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Gene detail [Fasta]

Species Linepithema humile
GeneLH24141
Positionscf7180001005073:9402..14560[GBrowse]
Ant Genomes Portalhttp://hymenopteragenome.org/cgi-bin/gb2/gbrowse/lhum_10/?name=LH24141
sequence mRNA: 
>LH24141-RA
ATGATCGTGTTGCCGGACGTTGAGATGGTATGCACGAGTTCGACCGAGTGCGACTTGAGATTTTACGACACGGCGGCGAA
GAAGTTCGATCTTCGCACATTGGTAATATCCAGTTTGGCGAACGCGGTCGTTTGCATGCACTATTACTTCAGCGCGAAGG
AAGACTCTTGCATCGTTCTCGGCGACACGAGTGGATCCGTCATAATCCTGAGCTTTAATCCCGCGGACAGAGGACCCTTC
AAGCAGAGCACCACTCGCGACATGACGGTTCTTCGCTACAACGACGTTAAGGGAGAAGAGGAAGGATTCAGCGTCACCGA
GTTCAAGAATATACATACAAACTGGGCGAGCCAGGTGGCTTATTACGGAAGTCTGCGTGTGTTCGCGTCGGGCAGTCAGT
GCGCGGATTGCTCCCTGTGCGTTTGCGAGGTGTCGGGAGCGAGAACGCAGTATAAATTCCGAGTGCTCATGGGGATATCC
TGCTTCGCGCTCTGCGAAGAAAGCCACACGCTAGCGACGGGCGGGCCGGACTGTATAGTTCGCGTTTGGAATCCATTTGT
TCCCCGAAAGGTGAACGCCGTGCTTCCGGGACACCGTTCGACCATCTGCGCGCTCGTCGTGACGGACACCGGCAAGCGTA
TTTACTCCCTGTCGAAGGACAGATGCATAAAAGTGTGGGATGTGCCAGCCCAAAACTGCATTCAGACATACAACAGATTA
CCGAGAGAGCTGAGCGAACACACCCCGATGTCTATAGTGTTCAACACGCTGACTCGCACAATGGTGATTGCTAGCATGAT
GATCGCCGTCCTCGTTTGCGAGCACGTGATCAACGAGGAAACCTCAGACGGCTACACGCACGCCAAAGGCGTCAGCTGCG
TTCTCTACAATCGCCTCTTTCAAGTGGTGAGTGCTTTATTTCGGAAATGGCAGACATTGCTTGAAACAATATCGCGATCA
TTTCCACCGGATTCGATTCGTGCATCATACGTTGGGGATCCTTGGACCGGACGCCTCTTACGGCTGATATCGCACGCCCA
CAGCGTCGTGCGACACGGGCAGCACAGCGACGTCGAGATTACGGCGGCTTGCTTCGACGAGTCCGAGCAATTTCTAGCGA
CCGGCGCCAGAGACGGATCGCTGAAAATATGGAACTTCAATACCGGCGACTGCGCACGCCAATTGACAGTTGATCATCAA
TGCGAAATAACGAGCGTCGCGTGGTGCGAGAATCGAATCTTGTGCTGCGGCTGGAATAAGCGCGTTACAGAATTAACGGC
TTTCGAGACCAACACGGGCAAAAAGCATTGGACGACTATTCACACCGACGATATTCTCTGCTCGGCGGCGAAACTTCCTC
AACTTTTAGCCACCGGAACGTACAATGGAGAGCTGATTCTCTGGAGGCTGGAAACGGGTCAAGTTTTTAGAAAGCACCAA
GTGATTGACGTCAGTAAGAGGCACGCTGCGACGAAGGAGGCGAACGCGCAAAAAGTTTTTGAACAATCAAATGAGACCGA
CAGACCCATCGATCAACAAACGAAAAAACTGACTCCGTGCGCGCATCAAGAATCAGCATTGAGCGTGATTCGCGTGATCG
CGGTGCGCGCGATGATCTTCCTAGCCGCGCGAGAAGTGAAACCGGACGTCGGCACGCTGCTGGTCGCCCTCGATTCCGGC
TTGGTGCAAGTGTGGACGCATCATCCGCCGACAGGATTTTTAGGAGCCTTCTCGGTTGTCCACACGCTGGGCGACTGCGC
CACGTCCTTGGCTACTGATCGCGAAAATCGATTTCTCGCAACAGGCCACAGCGTGGGATACGTAAAGGTCTGGCTGCTTT
CCAATTACATGCTACCGGACCCGCCGAAAGTGTCCATGCCGCTACTCAGATTGGAATTTCCGTTTCTGTGGAAGGACAGA
