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Gene detail [Fasta]

Species Linepithema humile
GeneLH21918
Positionscf7180001005017:551549..559469[GBrowse]
Ant Genomes Portalhttp://hymenopteragenome.org/cgi-bin/gb2/gbrowse/lhum_10/?name=LH21918
sequence mRNA:
>LH21918-RA
ATGGCGAGGAAAAGCGATAATGCCAAGAGCATTAACATCGCGGTGGTCGGGCTTTCCGGCACGGAGAAGGACAAGGGACA
GGTCGGCGTCGGCAAGTCGTGCCTGTGCAATCGCTTCATGCGTTCCATGAGCGATGATTACAACGTGGAACATATTTCGG
TGTTGTCGCAGTCTGACTTCAGCGGACGTGTGGTGAACAACGATCACTTTTTGTACTGGGGCGAAGTGATGAAAATGGCG
GAGGACGGGACGGAGTTTCAATTTCAAGTAATAGAGCACACGGAGTTTATAGACGACGCGTCGTTTCAGCCGTTTAAAGG
CGGCAAGATGGAGCCGTACGCGAAGAGATGCGCGGCTACGAAAATCACGAGCGCGGAGAAGCTCATGTATATCTGCAAGA
ATCAGCTGGGCATAGAGAAGGAGTATGAGCAGAAGGTCCTGCCCGATGGTAAATTGAACATCGACGGGTTCCTGTGCGTG
TTCGACGTGAGTCTTGTGCCGAATAGAGCAATAGAGAAGCAAGTTGATCTTGTGGCGAATATCCTGAATAATTTGATGAA
AGCAAAGAAACCGATTGTCCTGGTGACAACGAAGAATGACGATGCGAACGAGCAGTTTGTCAAGGAAGCTGAAAAACTGA
TAATGCGCAAGGAGTACAAAGGATCGATTTTGATCATCGAAACCTCGGCGCACGAAAACATCAATGTAGACTTGGCTTTC
ATGATCCTGGCGCAGCTGATTGACAAGACAAAGATGCGCAGCAAAGTGGTGCCGTTCGCCGAGGCAGCCAGATCTAGGAA
AGAGCTGCTGGACGCGTCGACGGAATCATTGCAGAGATTAATCCGGATACACGTGACCGATTACCGCGCCTTGTGGTCGC
AGGCCTCGAAGAAGCTCGCGCAGCTCAAGGAGTTTTCCACTTTTGTAGAGTTGTTTGGCATTGAGGCGACGCAGAGACTG
TTCAGAAGGCACATTAAGAAACTGAAGGACGAGCAAATAGCGAAGAAGATACAGGGCTATCTGGACATGTTGCCGGATAT
CCTCCACGAAATCTGTCCCGATATATCGAATTTAATTAATGAAGAATGGTCGGCGGTGCAACAATACATAAAGGAGCATC
CTGATTTCGACCAGTATTTCTACGAGTGCCCCGAGGACATACCATGGATCGATTGTGATTTTGGAGAAAGCAACGGCACG
AAAATTCCTTACGACGTACTGGAGACTCCTGAGGCGGAAACCGTATTTAAAAATCACATAAACGCTTTACAGCAAGAGCA
ACGACGGCTAGAGTGGAAGAAACAATTTAAACAATTATTGGAAGAAACTGGTTATGTCACGCCTGGGAAGCATTTGTCTG
AAGTTCGGGTTTTATTTATGGGCAGAGAATGCTTTGAGGAGCTTTCTCATCACGATTGCCAAGAAATTTATGATCAGCAT
CAGAAGGAGATTATTGAAAAAGCAAAGCACAATTTTCAAGTAAGATCTCATGGAATGGTTACACCATTGCGTTATTGCAT
AAAGAAAGTACGGAGTGAATACAGTGGTGTGTTGCAGGAATTACTGTTGGAACATGCTGATTTATTTTATCATTTCAAAA
