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Gene detail [Fasta]

Species Linepithema humile
GeneLH12486
Positionscf7180001004609:5240..8416[GBrowse]
Ant Genomes Portalhttp://hymenopteragenome.org/cgi-bin/gb2/gbrowse/lhum_10/?name=LH12486
sequence mRNA: 
>LH12486-RA
ATGAATTTGGAACTGTTAGAATCTTTTGGGCAAAACTATCCAGAGGAATTTGACGGTGCATTAGATTGTATATCTCTTGC
GGTAACTTGTATGTTTAACAAGAGAGGAACATTACTTGCTGTTGGTTGCAATGATGGAAGAATTGTAATTTGGGATTTTT
TAACTCGTGGTATAGCTAAAATTATTAGTGCTCATGTACATCCTGTGTGTTCATTAAGTTGGTCTAGGAATGGTCATAAA
TTATTAAGTGCTTCTACGGATAATAATGTATGTATATGGGATGTTCTATCTGGAGAATGTGATCAGAAATACAGATTTCC
TTCTCCAATATTAAAAGTGCAGTTTCATCCAAGGAATCTCAACAAGTTTTTGGTATGCCCAATGCGTCATGCTGCAGTTA
TGGTTGATGTCGAAGGAACACATAAAGTTATACCACTTGATGAAGATAGCGACTTAAACATAGTAGCATCATTTGATCGA
CGTGGAGATTATGTATATACTGGTAATGCTCGTGGTAGAGTTTTAGTTTTAGATGCAGAGACATTAATTGTGAAAGCTTC
TTATAAAATAACGCAAGGCACTGCTAGTAATACAGCAGTAAAGAGTATAGAATTTGCACGACGAGGCTGTGGTTTTCTTG
TAAATACATCTGATAGAGTGATTCGCGTATATGACAGTACCGAAATATTAGCATGCGGTAAGGACGGTGAACCTGAGCCA
ATTCAAAAATTACAAGACCTTGTAAATAAAACAATGTGGAAAAAATGTTGTTTCTCGGGTGATGGAGAATATGTGTGCGC
TGGATCGGCCAGACAACATGCATTGTACGTATGGGAAAAAAGTATCGGAAATTTGGTGAAAATTTTACATGGAACTAAAG
GCGAACTTTTACTCGATGTTGTGTGGCATCCAGTAAGGCCAATTATCGCATCTATATCATCAGGTGTAGTTTCTATTTGG
GCGCAAAATCAAGTAGAAAATTGGTCTGCGTTTGCACCAGATTTCAAGGAATTGGATGAAAATGTTGAATATGAGGAAAG
GGAAAGTGAATTTGATTTGAGCGATGAAGATAAGTCTGTAGTGCAAGGAGAAGAGGCTCAAGACGAAGAAATAGAAGTTG
ATGTTGCTGCAATCGACAGAGTTCCTGCATTTTGTAGTTCTGACGAGGAAACTGAAGATATTGGTTCTCTTCAATTTTTA
CCTATATCTCCAGATGTAGAAGATTCTGAAGATAATCAAGTAACATCGCATGAACCACCGATGAAAAAACACCGTTCACA
CGAAATAAATTTGCAAGGGGCGCCAACTGATGAAACTCATCCCTTACTAAACAAAGGAAAAGATAAACCAACTACAAAGA
AAGGAAGACCAAGATTAGAACATAGAAAAGGAAAATAA
PEP: 
>LH12486-PA
MNLELLESFGQNYPEEFDGALDCISLAVTCMFNKRGTLLAVGCNDGRIVIWDFLTRGIAKIISAHVHPVCSLSWSRNGHK
LLSASTDNNVCIWDVLSGECDQKYRFPSPILKVQFHPRNLNKFLVCPMRHAAVMVDVEGTHKVIPLDEDSDLNIVASFDR
RGDYVYTGNARGRVLVLDAETLIVKASYKITQGTASNTAVKSIEFARRGCGFLVNTSDRVIRVYDSTEILACGKDGEPEP
IQKLQDLVNKTMWKKCCFSGDGEYVCAGSARQHALYVWEKSIGNLVKILHGTKGELLLDVVWHPVRPIIASISSGVVSIW
AQNQVENWSAFAPDFKELDENVEYEERESEFDLSDEDKSVVQGEEAQDEEIEVDVAAIDRVPAFCSSDEETEDIGSLQFL
PISPDVEDSEDNQVTSHEPPMKKHRSHEINLQGAPTDETHPLLNKGKDKPTTKKGRPRLEHRKGK
Swiss-ProtRetinoblastoma-binding protein 5 homolog
KEGG     K14961     
SUPERFAMILYSSF117289  Nucleoporin domain superfamily     
Gene3DG3DSA:2.130.10.10     
PfamPF00400  WD40; WD domain, G-beta repeat     
SMARTSM00320     
ProSiteProfilesPS50294  WD_REPEATS_REGION; Trp-Asp (WD) repeats circular profile.     
ProSitePatternsPS00678  WD_REPEATS_1; Trp-Asp (WD) repeats signature.     

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