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Gene detail [Fasta]

Species Linepithema humile
GeneLH20434
Positionscf7180001004986:23006..25784[GBrowse]
Ant Genomes Portalhttp://hymenopteragenome.org/cgi-bin/gb2/gbrowse/lhum_10/?name=LH20434
sequence mRNA: 
>LH20434-RA
ATGGAACAACCAAAAGCGGTAACAAACGATGTCAACGGAGAGTCGAGAGACGAGAATTCGTCAAATCAGAATCATGCCAA
CACGACTAATCCAGCTTTGGCAAACATGAAAGAAAAAACACCTATGTGTTTATTGAACGAGTTGGCGAGATTCAATAGAA
TTCAGCATCAATATAGACTGACCAACGAACAGGGACCGGCGCACAAAAAGAGATTCACGGTGACGCTGAAACTCGGCGAA
GAGGAATACGTCGCGGAAGGTCCCAGCATAAAGAAGGCACAACATAGCGCAGCGACCGAAGCGTTAACAAAGACTTGGTA
CCGTCAGCCTCCGCCTAAACCGACTAAGGCTATGAGAATCGGGCATCTGGGCAAATGTCCAACGGGTTCTGGACATTTAC
CACCCACCGTCGAATTGAACGCACTAGCGATGAAACGAGGCGAACCGACTGTTTATTCATTTCGACAAGCTCCACCGGCC
GCATTGCAGCATCAATTTATGCCGCACGGTTTTGGTAACTTTCCGCGCATGTACAATCCACGACTCACGTATAATCGCGG
GGTTCACACGGATCTTCAAGGACTGTATCTCGTCACTTTGAGGGTCGGCGAACGTGAGTTCACGGGTAGAGGCTTGACCG
GGCAGGCGGCACGCCATGATGCGGCCAGTAGAGCTTTGGAGCAACTGCGTCAGTTGCCGCTTCCGGAAGAGGTCACGAGT
GTCAATAATGCTACCGAGAACGGTGCGCTGAGCGGTATCGACGATCCGAACGCCGAGTTGAAGAGTCCGGTGTCTCTGGT
TCACGAGACTGCTCTGAAGCGCGGATTGCCGGTCAGCTTTGAAGTGATATCCGAGAGCGGTAAACCTCATATAAGAACCT
TCATGACGAGATGCACCGTCGGCGACAAGGTCACTATGGGAGAAGGATCTTCGAAAAAAGTGTCGAAGAAACGAGCTGCC
GAGTTAATGTTAGAAGAACTGAAGCGTCTTCCTCCATTACCTGCCACCATACAGAATCGATCGATGCGGGTGAAGCGTAA
ACCACCGGCGACGAAGAAGAAATCCCGTAATTTAATCAAAGTTTATCAGGAGCCTCGTTCGGAAAGCGAAGCGTCGGAGG
AAGTCAATCCGGTTTCTCGATTAGTTCAAATTCAGCAGGCCAAACGGGAGAGAGAGCCGATTTACAATCTGATAGACGAG
AAGGGCGCGCCGAGACGCAGAGAATTCGTTATGGAGGTGACGATGGGCCAGCACTCCGCGCAAGGAATCGGACCTAACAA
GAAATTGGCGAAAAGAGCCGCGGCCGAGGCTCTTTTGGCGCATTTAGGATACAGCAAGCCGTCGCCGCAACCCGCTAAAC
CGTCCATAAAGACGGGCGAGAGCGAGAACACGGAATCAAAACCCAGAAAAGTAACGTTTCTCGAGGACGAACAAGTGAAC
GACACTCAATCTCATTCGGTAGGAGGCACCATAGGTCGCCAGTTGGTACCTGGCCTCTTGCTGGTTGACGGAGGTCAAGA
ATCTAAACTGGGAAACGGACCCAGCGTACAAATAGTCGCTGAAGAGTTGCGCGGACAACAACAGAATACAGCCGGTGTTT
CGCCCAGGGATCAATTGCACTATTTATCTCAGTTATTTCATTTCAGCGTAGAGTTCAGCGATTTCCCCAAGGGGGTGTCT
ATGAACAAGGAATATCTATCACTCGTGTCGCTAAGCACAGATCCACCGCAAGTTTGTCACGGTAATGGAGCGACAATAGC
TCAGAGCCGCGATCAGGCGGCGTTAAGGGCGCTTCGTACTCTCAGTAAATTAGGACTCGACAATGCCTCGAATGCTGCGC
AAGTGAAGAAAGACAAAGGTGCGTCAGGTGATGGAATCCACATTAGCATTCAGGTTAAAAATAACATTATGGACGGAGCT
ATTGATAAGTAACTGAATAGCACTTAAGACTCTTATTACATATATGATGTTGAGTTATATTAATGTTTCTTTAAGACACT
GCGGAAGAAGGTTGATTAAGCTTTCTCATAAATCGTTTCTTTACAAGAATGGATGAAAAATTGATTACAATTGTCATTTC
CATATATTGACAAATATATTAATGTTTTATATAAATTTTTATACATCTTGTCAAATTCTAATTTTTTTATATTTAATTTT
TATCTATGCTGCTATACATAATAATTTGGCTGTATTTGTAATTGTAAAAATTTGCA
PEP: 
>LH20434-PA
MEQPKAVTNDVNGESRDENSSNQNHANTTNPALANMKEKTPMCLLNELARFNRIQHQYRLTNEQGPAHKKRFTVTLKLGE
EEYVAEGPSIKKAQHSAATEALTKTWYRQPPPKPTKAMRIGHLGKCPTGSGHLPPTVELNALAMKRGEPTVYSFRQAPPA
ALQHQFMPHGFGNFPRMYNPRLTYNRGVHTDLQGLYLVTLRVGEREFTGRGLTGQAARHDAASRALEQLRQLPLPEEVTS
VNNATENGALSGIDDPNAELKSPVSLVHETALKRGLPVSFEVISESGKPHIRTFMTRCTVGDKVTMGEGSSKKVSKKRAA
ELMLEELKRLPPLPATIQNRSMRVKRKPPATKKKSRNLIKVYQEPRSESEASEEVNPVSRLVQIQQAKREREPIYNLIDE
KGAPRRREFVMEVTMGQHSAQGIGPNKKLAKRAAAEALLAHLGYSKPSPQPAKPSIKTGESENTESKPRKVTFLEDEQVN
DTQSHSVGGTIGRQLVPGLLLVDGGQESKLGNGPSVQIVAEELRGQQQNTAGVSPRDQLHYLSQLFHFSVEFSDFPKGVS
MNKEYLSLVSLSTDPPQVCHGNGATIAQSRDQAALRALRTLSKLGLDNASNAAQVKKDKGASGDGIHISIQVKNNIMDGA
IDK
Swiss-ProtDouble-stranded RNA-binding protein Staufen homolog 2
KEGG     K17597     
SUPERFAMILYSSF54768  dsRNA-binding domain-like superfamily     
Gene3DG3DSA:3.30.160.20     
PfamPF00035  dsrm; Double-stranded RNA binding motif     
SMARTSM00358     
ProSiteProfilesPS50137  DS_RBD; Double stranded RNA-binding domain (dsRBD) profile.     
OrthologiGroup-00514    Maternal effect protein staufen      

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