GTATAGCGCCTTCCGGCACTATCACACAAGACGACATAAAGGAAATCACAGACGCATTATTGGATGATTTTAGATACAAA
GCGTTAGATAGATTAGATCAAGATAGAAAGCTAATGTTGTTCCAACACTTGGGTTTCGTGCATTGTCCTATAAGGGAGCA
TTGCCCTGCTTATCCGAACTGCATGGACGCACTTATAGAAAGGATACTCGGAACGAAAGCTCACAGACCTTCCTCATGGA
ATCACAGTAGTCAGTGGCAGTTAACATCGGATAACAATCAGTTAAATTTAGTCATACTCGGAAGTAACGGACTGAGCGAG
GAGTTTGCTCGCGAAATAAGAGCCCAGACGGAGGACGACGAGGTGGAGATAGATTGTCAGTTGTACACGCTCGGATACCG
CATCATAGACGGCGATGTCGGATTGCCGCATAATTCCTTCACTACCTCCGATTTTATGCCACATGGATCTTTTTGCATCT
ACTCGAATGAGGATTCGTTTGAATACATTCGATCCTCCTTGGAAAAAACTTTATTGTCAAATCTGGAGCAAGAGGACAGG
CTGCCGTTCCAAGGTTTGCCCATTGTAATCATGTTTATGCCAGAAGCCGGTATCGACGAAATGGAGGCCATAAAACTCCG
AGAGGAGGGACAGAATCTTGCTGACAGCTTGCAATGCCCGTTCATCGATGTCTGCATAGACGATCTGGACCAGGAAAAGC
ACAAAAGATTTCCAAGTTCATTGGTAAAGGACGCTTTGCAGCAACTCATACAATCCATAAACCATAGAGCTGGTTTTTTA
AACATATACCAGAGCGTCATCGAATGTTTGGAGCCTGATATCAGGATAATAATGTGTATGTTTTGCGGCGATCCTTACTC
GGTCGAGAACGTACTCGGCCCGTTACTGAATCATCAATGCTGCTTTCTCAGCGGAGAAAGATCTATAGTTCTGGAAACGT
TTCTGGGAGACTGTAAACGTCGTGTCGAAGTTATTATCTCGAGTTTTCACGGAGCCAATGCGTTCAGGGATGAGTTAGTG
CATGGCTTCATACTCGTTTATTCCACAAAGAGGAAAGCCTCTCTTGCGACGTTAAATGCCTTTTCCGCGAACATACCGAA
TCTGCCGATACAAATAATGGCTGTGACCGACACTGGTGGCGCGAACGCTTTCTTCAGTAACGACTTAAGTCATCTACTTA
TCACAGAGGGAAATGCTATTGCGGACAAATTGGAGGCGCATTTTATGACATCCGCGTCTAGCTGTCAACAGAAAACCGCA
TTTTACACGCCTTTCTTCAAAGTGGTGTGGGAAAAGAAACCGGAGATCGAGCAAGCGTTCAACATGGAGGAACCCGGGAA
TCTGAACGACAGCGGGGAAGGTACCTTGGAGTATTCGGCTTTGCATCCGATGCCGCCGCCGCGACACGAGAGCTATCATC
TTCAAACGCCGGATGACGGAAGCGGCTCCGAGTCATACGAGCAATTGACGCCCGACGGTGATCTGGGCGACACTGGACTG
ACCGAACAGTTCGCCGATCATAGAGCAACGCCGAGCGACGACAGCGACATTTACAGCCAGGTCGACTTCTATCGAGAGGA
AAGAGAGAGAGAACTGATGAAAAACGAGGATATCACGAATAAGCTGTCCGGTTGGGTGAAGGAGACATTTATGCATCAAG
ACGGAGTTACGAACAGCTATTCGCATAGAGCCTTCACGACGGGCCGACGTTATATTTCTCAGGCTAAACCGCGACCGAAG
GGGAACAGTCAGACCTTGAAGCAGCCCGGGAAAATCAATCTGAAAGATTTCTCCAATGTGACAGACGCGATAGCCAGGAT
