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Gene detail [Fasta]

Species Linepithema humile
GeneLH23916
Positionscf7180001005069:17354..36030[GBrowse]
Ant Genomes Portalhttp://hymenopteragenome.org/cgi-bin/gb2/gbrowse/lhum_10/?name=LH23916
sequence mRNA: 
>LH23916-RA
GATAATAATCGTGTTGCAGGCACCAATGGCGCCGGATGTGGTTATCCAGGCGCACCGGCGCACAGCAGCGTTCGTTTCAC
CGGCACAGACATCGATGACGTGATAGACGAGGAGGATGCCCTGCTTAAGGACACCGCGTTACCGGAGGGCACTGTAGCCA
CGTATTCCTGCGAACGAGGATTCGAGCTGCTCGGACCGACGAGAAGGGAATGCCAGGCCGACGGCACGTGGACGCCGGAA
GGCGTGCCCTTCTGCGAAAATATGGGATTTAAAATTAGTGTTTCCATTGGATGTCCATGTCGACAGGCCGAACCAGTTCA
GAATCACGAATCGAATGGTTCAGGATTCGGTATTTTAGTAGAGCAGGATCCTGCGCATTCCTGCGTTCTGAACGTGGCCG
GCGGCAAAGCACCGATGCAGTCCAGCAGTATGGACGGCGGAATTCCGCAACGCGCCGTCGACGGAAGCAGCGGCCAGATT
TACACGCCGCAAACCTGCACCTTGACGAGGCTCGAGCACAAGCCGTGGTGGTACGTAAACCTGCTGGAGCCGTACATGGT
GCAGCTGGTGCGTCTGGACTTCGGCAAACCGTGTTGCGTTAATGGCAGCTCCGGCACCATCGTCGTTCGCGTTGGTAACA
ATCGGCCGGACTTGGGAATGAATCCCATTTGCAATCGGTTCTCCGGAACTCTGGAGGAAGGGCAGTCCCTCTTCCTGCCT
TGCAACCCGCCGATGCCGGGAGCTTTCGTCTCGGTGCACCTCGAGGCGACAGTATCCGCCGATATTCCCGTGCAGCTGTC
CTTGTGCGAGGCGTTCGTCTATACCGATCAAGCTCTGCCGATCGAGAGGTGTCCTCAATTTCGGGATCAGCCGCCAGGAT
CTACGGCGACCTACAACGGCAAGTGCTACATATTTTACAATCACCAGCCGTTGATGTTTGGCGAGGCTCTGAACTTCTGC
CGCAAGCGAGACGGCACGCTCGTGGACGAAAGTAATCCCGCTCTGCAGGGATTCGTTTCGTGGGAGCTGTGGAGGCGGCA
TAGGAGCGACACATCCAGTCAGTATTGGATGGGCGCGGTTAGGGATGAGAAAGATCCGACGTTGTGGAGGTGGACCGGAA
GTGGTGAGGAGGTGTCCGTCTCGTTCTGGAGCACGCCGCAAGGCATCGAAAACAATTGCGCTCGGTACGACGGCAACAAA
GGCTGGCTTTGGTCGGCTACACCTTGCGTAGCCCGGCTTAATTTCATCTGTCAGCATCAACCACGGGCCTGCGGCAGACC
CGAGCAGCCGCCGAATTCCACGATGATAGTGTCCACTGGCCCGTCCACCAGGATTTCCAGTGGCGTGTACGAAGTCGGAG
CGGCGGTGGAGTACAGTTGTAACGCGGGCAGCCTTCTGATCGGGCCGGCGACTCGCACTTGCCTCGACACCGGTTTCTAC
AACGAGTTTCCGCCGGTGTGCAAAAGTAAGCGATCGTCGAAGAAAACCGCACTGAAATTATCACGGACGCGACTCACAGC
ACAATGCGCTCTGATCGTTTTAGGTATTGAGTGCGGCTATCCCGCGAGCATAGAACACGGTGGCTACACGCTCATCAATA
ACACCGTCAGTTACCTCAGCCAAGTGCTTTACTCCTGCGAAGAGGGATACGAGATGACCGGTCGCGCCCGGTTGACCTGC
GACATCGACGAACGTTGGAACGGTCCGCCGCCGCGATGCGAGCCGGTTCGCTGCGATCCACCGGCCACGGTCGCGCACAG
TTCCATCCGAATAGACGATGGCAACAAAGGCAAAAATGTTCCGGCACGGAATAACTTCAATCAAAGTCTGCTGGTCGGCA
GTATCGTCACTTACACGTGCGACAAAGGCTATCAGCTCGATGGTGTCCGGCAAATACTCTGTTTAGCTACTGGATTGTAC
