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Gene detail [Fasta]

Species Linepithema humile
GeneLH24495
Positionscf7180001005077:2222871..2241240[GBrowse]
Ant Genomes Portalhttp://hymenopteragenome.org/cgi-bin/gb2/gbrowse/lhum_10/?name=LH24495
sequence mRNA:
>LH24495-RA
ATGCCTGCAGATTCCTATTACCAGCTGGTTGCGGCCGTGCCGCCATCGTGCCAGTTATGGCTCTGCACAATGAGCGACGC
GCAGTTCTCCGCTCCGATTTTTCCGCCTCTGGAGCGCGCTCGCATTTTAATTGTTATTCCGAACTACGACTCGAACTACG
TAGTAGAACTACGACTTACGAAGGAAGGTGAAAAATCTGAATATTTGACCGAAAATCCTGAAAACCACGTCGAGCGATCG
GAAATAATGCTTTCGTTCAGCAAATATTATGAAAAATCTAAAATAGATGAAGCTCTCAAGCGCAACTGCGATCCCAGGGT
AGGGCATTCATCCCCCCCGCTGTCGGCGCCGGATTCGGGCTCTAGTCCGGGCGGTTCGGTGTCCTCCAGATCAGTTCAAA
AGGAGAACTCCCCGCCTCGTGGTCCCCGCACGCTTTTGCTCAGGCGCAGCGAGAATGGCTACGGATTCACATTGCGGCAC
TTCATCGTCTATCCGCCCGAGTCCTGCTGCATGCTGCCGGGACACGAGCGGACCAAGATCGACGAGCCTATGGACACGAT
TTTCGTGAAACAAGTGCGGGCGAACTCGCCGGCGGCCGAGGCGGGATTGCGCACCGGCGACCGCGTGGTCTCCGTCGATG
GAATGCCCACTCGGGGCGAGCAGTACGCCAGTGTGGTGCAACGCATTCAACAAGCGGGCCCGTGGCTGCGTCTCCTCGTC
GTCTCCAAGGAAGACGACATTTTGCAGAGGTACTTCGGCGAGACGGCGCACAATCCCGAGACGAATCAACGCCCGCGGCT
GTGTTCCCCGGAGAGGCTGTCGCAGAAGCAGCGCAGGTCCATCAGCATGATGCCAGGCTCGTCGCCGAGAACGCGGCAGT
CCTGGGTCTATTCTTTATCGTCATCCGAGAGTTCGAATCATCACGAGGAGGCGATCAGCAGGAGTCAGCAGGCTGCGTGC
GCGGACGGTAGAATGCCGCCGACGATGTCTCAAATTCCACCGATCGCGGAAACTCAGATCACGAGTGCGTTGCAACAGCA
GCAGCAGCAACGAAGAGACGCGCAGTCGGAAGCAGGCGCGCTACACGATCCCTCGGAGGACGCCAGAGCTGCGGGGAGAA
AGCTGCACCTGGTGCGCGAGGATGCGCTGAAATCGAACAGCCGCTCGTCTCAGGACTCCAAGTACGATCTGTACGACAGA
ACGCGACCCGAGTCGGTGTACTCGCGACCGAGCAACGAGCAGCTCTACGACAGAATTAACGATCCGATTTACGAGCGTGT
GCGTGTCAGCGAGCACCACCCGCAGCATTATTACCAACCGTCTTTGCTGCGTTATCCGATGTCGCAGGCGGAGCCGCAGG
TGCCGATCTACCGGCCGGCCAAGCGGATGGTGTCGCGACGCGCCAGCGAGGGCAGCGGGACCGCCAACGACTCGGAGACG
AGCTACGGCAGCATCGACGCGCTGAGATCGAGCGAATCGAGCAGGCTGAGCATCGAGTCGAGACGAGACTCGTCGCCCGC
CGCCAGCAAGGACAGCACGTCGCCGTACGACTCCACGTCGACCCTCACCGGTAACGAGTGCTCCGACGATTCCGTCATCA