GACGATCGGCGAAAAGGACGAGCACGGTCCGAAACATACGATGGGCCACGCTCCCCTCGCCACACCGGAATTGGTGGATC
TCGGCTCCGAGTACGCGCAGGTGAAGGACGTTGTCCCGAGCATGTACTCCGCTTACGATGGCGATTATATGTATGCCTTG
GTGCAAGATTCAATTAGCAACAATAAATCCAAGCTGCGCCACCGACGCGAAAAGGGACAGCCATCATACAGTGACTCCGA
TTCAGAATGGAGTTCCTTGGAGAGGCAAAGAACAACTGATGTCTTGGGTAAAGCCAACAAGAAACCTTCGACACACAAAC
GAACGCGCAAAAAACGCACCGCGATACCGGTCGCGACACCCAAAGTGCCATCGCTGGCCAGTATGGGAAGCGGGGACGGT
CTAGTCGGCATGAACTACAATATGAAAGATGACAAAAATTGGCGCGTTGATGCAGCAGACAGAGTGTCCAGTGAGACTCC
CGACAGTTCTGAGTCGAGCGATCCAGAGCACACTTCGAGGTCCAGATCGAAACAATACAAATATGCCGCGGTTAATTTGC
GGAAGAGATTTTCCGGAAACTCTCTGCAACAGCAATATCTGCAACATCCGCTTAATATGAAGTATATGGCGCAAGAGATG
TTCAGTGCACCCTCCAAGCAAAGGAGTGAAAATACGTTTGGCATTCCAGATGACGAATCAAGTCTAGACGTTTCCTCACC
GCGAGAAATCAATTCACCTAGTTTTGGTATATTGAATAAGTCGAAGGACGGTGACAAGCTGACCAGGAAGAAAGACAAGC
AAAAGGCGAAGGAGGACGAAAAGTTGGAGAAAAGGAGACAAAAAGAGGAGAAGCTGAAGAAACACGCCGAGAAGGAGAAG
GAAAGGGAGAAAAAGAAGCAGGAGAAGATAAAACAGACCAAAGGCCCAGGTGGAACACCGATCTCGAGTCAGTCGCAGCA
ACCCTTGATTGAGGATTTCGCGCAGAGTGAAACGAATCGGATACCCTTGTTTCTCGAGAAGTGCGTACGATTTATCGAGG
AAGAAGGATTGGACTCGGAAGGAATATATAGGGTGCCCGGTAATCGTGCGCACGTGGAATTGCTTTTCCAAAAGTTCGAA
GAAGATGGTAATGTCGATATACATTCTTTGGATATTCCCGTAAATGCTGTCGCAACAGCCTTGAAAGATTTCTTTTCAAA
GAGGCTACCACCGCTTATTGACAAAGAGCGCATGAGCGAACTTGAGGATATATCAGGTGCACGAGGTATTAGCAAACCTA
TGTCGGCTACTTGCATGAATATGGAAGATCGAAGCGGCAGATTGTTGGCTTTGCGTCTGATGCTCAACAAGTTGAATCCC
GTTAATTTCGACGTTCTCAAGTTCATCTTTCAACATTTCGTAAAGGTTGCGGAGAATTGTAAACTCAACAGTATGGACAG
CAAAAACCTGGCGATCTGCTGGTGGCCTACGTTACTACCGATCGAATTCAACGATCTCGGCAGATTCGAGGCTATGAGGC
CGTACCTGGAGGACGTGGTCCAAACGATGATCGATCAGTATCCTTTCCTGTTCTGCGGCGAGGATGCCGTTGTGATGGTG
TAG
PEP:
>LH21918-PA
MARKSDNAKSINIAVVGLSGTEKDKGQVGVGKSCLCNRFMRSMSDDYNVEHISVLSQSDFSGRVVNNDHFLYWGEVMKMA
EDGTEFQFQVIEHTEFIDDASFQPFKGGKMEPYAKRCAATKITSAEKLMYICKNQLGIEKEYEQKVLPDGKLNIDGFLCV
