHQPTALAFDPVQRLLAIGTKSGSLRMYPLTLPLMRRHPVIKRLLFSETRKIYITQFENGARDCL
GRPGVDAHVKHEGCAAVIQLQFLINEGALVSATADDTLHLWNFRQKIPQVVQSLKFQRDRSRKTHPGAVVHLSDNPLDLS
KMLIGYATGQIVLWDLKTKNADYRCQTDDPLKSITWHHEGKQFMCSHTDGSLSTWTVRQLKPTNVTYPHAKSTKDGEPEP
CKPIQKVEWKLSRSGEAYVIFSGGLAYDTTGRTPSITVIHGKTTTVLEMEHNVIDFVTLCDSPWASDFQDPYAVVVLLQN
DLVVIDLLTSGFPCFENPYPMDIHESPVTCCSYFADCPSDLVPAFYSVGSKSQKKTGFSEKEWPISGGEWSSSSSSYNEI
ILTGHADGSIKFWDASAGTLQVLYKLKTAKLFEKTRTRSIDSEEDPLAIQLIFLCPESRKLAIAGSGKHVVLFKFKKVES
MSEVVTLEICLSADPGREGDNSPDRESPATGNIVESKITEFNHPLKVKTGLQKRAAGFQATLICLTTAPSGEQPENITSL
SLNSSYGLLAYGNESGLVIVDIVQKISLIVLNTSDLGGGSDPYQRVLRSPKRQDEKRENEDKARSPSTDQVKYTSFSIRI
TYILSFPLSTP
Swiss-ProtSyntaxin-binding protein 5
KEGG     K08518     
SUPERFAMILYSSF50978  WD40 repeat-like superfamily     
Gene3DG3DSA:2.130.10.10     
PfamPF00400  WD40; WD domain, G-beta repeat     
SMARTSM00320     
PRINTSPR00962     
ProSitePatternsPS00678  WD_REPEATS_1; Trp-Asp (WD) repeats signature.     

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