GTAAGCGGGAGGGCGAAGAGGGCGATACGAGGTCAAGCACTGCCGCTCCTGCTGACGTCTGTGCGCGCTCATACGCAGGG
AGTCACTTCTCTCCAGATCGTTTCCAGCGCGCGAATAATAGTCAGCGGCAGTGCGGATCGCACGGTACGTTTGTGGAGTC
TCGGAGGCCGTTACATATCCACGTTGGGCACGTTTAGAGAGTGGACTCCGATCTTGCCCGCTGTGCCTGTAGACAAGTAT
TTCGAGGATTATAAACTTCCAGCAGATGTCAAGGAATTCGCTAGCTGCACCACTTTGAAGGTACTTCACGGCGGTGTGAG
ACAAGTGCAACTGGAGATTGAGAAAGAGGAAATTGATGTCCCGAAAGAAATTCCCGAAGAGGAGCGACGTGTGCTGTACG
GCAAGCAATTTGACAGTTCGCTGCTTGAAAATTATTACAAATCACAATCGCCTAGTAAAACATATCAGGAATATTTAAGG
CTGGATAATAGTTTGCCTTATATACCGATCTATCTGCATTTACCAACACATTCCTTGATATCTATAAAGGCGCAAAAAAC
ACTCTTACTACAGAAAATGGAACTCGCTAAAAAGGTGTATTTAGGAAAAGCAATGAAGCCACTGCGCTTACATGTAACGG
ATCAAACTAAGTCCACGAAATCAAACTCGACTTCCATCATATCAGTACGCGGAGGCATTTTCCAGATTGCACTGGACGTA
CGCTTCAATCGACTTCTGTCTATACCTTGGAACAATTCCGTTAAATCTGGCGTGCACTTACGATGCTTCGGTAGCAGCTT
GTTGTTGAGCTCGTACTTCCGCTTCCCTGCGTTTCTCAGCTTCTTGTTCACGGCGTCTTTGTTCGGCGAGTAA
PEP: 
>LH24141-PA
MIVLPDVEMVCTSSTECDLRFYDTAAKKFDLRTLVISSLANAVVCMHYYFSAKEDSCIVLGDTSGSVIILSFNPADRGPF
KQSTTRDMTVLRYNDVKGEEEGFSVTEFKNIHTNWASQVAYYGSLRVFASGSQCADCSLCVCEVSGARTQYKFRVLMGIS
CFALCEESHTLATGGPDCIVRVWNPFVPRKVNAVLPGHRSTICALVVTDTGKRIYSLSKDRCIKVWDVPAQNCIQTYNRL
PRELSEHTPMSIVFNTLTRTMVIASMMIAVLVCEHVINEETSDGYTHAKGVSCVLYNRLFQVVSALFRKWQTLLETISRS
FPPDSIRASYVGDPWTGRLLRLISHAHSVVRHGQHSDVEITAACFDESEQFLATGARDGSLKIWNFNTGDCARQLTVDHQ
CEITSVAWCENRILCCGWNKRVTELTAFETNTGKKHWTTIHTDDILCSAAKLPQLLATGTYNGELILWRLETGQVFRKHQ
VIDVSKRHAATKEANAQKVFEQSNETDRPIDQQTKKLTPCAHQESALSVIRVIAVRAMIFLAAREVKPDVGTLLVALDSG
LVQVWTHHPPTGFLGAFSVVHTLGDCATSLATDRENRFLATGHSVGYVKVWLLSNYMLPDPPKVSMPLLRLEFPFLWKDR
VSGRAKRAIRGQALPLLLTSVRAHTQGVTSLQIVSSARIIVSGSADRTVRLWSLGGRYISTLGTFREWTPILPAVPVDKY
FEDYKLPADVKEFASCTTLKVLHGGVRQVQLEIEKEEIDVPKEIPEEERRVLYGKQFDSSLLENYYKSQSPSKTYQEYLR
LDNSLPYIPIYLHLPTHSLISIKAQKTLLLQKMELAKKVYLGKAMKPLRLHVTDQTKSTKSNSTSIISVRGGIFQIALDV
RFNRLLSIPWNNSVKSGVHLRCFGSSLLLSSYFRFPAFLSFLFTASLFGE
Swiss-ProtWD repeat-containing protein on Y chromosome
SUPERFAMILYSSF117289  Nucleoporin domain superfamily     
Gene3DG3DSA:2.130.10.10     
PfamPF00400  WD40; WD domain, G-beta repeat     
SMARTSM00320     
ProSiteProfilesPS50294  WD_REPEATS_REGION; Trp-Asp (WD) repeats circular profile.     
PRINTSPR00320     
ProSitePatternsPS00678  WD_REPEATS_1; Trp-Asp (WD) repeats signature.     

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