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Gene detail [Fasta]

Species Linepithema humile
GeneLH19880
Positionscf7180001004973:1355420..1362083[GBrowse]
Ant Genomes Portalhttp://hymenopteragenome.org/cgi-bin/gb2/gbrowse/lhum_10/?name=LH19880
sequence mRNA: 
>LH19880-RA
ATGACAGCATTAGCAGAACTGGACGCAGGTTGCAACGAAATCACGAGCCTACCATCTCGAATAGGCGACCTTGCGCGACT
CCGGTCTCTGGATCTGAGGAGCAACTTGCTGGTGCACCTGCCTATAGAACTGACGTACCTGAGGCTCGTGAAGCTGGATA
TTAGTGGCAATCGAATATCTGTGCTTCCAAATGAGATGAGGAAGATGAAAGGCTTAGTGGATTTCAGACTGTCCGACAAT
CCGCTGACCTCGCCGCCTGCCTCGGCAGCGAAACACGAGAGGGCCAGAGGTGGTCGGACGAGGCGAACGCCTCTGGACAC
GAGGGGTCACGCGACGCTGGACTTGAGGTCGCACCGGCGGCACAACGTCGACAGCGGATACAGCACGAGCGACGGCGTCG
ACAAACGCTGGTCCCAGGAGATCCACAGCGCGGTGCACGACGGCGAAGTTCGCGGTTTGTGGCGGCAAGAATGTTCACCA
TTATCGATAACGCTACCGCACGAGGTAGGTGTGAACGGGTCTTGCAGCGGCACGTCGACACCCAGCACGATTTCACCCGG
GGAGCACACATCTTTAGAAGATGAGTTGGGCAAGGCTATGATACTACACGATCAACTGGAAAAAAGGAGATTAGAGAGGA
GCACCTCGGAGAATGGGGCAGACATTAGGAGACCTATGATCTCTGGCCTTCATCACACATCGATTACGCCACCGGGCCAT
CTGGAGTCCACGCATTTGACGAATCAGTCGCAGCAGTTATCGTGCGCACAATCGGTACACCCACTTCAGACTGCCATGAA
TCCCGCTACACTAATGAACGGCGACGATAAGAGGCCGTTGAATCACATACAGACGTACAGGGAGTATAAAGAAGCTTTGA
AACAGCAGAGAGCTAACGAAGGTCTAAGCGTGTACAGACCTCGCGAACAAGTGACGCCTCCGGGCAACGAGTCGCAAAAT
AACGAGACCGACTCGGGCAATAATAAGGAAATCATCACTCTGACTGGTAAACAAATTTTTAACGAGGACAACGCGTTGAA
GAGGCCAGTGCAGAAGGTTACCCCATCGCGAATCAACTATCAAAACACGCCGATTATCAACGGCAACAACAGCGACTACA
ACAACAAGAACGGAAAATATCTCGAGCAACCTTATAAGAAGCCTAGCTCGCCTATCAAAACTTCCACCAGTATTCTTTCC
ACGAACACAAGTCCAGCGCACGCACCCAGACTAGTGAAAACTGCTGTTGGTTACGTAGAAGGCAACAAGAGTCCAAGTAG
AAATGGCGGCAGTCCTAAATCACCGCGATCCGTCACTTGGAACAGCAACGTGCCTGAAAAGTATTCCTTTACCATGAGGA
GAGAGTTCGAACGTGCCAAAGAAGAGGCTGACCTCATCGAGCAACTGCGAAATCATATAGAGACGAGATTAAAAATGGCA
CTGCCGGAGGACCTTGCACCAGCGTTAACGGACGGCGTTGTTCTCTGTCACTTGGCTAACCACGTTAGACCGCGATCGGT
CGCCAGTATACATGTTCCTTCTCCGGCTGTACCTAAATTGACGATGGCGCGATGCAGACGTAACGTCGACAACTTTCTCG
AGGCGTGCCGAAAGATTGGCGTCGATGAGGAGGTGTTATTGGACGCGGATGCAATCATGGACGTGGGTTACATGGACGCG
TATGGGCTGGAGGCTCTGGCGCGTCTCGTCACCTCTCTTCTCCTTGTTCGCGATGAGGAGGAGAGTGACACCGAAGAGCC
GGTCGCTGGTTCACTCCGTACGATTCAGGACCACGTTATGTCCGCAATGCTTTTTGCCACATTCCTATCCACTCTGGTTC
TGCTTTATTTCTTTCCGATCCCCGATTAA
PEP: 
>LH19880-PA
MTALAELDAGCNEITSLPSRIGDLARLRSLDLRSNLLVHLPIELTYLRLVKLDISGNRISVLPNEMRKMKGLVDFRLSDN
PLTSPPASAAKHERARGGRTRRTPLDTRGHATLDLRSHRRHNVDSGYSTSDGVDKRWSQEIHSAVHDGEVRGLWRQECSP
LSITLPHEVGVNGSCSGTSTPSTISPGEHTSLEDELGKAMILHDQLEKRRLERSTSENGADIRRPMISGLHHTSITPPGH
LESTHLTNQSQQLSCAQSVHPLQTAMNPATLMNGDDKRPLNHIQTYREYKEALKQQRANEGLSVYRPREQVTPPGNESQN
NETDSGNNKEIITLTGKQIFNEDNALKRPVQKVTPSRINYQNTPIINGNNSDYNNKNGKYLEQPYKKPSSPIKTSTSILS
TNTSPAHAPRLVKTAVGYVEGNKSPSRNGGSPKSPRSVTWNSNVPEKYSFTMRREFERAKEEADLIEQLRNHIETRLKMA
LPEDLAPALTDGVVLCHLANHVRPRSVASIHVPSPAVPKLTMARCRRNVDNFLEACRKIGVDEEVLLDADAIMDVGYMDA
YGLEALARLVTSLLLVRDEEESDTEEPVAGSLRTIQDHVMSAMLFATFLSTLVLLYFFPIPD
Swiss-ProtLeucine-rich repeat and calponin homology domain-containing protein 1 (Fragment)
SUPERFAMILYSSF52058  L domain-like superfamily     
Gene3DG3DSA:3.80.10.10     
PfamPF00560  LRR_1; Leucine Rich Repeat     
SMARTSM00033     
ProSiteProfilesPS50021  CH; Calponin homology domain profile.     
CoilsCoil

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