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Gene detail [Fasta]

Species Linepithema humile
GeneLH24483
Positionscf7180001005077:2150133..2155408[GBrowse]
Ant Genomes Portalhttp://hymenopteragenome.org/cgi-bin/gb2/gbrowse/lhum_10/?name=LH24483
sequence mRNA:
>LH24483-RA
ATGCCTGGACCATCGACGCAAGACAGACCCCGTGCTCATCGGCTCACGGATATCGAGTCTCAAACTGCGAAGAACTTTGG
TGGCAATCGAATGGACGACTTCAGCACGCCCGTTACTTCTGGCAGCAATATGGGTAGTATCGCGCGCTTTCCAAAACTCG
ACGAATGTGCCCATTTTCACTACGAACACGTCGAGCTCGGTACTTTGGAGGTATCCATCAATGAAGGTTCCAATGACTCG
GAGAGCTACGCCGTTCGAATAACATCCGGAGATGCGTGCTGGACGCTACAGAGATCTTACGACAACTTCGTCATGTTTGA
TAAGCAACTGCATCGCTGTATATTTGACAGAAAATTTTCTTCTTTAACGAAGCTTCCAGAAATTCGGCCAAAAAATACCT
GTGATATACTGAAGGATTACTTGAGACGATTCTCGCAATTGAATCACGAAGGCCTAAACTGTGGACCAGTGTTGAACTGG
TTGCAGCTCGACAACAGAGGGAGAAGGATTCTGGTGCCGGAATCAGATTCCTGTCCTATAAACACTCCAGCCGTCGCCGC
GGCCTATGCAGTGAGACCGTACACTGCCCAAGCGCAAGATGAAATTTCCTTTCAGGTGGGCGACATGATATCCGTTATAG
ACATGCCTCCTGCGGGGGAGAGTACCTGGTGGCGTGGAAAGCATGGATTCGCAGTTGGATTTTTCCCAGCTGAATGCGTC
GCTGTAATCGGAGACAAAGTGCCACGTCATTTGACAGTTTCAACGACAGTCAGATCCAGATTGCCAGTGAAGCCCGTGCT
TCGTAAACACGGCAAACTAATCGCCTTCTTTAGATCTTTCATATTAAATCGGCCTTCTAGGAGAAGATTGAAGCAATCAG
GTATATTGCGAGAGCGCGTGTTTGGTTGCGACTTGGGAGAGCATCTACTAAATTCTGGCCAAGACGTACCCACCGTTCTC
ACGTGCTGCGCGGAATTCATAGAGAAACATGGTCTAGTCGACGGTATATATCGTCTAAGCGGTGTGACATCCAACATTCA
AAAACTGCGGAACGCGTTTGACGAAGATCGAGTGCCAGCGCTGCACTCCGACGAAAGTATTCTGCAAGACATTCACTCTG
TAGCGTCGCTATTAAAGATGTACTTCAGAGAGCTGCCGAATCCACTGTGCACGTACCAACTTTACTCCACCTTCGTCAAT
GCGGTTCAAGCTAGCAGCGACGCCGAAAGATTGAGGCGTATGAGAGACGCCGTTAGAAAGTTACCACCACCTCATTACAG
AACACTGGAATATCTAATGCGTCATCTGGTGAGGGTAGCCGCACGTGGCACGGAAACTGGCATGACACCGCGTAACGTGG
CCATCGTCTGGGCGCCGAATCTCTTGAGATGCAAGGAGCTGGAAGTGGGCGGCGTAGCCGCGCTCCAAGGCGTCGGAGTC
CAGGCGGTGGTGACGGAATTTCTAGTCTGTTATGCAGAACTGATATTCGGGGATGGTCCTGTCGGGAGGCCAAAATCTTT
GGCGATCACCACGTCTACGCGACTGCTCACTCTGGAAGAGGCGCGCAACAGAAGCTTCAGGGGCGAACCGGATTATATCG
AAGTAGGGGCAGGTCCTGCCGGTTTACCGCTGCGCTATCACACGGTCATAGAACTGCCGCGCAAGAGAAATGGCTCGAAA
CGATCGCCCTCGTTGAATTGGAGGGCGTTATTCGGCAGAGGGGCCGTGGGAAAAGCGAGACAGATCGGTACACCGCCCCA
GGCGGAAACAGTGTCAAGTTCCTTAAACTCTCTGCGACGGCTGAGACCGGTGAAAAGCGCCGACAGCTTGGACGGCGAAG
ATAGCCTGGGCCCGCTCTTGGGCGGACCACCTCCCGCCAGAACATGCGGTCACAGCCGATCCGTTTCGCACGATTCATAT
TTCGATCATTTGGCCGACGCGCCCAATGCCTCTTCGCCGTTGGATCTCTCGGAAATACAGCTCAATTTCGATTTGGAAGA