FDVSLVPNRAIEKQVDLVANILNNLMKAKKPIVLVTTKNDDANEQFVKEAEKLIMRKEYKGSILIIETSAHENINVDLAF
MILAQLIDKTKMRSKVVPFAEAARSRKELLDASTESLQRLIRIHVTDYRALWSQASKKLAQLKEFSTFVELFGIEATQRL
FRRHIKKLKDEQIAKKIQGYLDMLPDILHEICPDISNLINEEWSAVQQYIKEHPDFDQYFYECPEDIPWIDCDFGESNGT
KIPYDVLETPEAETVFKNHINALQQEQRRLEWKKQFKQLLEETGYVTPGKHLSEVRVLFMGRECFEELSHHDCQEIYDQH
QKEIIEKAKHNFQVRSHGMVTPLRYCIKKVRSEYSGVLQELLLEHADLFYHFKSIAPSGTITQDDIKEITDALLDDFRYK
ALDRLDQDRKLMLFQHLGFVHCPIREHCPAYPNCMDALIERILGTKAHRPSSWNHSSQWQLTSDNNQLNLVILGSNGLSE
EFAREIRAQTEDDEVEIDCQLYTLGYRIIDGDVGLPHNSFTTSDFMPHGSFCIYSNEDSFEYIRSSLEKTLLSNLEQEDR
LPFQGLPIVIMFMPEAGIDEMEAIKLREEGQNLADSLQCPFIDVCIDDLDQEKHKRFPSSLVKDALQQLIQSINHRAGFL
NIYQSVIECLEPDIRIIMCMFCGDPYSVENVLGPLLNHQCCFLSGERSIVLETFLGDCKRRVEVIISSFHGANAFRDELV
HGFILVYSTKRKASLATLNAFSANIPNLPIQIMAVTDTGGANAFFSNDLSHLLITEGNAIADKLEAHFMTSASSCQQKTA
FYTPFFKVVWEKKPEIEQAFNMEEPGNLNDSGEGTLEYSALHPMPPPRHESYHLQTPDDGSGSESYEQLTPDGDLGDTGL
TEQFADHRATPSDDSDIYSQVDFYREERERELMKNEDITNKLSGWVKETFMHQDGVTNSYSHRAFTTGRRYISQAKPRPK
GNSQTLKQPGKINLKDFSNVTDAIARMTIGEKDEHGPKHTMGHAPLATPELVDLGSEYAQVKDVVPSMYSAYDGDYMYAL
VQDSISNNKSKLRHRREKGQPSYSDSDSEWSSLERQRTTDVLGKANKKPSTHKRTRKKRTAIPVATPKVPSLASMGSGDG
LVGMNYNMKDDKNWRVDAADRVSSETPDSSESSDPEHTSRSRSKQYKYAAVNLRKRFSGNSLQQQYLQHPLNMKYMAQEM
FSAPSKQRSENTFGIPDDESSLDVSSPREINSPSFGILNKSKDGDKLTRKKDKQKAKEDEKLEKRRQKEEKLKKHAEKEK
EREKKKQEKIKQTKGPGGTPISSQSQQPLIEDFAQSETNRIPLFLEKCVRFIEEEGLDSEGIYRVPGNRAHVELLFQKFE
EDGNVDIHSLDIPVNAVATALKDFFSKRLPPLIDKERMSELEDISGARGISKPMSATCMNMEDRSGRLLALRLMLNKLNP
VNFDVLKFIFQHFVKVAENCKLNSMDSKNLAICWWPTLLPIEFNDLGRFEAMRPYLEDVVQTMIDQYPFLFCGEDAVVMV

Swiss-ProtRho GTPase-activating protein 190
SUPERFAMILYSSF48350  GTPase activation domain, GAP superfamily     
Gene3DG3DSA:3.40.50.300     
PfamPF00620  RhoGAP; RhoGAP domain     
SMARTSM00324     
ProSiteProfilesPS50238  RHOGAP; Rho GTPase-activating proteins domain profile.     
CoilsCoil

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