Warning! We strongly recommend Internet Explorer (9.0 and later) and Google Chrome for better display.

Gene detail [Fasta]

Species Linepithema humile
GeneLH18215
Positionscf7180001004940:2320790..2351845[GBrowse]
Ant Genomes Portalhttp://hymenopteragenome.org/cgi-bin/gb2/gbrowse/lhum_10/?name=LH18215
sequence mRNA:
>LH18215-RA
ATGGCAGAGGTGGCGACGAAGAAGTCGATCAATGTAGTAAGTAGCAAGAAGAGCGAGGTGTGCGGTGTGCAGTCTAACAA
CGGTTTGATTGATTTGGATGGTCTAACCGCGAGTAACAACCAACTAATCTCATTGTGCGACGACGACGAAGACGATCTCG
TACTCACAAATAACACGCGCAACGAGCTCACCGGCGACGACAAGAGCCTGCAGGAGTTAATCGAGAGCGAGCTGGCGCTG
CGAATCTGCTCGAGCAAGAGCGACGAGGATGAGGGCGCCAACGCGGAGGAACCCGAGGAAATCGCCAGCCAGCCGGAGAC
GATCAAGAGGATCGTCCTGGACCGCCGGCAGGATCCCGTCGACATCAACGCGGAGTTTATAGCGGCCGAGAGCGAGCATT
ATTCCTTAATCGAGGAGCCCTACGGCCATCGGAACGGCCACACGTCCCCGGACGCCGACGGCGTGAAACCGGAACCGGTG
CACTTCCGCGATGAGCAGAAGGAACAGGTGCTCCTCGAGCAGCCGGAAGTCGGCGCAGCGCCGATAATCGTGCAGAAAGC
GTGCGACGACGAGCAGGCGTCGACTCACGGCGAGCCTATCAGCGGCGACGACAGCGAACACTATCAAGCGACTATCGTCA
AGGACGCCGCGCTTCCCACAGACGAGACGGACTTCAGCAACCCACTCGCGGACGAAACGAGCTCTCGGTCTTTCCCGGCT
TCTACGCTTTGTCCCGCGGTCAAGTATCAACATGAGGAGGAACTGATGCAGAAGAACGATGCGGAACAAAAGCACGCGGG
CGTCGCCCCGAACGCCGAACAGGCGCCGCTTTCGGCCGGTTTGCAGGCCGCTCAGTTGTCCGACAACTCTAATGAAACGA
TCTACCGGCCGGAAAAAAATCTCGAGGAGCAGAAATCCCCCAACGAGTCTTCCGCGAATGCCGATAATCTCGATGATTCC
GAACACAGTCGTGTCGAGCAGGTTTCAACGCTGCCGGGCGAACTATCTCCCTCTAAAACGATCGGGGAAACAGATCTGAA
GCTGCACGAAAAGCTGGAAGAGGATTTTCATGTGCAATCGATTCAAGAGCAACTCGAGATGGAAACAGCCAGCACGCAGG
AGTTTCTCGACATAGAACGTCGTGTGTTGAGCGAGGAAACCGATCAGGAGGCGCCTCTGATCGTGGTGTCGTCGGAAGTC
GGCGAATTGCAAACGATATCGGAATCGATCTCCGAAAATGAGTCGGCGGAATTCGGCAAGGAGATCGCGGAGGATGCGCA
GAACCCGGTGGACGAGTCCTCGAGCGAACTCTCAGCGTCGGACTCGACCTTCATCGAGAAGACCGAGGTCGTAGTGTCGG
ATACGGGCGTGACGATCTACTCGGAGACGCGACCGGCAGCCGAACAGATCGAGAATCTGGATTCGTGGACCACAGTTGAG
GAGGCCACGAGGCCCGCCGACGCCGAGGAGCAACGCGAGGACGCGTCGAAACGCGATGTTAACGAAGCGACGAGAGACGA
TAACGAGGATAGGCTGGACGATTCGCTCGCGCCCTCGTCACCCCGCGCGCCCCTAGCAACACCAGACGAGACGGAGACGA
GCGATGTTTCTAACGCCTGCGATAGCGAAAGCCGCGAGGAAACGGTGACCACCAGCTCCAATGTGGTGACCTCCTCGAAG
GGCGGGACCAAAACGAAGAAGAAGAAGATCGAGGGCGTCGCTGGTAACGATGCCTCCTCGCCGAACCTTACGCCGCGCAC
AAAGAAAACCAAGAAGAGCAAGAAGAGCGATCTCGAGAAGGAGAACATCTCCGTGAACAGTAACTTACGAGACGCAAGCA