ACGAGAGATGAGGATGCTTTCAGAAGAGGAAAGCGGCGGCGGAGTGGCGTCGATAGAGGCGTCGCCGCGTCGGCAAAGGG
CCGAGGGGAGTCAGTGTATCACTGCTAGTGGCGGATCCAAGAGGAAACGATCTCGTTTAGAAGAAAGACTGCAGTGCGAT
GTCGAGCTGCGCTTCATAGATAGCCAAAGTCCTGATCAGATTATGGTAACGACAAGTGCGGATATTCACAACATCGAGAC
GCCATCTCCGTTGCCAACGCCAGGCTACTTGCCGCTGTTGTCGGAGGCTTCCACACCGCTAACGCCGCCTACGTTGCAGG
GCACGTCCCATTCCACGTCGCCGATACCAGCTAATAGTCCCCGAATAAGTTTCCGAAGTTTCACCTTGCCGTTGGAGATC
GGCGATGAGAACAGCAAATTGAAGGAAACCAGCGGATTGTCTTCTGAAAAATTGTCCGATCGCAGCCATAGATTATCTAT
AAACTTAGAGGACCGGTCGAGGGGATTAGAATCGTGTGAAAGAACTTACGACGGCGGACGCGCACAATTGCATGACAGAA
GTGTAACCGCGTCACTTTCGGACGCTGAAAATCAGGTCACAACTCAGTCGAGTGCAGTCGCTTCGATTTTCAACGACACG
GAGATGACGTCGTCCAACAGAACGTTATCGTCTTTGTGCGTGGAAACCGAATCTGGCGGTATTCATATATCTCGCAAGGA
CACGACGGACGAATCGACTTCGCATTCCATAGAAATCTCGTCCAAGTCTTACGATGAGAAAGAAGTCGCGGACGATATGG
CTAAAGAATGCGACGAGTCTGCCGATCCACCGAGTAAGCTTGCCGCTACAGTCGATTTGCTGAGACTGCCATCGTCCACC
ACGACCGATCTCGATTCTCCAATGTCGTGCGAGCAAACTCTGCAAGAGTTACAGGAATCCGGATTTGTAATCTGTGATAG
TTCCGATAAAGTATTTGCCAATACGGAAAATCCGCGCGCGACGAGCAGCGCCAACGATTCCGGCGACTGGGTGATCATCG
GCGGCACGGCGACCGGTTCTCTCACAACACCGATGAGCGACGCGGTTAGTCCCAACGATTCCTTTCTGGAAAGTGGCGCA
AATCCAACGACGTCAGGAAACGTCTCTGGGAAATCATTAGAGCTCACATTAGCTTCAAACAATACGAATACATTTTGCAT
CGAAGTCGGCGACGCGAAATCATTGACGGGGAATCGTATATCGACGCAGGAGAGCGAAGAGATGATGCTCGATGTTATTG
ACACGAAGAAGTATGCGAATCGCGAAGACGAACGGCAAGTAGCCGATTCGCAAGCCAGTTTCGATCTCATGAATAAAGAT
AATCTCGTGGACGACGCCCATGCGCAACTGCGCGATCAAGAGAACGGCAATCGATACTCGTGCACGACGACTAATGTTAA
TTCGAGTCAAGAGACCAACGTGAGAGAGCACGCGCAGCAGGTTCACGCGTGTTACATCGAGGCGGACAACGCGAATATAT
TTGGTACAAATCGGAACGAAGTGCGCGAGGAAAAGGAGATATTTAGAGAAACGGAAATTTTCGAGAATTATCACCGTCTG
TCGAGGGGCACGTCTCCGAGATTCTCCGGTAGATCCGAAGAGAAGCAGGAAACGAGCGTCTCCGTAACGCTGGACGATCA
CGACAACGATCATTGTTCGAACGGACTGACAAAAAAGTGCCAAAGTTTCGGATACAATAATTCGCAGAGACAGCAGACTA
ATACGCAACAAATACGTAAATGCGCTTCCAAACGTAATGAGGAGAGTCCCAAGTACGCCAACCTCCAAGCTAATCAAATA
CGAGGTAACATCGAGGTAAGAATCCCGTCGGAGAATGCGGCTGAACCGTGCGAGGTAGCGCACGCGCCGGAAGGAACATC
GGAACTAATGGAACGGGCGTTAGACACGTCGGGCACATTTTCCAACGTCTCGTCTCCCAGAGTCGACGACGCGGTGGTTT
TACGCGACACCGCAGCCATCCTGCAGGAACTAGCTTTACAACGATTGTCCGGAGGCGCTGTGGGCAGCGACGTGTCTGTG
TCCACAAGAAGAAAGTACGAAAACGAAACGGCAAGGGATAGAAAGAGTTTTGATTCGGAAATCGGCAGAGAGATCGTTCG
AGAAAGGAAGATGAGACAAGAATTAGATTATGCGAGGGGTAAATCCGAGGAGTCGCAACATTTACCGCCTTGTTTACGGG