TGAACAGACTCCGCAAGAGCTTCGAACAGAAAGCGGAGTTCTTGCGGCGGCCCAGCCACCCCATTGGCTGGTCCTTCGAG
TCGACGTCGCCGCCGCCGCCGCCTTTGCTGAGCAACTTCCAAGCCGCGGTGATTCAGAGGGAATTCTACGCGAGGCCGCA
GAAGCTGCAGAGATCGATCTGGCCACCCGGACAGTGCGAGCAGCAAAGGCAGCAATCCCCCACGAGAAGATCTCAGGAAA
GAAATGTTGTTGCCGCCAAGCCGAACAAGCCGTCGAATCAGAACGTGCAGAGGATAAAAGAGGTGGACTCCAACTCCGAG
TACTCCAAGCCGCGAAACGATCAACAGCTCGAAGACAATCAATCTATCATCGCCGAGCACTGTTACTCGTCACTTCCCTA
CGACAACGAGCTGGCAAAAGAGCAGCAGTACAAGAGCGCGAACAAGAGTAACCTCGTCAGTATTTTGTCGAGGATACACG
AGAATATTAGCGCGAATCAGCAGCAGACGTTGCAACAAGACGAGAGAAACGGTTCTTCGTCGCTGCCGTCATCGCCGGGA
CCGGACAAGAAGGGGGGTGACACGAAGTTTCCGGTGCCGCCGCAGGGTCTGCAGATCGTTTCGAGGCGCGCCAAACAGTT
CGAGTCCGGTCGTCTGATGAGCGACGGCGACGAGCCCGCCGGTGATCGGACAAATCTTTACAAAAGCGAGTTGTCCAGAT
TGTCGAACAAGAGAAGTGTGCCGAATGTGGCTGTGCGGAAACGGGAGTTCGAATCGAAAGCCGAGAGTCAAGAACAGAGG
AGGCTGCCGAACAGAGAAACCAAATCTCTCGACACTGAGGTGCCCATTATGGAGACGGAATCGGTGCGTTTGAGAGCACG
CAGCAACAGCGCGGAATCCTGGGAAGCTACAAACGGCCCGGCGGCACGAAGCGGCTGTGCCAGGCATACGTGGCAGATCG
CCGAGGAAGAAAGTATTGAGGACGATAATAAAGCCTCCCGCAAGCAGGTGACAGTCAATGGTTCTTCGTCCAACGGCTCG
ACGACCAATAACGCCATCGTACTCAGGCGACAGAAGAATGCACAGATCAGTGACGAAGATCGCGCTACCAGACGAGTTTC
GTATCTGAAGGCTACGTGGGGCGAACGTATGCACGTCGACAGCGATCTAGAGCTCAGCGATTCGGAGCCCGTTCACATTC
ACAGAAGTAATAGTATCTCTATTACACACGATAGCAATGATGGAACTGCGAAGGATCTCGAACCGGAGCGAGAGGGTACC
CTACATGTCAAATTCACAGTGCTCGATGGCAAGCGATCTACCGATCGTTCCTGGAAGCAAGTCTGGGGTGTCCTCCGTGG
TCCTATAATTTACTTCTACAAGGATCGTCATAGTCAGAGTCCTTCGCTCAGCACCGAGAACGAGACAAATATCGGGCACA
GCATCGACGTTAGATGTTCCGTGGTCGATGTCGCCGGGGATTACACTAAACGGAAACATGTGTTACGAGTGGCGAATCCT
ACAGCGGAAGTGCTTTTGCAAACCGAGGACGCGGCATCTATGGCACTCTGGTTGAGATCACTTCATTCTCACGCCGCCGC
GGAGAAATCATCGGACGCCGTATCTTGCACGTCAAAGCAACAGGCCGTTCCGCAAACTCCGACGGGTTCCACGAGCCCAA
ATAGCAGCGTTCCTTCGAGCAACAGTCAAAGACTGAGCCCTCTGCCGAGTCACAAGGGCATCAAGAAGTTAACGTCGTTC
AGAAACCGCTCGCCGACCGGTCAGTCGCCAGTGAATAAGACACGCAAGCCGAGCAATCAGGTGATGGAGTCCTTATCGTC
GCCCAAGTCGAAAACTTGGAAGGGAAGGGTGGCGAAGCAGTTCAGGAGGATGCACGGTCAAGCTGGCGGCGCGCCTTCCT