GATCACGTCCCACCCACTTGCACAGTGCGTCCATCGACTCAGAAAATTCGGCCGTACCTCACCCCGAGAATCAGGACCAC
AACGAGCACGTCGACGGTCAGCACTAGCACCTCGCTGCCGCCGAAGAACGTGGGCAACACTGCGGAATTGCCCGCAACGG
TGAGAGAGACCGTCTCGAGGAGGCCGAGCATCGGGCTAAACAAACACGCGCCGTCTTCGTCGGTGGCGAACGATGCCGGC
AGCGATCATCCGCAGGACAACGAGATATCCGGAAGCGGCGTGGATCACGCTCAGGCGGGAATCAATGCGGCTGTGCCGGA
ACCGTCCGGTCCCTTCCGAGTGGATAGCGCCGAGCTGCCTAGCGGCGCCCATCAAGCCAAGCTGAATCTGGGCGCCGTGA
TCGCCCTAGGAGTGTTCGGCGGCTTTGTGTTCCTCGCCGCGGTGATCACGACGGTCGTTATACTGATACGCAGAAACCGC
GGAAGAAGCAGCAAGCATTACCGTCATCGTGCGTCGCCCGACTGCAACACCGTCGCCAGTTTCGACAGCAGTTCCTCGGA
GAGCCGAGGAGGTCTGAATCGCTACTACCGCCAAGCCTGGGAGAATCTGCACGAGACCGCCGGCCACAAGGCCAATCATC
CGCCGCTCCGTCGCAAGGAGACCCTGGATGAACCAGGATACCGAGAGAACTTCCGCGGTAACAACACCGAACGCGACGGC
TCGGAATTGGTCGTCAGCGACGTCGCCGCTTATCCGTCCAACAAGCACGCCAGCATCTCCGACAAGAAGCGCCATCATCA
CCATCATCATCATCATCACGGAAGCGCGACGCCCGATTGGAGACAGTCGCAATCCCATCATAGATACTAA
PEP: 
>LH23916-PA
DNNRVAGTNGAGCGYPGAPAHSSVRFTGTDIDDVIDEEDALLKDTALPEGTVATYSCERGFELLGPTRRECQADGTWTPE
GVPFCENMGFKISVSIGCPCRQAEPVQNHESNGSGFGILVEQDPAHSCVLNVAGGKAPMQSSSMDGGIPQRAVDGSSGQI
YTPQTCTLTRLEHKPWWYVNLLEPYMVQLVRLDFGKPCCVNGSSGTIVVRVGNNRPDLGMNPICNRFSGTLEEGQSLFLP
CNPPMPGAFVSVHLEATVSADIPVQLSLCEAFVYTDQALPIERCPQFRDQPPGSTATYNGKCYIFYNHQPLMFGEALNFC
RKRDGTLVDESNPALQGFVSWELWRRHRSDTSSQYWMGAVRDEKDPTLWRWTGSGEEVSVSFWSTPQGIENNCARYDGNK
GWLWSATPCVARLNFICQHQPRACGRPEQPPNSTMIVSTGPSTRISSGVYEVGAAVEYSCNAGSLLIGPATRTCLDTGFY
NEFPPVCKSKRSSKKTALKLSRTRLTAQCALIVLGIECGYPASIEHGGYTLINNTVSYLSQVLYSCEEGYEMTGRARLTC
DIDERWNGPPPRCEPVRCDPPATVAHSSIRIDDGNKGKNVPARNNFNQSLLVGSIVTYTCDKGYQLDGVRQILCLATGLY
DHVPPTCTVRPSTQKIRPYLTPRIRTTTSTSTVSTSTSLPPKNVGNTAELPATVRETVSRRPSIGLNKHAPSSSVANDAG
SDHPQDNEISGSGVDHAQAGINAAVPEPSGPFRVDSAELPSGAHQAKLNLGAVIALGVFGGFVFLAAVITTVVILIRRNR
GRSSKHYRHRASPDCNTVASFDSSSSESRGGLNRYYRQAWENLHETAGHKANHPPLRRKETLDEPGYRENFRGNNTERDG
SELVVSDVAAYPSNKHASISDKKRHHHHHHHHHGSATPDWRQSQSHHRY
Swiss-ProtSushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1
SUPERFAMILYSSF49785  Galactose-binding domain-like superfamily     
Gene3DG3DSA:2.60.120.260     
PfamPF00084  Sushi; Sushi repeat (SCR repeat)     
SMARTSM00032     
ProSiteProfilesPS50041  C_TYPE_LECTIN_2; C-type lectin domain profile.     
OrthologiGroup-00914    Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein     

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