CGCGTCACGCGAGAGCGACTCGCGCGACGCTGAGTCGATCCCTAGACGAAGCCAAGTTTAACCGGATGACGGGGGAAATG
CCATTGTCGGTGAAACAAGCGTCCGGTAGATCCGAAGATGCGCAGCATTGCTCTACGCCTAACGTCGGCAGCGGCTCCAG
CACCTGCTCGAGCGCTTCCGAAAAGATTCAATTGAAGAATCTCGGTGGCCTAGATTTGGGAGACCCGCTGTGTCGAGAGA
GAATCGAAAAGTACAAAGAAGAAAGAAGAACGTTCCTGAGGGACAAATATCGATCGGAGAGCTTTCGCGGAGTTTCACCG
AAAACGGAAGACGACGGTGAACAGGCGTTATTAACCAGGTTGAAAGCAAGAGCTTCGAGACCTTCTCTTCATTGA
PEP:
>LH24483-PA
MPGPSTQDRPRAHRLTDIESQTAKNFGGNRMDDFSTPVTSGSNMGSIARFPKLDECAHFHYEHVELGTLEVSINEGSNDS
ESYAVRITSGDACWTLQRSYDNFVMFDKQLHRCIFDRKFSSLTKLPEIRPKNTCDILKDYLRRFSQLNHEGLNCGPVLNW
LQLDNRGRRILVPESDSCPINTPAVAAAYAVRPYTAQAQDEISFQVGDMISVIDMPPAGESTWWRGKHGFAVGFFPAECV
AVIGDKVPRHLTVSTTVRSRLPVKPVLRKHGKLIAFFRSFILNRPSRRRLKQSGILRERVFGCDLGEHLLNSGQDVPTVL
TCCAEFIEKHGLVDGIYRLSGVTSNIQKLRNAFDEDRVPALHSDESILQDIHSVASLLKMYFRELPNPLCTYQLYSTFVN
AVQASSDAERLRRMRDAVRKLPPPHYRTLEYLMRHLVRVAARGTETGMTPRNVAIVWAPNLLRCKELEVGGVAALQGVGV
QAVVTEFLVCYAELIFGDGPVGRPKSLAITTSTRLLTLEEARNRSFRGEPDYIEVGAGPAGLPLRYHTVIELPRKRNGSK
RSPSLNWRALFGRGAVGKARQIGTPPQAETVSSSLNSLRRLRPVKSADSLDGEDSLGPLLGGPPPARTCGHSRSVSHDSY
FDHLADAPNASSPLDLSEIQLNFDLEEREMRMLSEEESGGGVASIEASPRRQRAEGSQCITASGGSKRKRSRLEERLQCD
VELRFIDSQSPDQIMVTTSADIHNIETPSPLPTPGYLPLLSEASTPLTPPTLQGTSHSTSPIPANSPRISFRSFTLPLEI
GDENSKLKETSGLSSEKLSDRSHRLSINLEDRSRGLESCERTYDGGRAQLHDRSVTASLSDAENQVTTQSSAVASIFNDT
EMTSSNRTLSSLCVETESGGIHISRKDTTDESTSHSIEISSKSYDEKEVADDMAKECDESADPPSKLAATVDLLRLPSST
TTDLDSPMSCEQTLQELQESGFVICDSSDKVFANTENPRATSSANDSGDWVIIGGTATGSLTTPMSDAVSPNDSFLESGA
NPTTSGNVSGKSLELTLASNNTNTFCIEVGDAKSLTGNRISTQESEEMMLDVIDTKKYANREDERQVADSQASFDLMNKD
NLVDDAHAQLRDQENGNRYSCTTTNVNSSQETNVREHAQQVHACYIEADNANIFGTNRNEVREEKEIFRETEIFENYHRL
SRGTSPRFSGRSEEKQETSVSVTLDDHDNDHCSNGLTKKCQSFGYNNSQRQQTNTQQIRKCASKRNEESPKYANLQANQI
RGNIEVRIPSENAAEPCEVAHAPEGTSELMERALDTSGTFSNVSSPRVDDAVVLRDTAAILQELALQRLSGGAVGSDVSV
STRRKYENETARDRKSFDSEIGREIVRERKMRQELDYARGKSEESQHLPPCLRARHARATRATLSRSLDEAKFNRMTGEM
PLSVKQASGRSEDAQHCSTPNVGSGSSTCSSASEKIQLKNLGGLDLGDPLCRERIEKYKEERRTFLRDKYRSESFRGVSP
KTEDDGEQALLTRLKARASRPSLH
Swiss-ProtGTPase-activating protein CdGAPr
SUPERFAMILYSSF48350  GTPase activation domain, GAP superfamily     
Gene3DG3DSA:2.30.30.40     
PfamPF00620  RhoGAP; RhoGAP domain     
SMARTSM00326     
ProSiteProfilesPS50238  RHOGAP; Rho GTPase-activating proteins domain profile.     
CoilsCoil

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