CGCCCACGGCACAGCTGCCGCCCGAAGGAGCCACTTTCAAGATGCCTCTCGAACTTTGTCCGCCGTCTTCGTTCTCCGAA
TGCGTGCCGCTAATCGTCGAGATGTGCACGAGCATCGTTGAAGCGAGAGGCCTCGAGGTTGTGGGAATCTACAGAGTACC
CGGAAACACCGCCGCGATCGCTCAGCTCACCGACAGCGTCAACAGAGGATTCGAAAACATCAATCTTCAGGATCCAAGAT
GGAGTGACGTTAACGTGATATCGTCGTTGTTGAAATCGTTTTTCCGTCAACTTCCCGATTCCTTGCTCACGGCGGAACTG
TATCCCATGTTCATCGACGCCGATAAGATAGAAGATCCGCAACGGAGAATGACGACGATACGAAAATTATTGCGAGATCT
TCCGGAACATCATTTCGAGACGCTCAAGTATTTAATGCAGCATTTGAAGAAAATAGTGGAGCACAGCGAGATCAACAAGA
TGGAGGCCAAGAATTTAGCCATCGTTTTCGGACCAACGCTGGTGCGAGCGAGCGGATCAAGAGACAATATGGTCACCATG
GTCACCGATATGTCGCATCAATGTAGAATAGTCGAGAGTCTGCTGAACAACGTCGATTGGTTCTTCTCGGAGGACGATTT
GGACGACTTGAGCAGACTCAGCGTAAATTTAAACTTGCCAGTTGACAGCTGCGAAGTTGAACCACCTAATACCAATCACA
GCCTTTTGTTGAACAATATTCAGAAAATCGAAGGTATGCGCGACATGGCGTCGGCCAGGGACATTGTATCCTCAATCATA
TCCGCAGCGAACAAGAAAATTCAGAGAAGACGAAAGACTCAGGACGAAATCGATAACGGCGAACACGACAATGGCAAGGA
CAAATCGAAGCAAGAATCGGAGAATTTGCCAATAATTAGGCAGAGCATGGCCTTGAATGAGCGACAGTGTTCCGTCAGCG
AAATTGTGCAGATGCACGAAAGCAAAAATCAATCAAATCAGTCTGCGGATCGTTCCGAGCGATCTCTGTCAATTGATGCC
AATAACGGCAGTTCGTCGAATCGAGCGTCCCCGTCGTATCGTTTCAAGTATTTGAATCAGTCCGCGCCCTCGTCCATCGA
TTCTCCGAGACTGTCGAGCGAAACTGGTTCGAGTCTGACAGAAACGATCCCTACCGAATCCAGCTCTTCGTCCAACGAGA
CGAAGCAAAGCAACGACGAGATAACGATTTTGACCTACGCTGGTTTGAGCGCGACCACGCAGGAGCGAGTGCGAAAGTTC
GAGGAAGAAACAAAAGCGATGCTGCAAAGAGATCAACATCGGCAGCGACTCGAAGCCGAGAAGAGGGAAGAGGAGAGACG
AAGAATCGAAATAGAGTGGCAGTTGGCGAAACGAGAGATGGAAAACGACGATCTTCTCGACAGTATCGTCGACACCACGG
TGTCGCCGAGCCTCTTGTCGGAACGTCTGTCTGGTCTGAACGAAAGATTCGGTGATAAATCACTGATCGATCTGTCGGAG
AGGCACGGGAGATCGCGATCGACCACGAGACCGCCGCTGTCGATAGCCGTGCAGCAGCAGCCCACGATGTACCATAAAGC
GCAAGCCACCAATCAGTTGACTAACGTATTGGGAGAGAAGATGAATAACGGCGTCATTAAGAAATTCAAGACGGACAAAG
ATCCATCGATGGAATCGATCTGTTTGCCGCCAGTCCGTTACGGGAGTCTAGATTCCTTGCACGAGGTTCACAATCTGTCG
CAGTCCTCCCCGTCACCGTCGCAACAACAGCGCGGCGTCCCCGGCGACGTCTCGGATGATGCGAACGACGAGCCCGCCGC
TGTGCCAAACTCGGGGCTCACCGCCACCGCCAAGACTCTAAATCGATTTCTTCGAGGTAGCGACCTTCTAACCAGCCTTA
CGACTACGTTCGATCGCAAGTGGAGGTCTCTCATTAATCAGTCGTCGAATCAGGCGCAAACTCCTCTGGAATCTACATCC
TGCAACAGAGGCGATGCAGCAGCGGAGCAGCAGCGGCAGCAGCAGCAAAAGTCGAGCGCATCCCCGAAATTCAAGTATCC
CACGCCTACGGAAGCCTATCGCGATCCTAGTCTTCACAAGTCGCTCGAGAAGAACCATCTCTCCCGCACGAAAAACGATA
CCCCGGAAAAAGACACCGACTCAACGATAACCGATGACACGCCGCATCCTTTGAAGTCTGTCACGCCGAATAACGATAAG
CTAAAAGCGGAGACAAAGCCAAATCATACGACGGAGAGAGCGGTGGATTTTAGCGAGAAGGACAAGAACGGGAGAGATGC
GGACGAGAGGGAAGATTTTATACGCGTGGAAAATGCAAAATGTTACGAATTGACGAGCGAAAGGAATATTCAGGAAGACA
TATCGGAAAATAACGATGTCGACGGAAAATTTCAAGACAACGGCAAGAGCCATCATTACGAGACCGGAGATTCCAGTTAC
TCCAACAAGCTGAAAAAATTCGAGAGCTTGACGAATTCCGAGGCGAGATCCCGTCTAAAACGATCGGAATCTCTAAATAA
AAGAACACCCGAGAACACTACTTCGCGACTGAAGAGATCGGAGAGTTTAAATAAACATTCGACCGAAAGGCTCTCGCCGC
TCAAGCGATCTGAAAGCTTGAACAAGCACTCGGGCGACCGATCGGAGTCACCGGGCAGCAAACTGAAGCGCTCGGAGTCG
CTGACGAAAACCGAGAAAACCGAGTGCAACATCAGCAAGCGGCGGCAATCGGTGCGAAAGGAGAGCGCCACGAAATTGAA
GCGGAAGAACGGAATGTCGGAGCGATCGATTAAACGGAGACACACGGTCGGCGGTACCAAGGATTTCGACAAAGTGCACT
GGCTCGATAATAAACTGCAATCCGAGACTGAGAGGATCATCAGGAGCGATTACAGACCGAAGAAGAGCCAGCTCAGAACC
AGTTCGCCCGATCTCAGCACTAATCGGGTCAATATGGCCGACACGAGTTTCCTGATCGAAGTGAGCTTTCGCGGACCCAG
TAACGTCGTCTTCAACGTAACCAATGCCGCGCGGCCGCAATCGTTGCCGGACGCGAATCTCGCGTCGAAGGTGTTTAAGG
TACCCCTTGAAAGTCACGTATAA
PEP:
>LH24495-PA
MPADSYYQLVAAVPPSCQLWLCTMSDAQFSAPIFPPLERARILIVIPNYDSNYVVELRLTKEGEKSEYLTENPENHVERS
EIMLSFSKYYEKSKIDEALKRNCDPRVGHSSPPLSAPDSGSSPGGSVSSRSVQKENSPPRGPRTLLLRRSENGYGFTLRH
FIVYPPESCCMLPGHERTKIDEPMDTIFVKQVRANSPAAEAGLRTGDRVVSVDGMPTRGEQYASVVQRIQQAGPWLRLLV
VSKEDDILQRYFGETAHNPETNQRPRLCSPERLSQKQRRSISMMPGSSPRTRQSWVYSLSSSESSNHHEEAISRSQQAAC
ADGRMPPTMSQIPPIAETQITSALQQQQQQRRDAQSEAGALHDPSEDARAAGRKLHLVREDALKSNSRSSQDSKYDLYDR
TRPESVYSRPSNEQLYDRINDPIYERVRVSEHHPQHYYQPSLLRYPMSQAEPQVPIYRPAKRMVSRRASEGSGTANDSET
SYGSIDALRSSESSRLSIESRRDSSPAASKDSTSPYDSTSTLTGNECSDDSVIMNRLRKSFEQKAEFLRRPSHPIGWSFE
STSPPPPPLLSNFQAAVIQREFYARPQKLQRSIWPPGQCEQQRQQSPTRRSQERNVVAAKPNKPSNQNVQRIKEVDSNSE
YSKPRNDQQLEDNQSIIAEHCYSSLPYDNELAKEQQYKSANKSNLVSILSRIHENISANQQQTLQQDERNGSSSLPSSPG
PDKKGGDTKFPVPPQGLQIVSRRAKQFESGRLMSDGDEPAGDRTNLYKSELSRLSNKRSVPNVAVRKREFESKAESQEQR
RLPNRETKSLDTEVPIMETESVRLRARSNSAESWEATNGPAARSGCARHTWQIAEEESIEDDNKASRKQVTVNGSSSNGS
TTNNAIVLRRQKNAQISDEDRATRRVSYLKATWGERMHVDSDLELSDSEPVHIHRSNSISITHDSNDGTAKDLEPEREGT
LHVKFTVLDGKRSTDRSWKQVWGVLRGPIIYFYKDRHSQSPSLSTENETNIGHSIDVRCSVVDVAGDYTKRKHVLRVANP
TAEVLLQTEDAASMALWLRSLHSHAAAEKSSDAVSCTSKQQAVPQTPTGSTSPNSSVPSSNSQRLSPLPSHKGIKKLTSF
RNRSPTGQSPVNKTRKPSNQVMESLSSPKSKTWKGRVAKQFRRMHGQAGGAPSSPTAQLPPEGATFKMPLELCPPSSFSE
CVPLIVEMCTSIVEARGLEVVGIYRVPGNTAAIAQLTDSVNRGFENINLQDPRWSDVNVISSLLKSFFRQLPDSLLTAEL
YPMFIDADKIEDPQRRMTTIRKLLRDLPEHHFETLKYLMQHLKKIVEHSEINKMEAKNLAIVFGPTLVRASGSRDNMVTM
VTDMSHQCRIVESLLNNVDWFFSEDDLDDLSRLSVNLNLPVDSCEVEPPNTNHSLLLNNIQKIEGMRDMASARDIVSSII
SAANKKIQRRRKTQDEIDNGEHDNGKDKSKQESENLPIIRQSMALNERQCSVSEIVQMHESKNQSNQSADRSERSLSIDA
NNGSSSNRASPSYRFKYLNQSAPSSIDSPRLSSETGSSLTETIPTESSSSSNETKQSNDEITILTYAGLSATTQERVRKF
EEETKAMLQRDQHRQRLEAEKREEERRRIEIEWQLAKREMENDDLLDSIVDTTVSPSLLSERLSGLNERFGDKSLIDLSE
RHGRSRSTTRPPLSIAVQQQPTMYHKAQATNQLTNVLGEKMNNGVIKKFKTDKDPSMESICLPPVRYGSLDSLHEVHNLS
QSSPSPSQQQRGVPGDVSDDANDEPAAVPNSGLTATAKTLNRFLRGSDLLTSLTTTFDRKWRSLINQSSNQAQTPLESTS
CNRGDAAAEQQRQQQQKSSASPKFKYPTPTEAYRDPSLHKSLEKNHLSRTKNDTPEKDTDSTITDDTPHPLKSVTPNNDK
LKAETKPNHTTERAVDFSEKDKNGRDADEREDFIRVENAKCYELTSERNIQEDISENNDVDGKFQDNGKSHHYETGDSSY
SNKLKKFESLTNSEARSRLKRSESLNKRTPENTTSRLKRSESLNKHSTERLSPLKRSESLNKHSGDRSESPGSKLKRSES
LTKTEKTECNISKRRQSVRKESATKLKRKNGMSERSIKRRHTVGGTKDFDKVHWLDNKLQSETERIIRSDYRPKKSQLRT
SSPDLSTNRVNMADTSFLIEVSFRGPSNVVFNVTNAARPQSLPDANLASKVFKVPLESHV
Swiss-ProtRho GTPase-activating protein 21
SUPERFAMILYSSF50156  PDZ domain-like superfamily     
Gene3DG3DSA:1.10.555.10     
PfamPF15410  PH_9; Pleckstrin homology domain     
SMARTSM00228     
ProSiteProfilesPS50106  PDZ; PDZ domain profile.     
PRINTSPR00683     
CoilsCoil

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