TGCACACGGGTACACGGCGATCACATTCGGAGACGATCGATTTCTCCGACGAGGACGATTTGTCGAATGTCAACGTTAAG
TCATTGGTGCAAAACGAGTGTGCTAACACCGTTTGCCGCATGCACACTGACTCGCCTGCATTTTTGTTCCTCTTCTTTCT
GCGCATGCAGACACAGAACTACGTCTCGGAGACGAGTCGCAACGATCAGGAGAAGCTGTGCCGGGAACGGATCGCGACCG
GCGTGTCCATCAAGCAATTATGTCGCAGCTTTGGCGACATCTCGAACATGAGCGACGGCGATCAGGCGACTTTCGGAAAA
GCGAACCACGCGATGGAAATCGAGGAGAAAGCGAGATCGATGGGTGATCTGAGATTATGCGAGCGGGGTTACTCGAGATT
CGCCAAAGACGCACCCGTCTTCACCGGGGTGTCGGTCAAGGCCCTCAGGGCTTCCTACTGTAGTTTGGCAAGCTTAACGA
GCGAGGGTAAGGACAAGGACCGGGCATGCGAGAGGCCGAAGCTCGAGAAATCGAGCTTTAACAAATTCGATGCTCTCACC
AAGAAGACAGTTCTGCATGTGCGTTCGGTTGACGCGGCAAAAGTGCAACAACAGCTAAATGCCGTGGGTCAGAATAGCGA
AGCGAATACGAATTGTCGCAGCTGCGGCAAGGTCGTGTTCCAAATGGAGCAGACAAAGGCCGAGGGACTGGTCTGGCACA
AGAATTGCTTCCGGTGCGTGCAGTGCAGCAAGCAGCTTAACGTGGACAATTACGAGAGCCACGAGAGTACGCTGTACTGT
AAGCCACACTTCAAGGAGCTCTTCCAACCGAAACCGGTCGAAGAGTCCGACCAGCCCGTGCGACCTCGAAAGCCGGAGCT
GATCATACGGGAGAACGAGCCGAAAGAATTGCCGCCCGATGTGGTCAGAGCTTCCGACAAACCCGACTTGGGACTTGAGG
AACTCTCGAGCTTAAACGTCAAGTCGCGCTTCCAAGTTTTCGAGAAAGCTAGCATGGAGAACTCAAATGATATCGAGAGA
TCGCCGTCGCAGATCGCCGTCAAGAGATCGCCCAGCATCCTCAGCAAACTGGCCAATAAACATGTTACAAGTGTAGAGAA
GCCGACCGATAATCATTCATGCGGAATGTCCGTAATCACTACGTACGTTTTCTCATTCAGATTCCAGGCCAAAGGCATGG
ATATCGGCGTGGCGGATGAATCTCTCAATGGCATACCCTACGAGGAATCCAGCGAAAGTGAAGATGAAGTGGAAACGGAG
GAAACCGAAGAACTGGAGACCGAAATCATAAAATCGAAACGCACCACGCGCGAGCGTCCGATTAGTTTCTCGAAAATGGA
CGATATCAAAAATCGTTGGGAGTCGACCAGTCAACAAGGAAGGCGCGAGATTCAACGCGAAGCTAGGAAGGAAGAAATCG
CAGGAATTCGTTCGCGATTGTTCATGGGTAAACAGGGTAAGATGAAGGAGATGTACCAGCAGGCGGTAGCCGGAAGCGAC
CGCGTTACAAAGATAAATGCAGCAGAGGAGATCCAGCACTCGACTGCCCACGCTCGCTCCATCAAAGAGAGATTCGAACG
GGGTGAGCCAATTGCAGCCTCGGACGACGAAACCGACAGTAAACCGAAACCGGAGAAAGCCGACGAGGAGGTGATTGCAG
CAGGTACGAATTGGTATCAGCAGAAAATCGCGATCGCTCTTTTTGGAGCTGGACGCCTCTGCAGCGAAGACAGGACGTCC
AGTAACGCCAGTGCAACCGAAAACACCGACCGAAACCTCACGGCGCGCACGAGACTAATGGTAATTCTCAAAACATTTGC
GGAAAAGGCATTTATGGGTCGTCAAGTCTCAGACGATGTGGTACGCAGCTCGGATACGGCCGAGGAGATTCACGTAGAAA
CGTCGGAAATTACGAACAAGTTCAAATTCTTCGAGACTTACAAGGAACCGGAGAAACAGCGGAAGCAGTTTCGAATCACG
CCGCCTCGCGATGGTCAAGTCAAGGTTCGATCCTTTGACTTTATGGATTCACCAGATCGAGAAATCTACCGCGATCCCGA
CGTGGTCAGAGCCGACGACAGAGTGAACGAGGTAGTGCACACGGACACGGCGAGGAAGATGCTGTCCATCTTCCGACAAA
TGGAGGAAAACGCGAGCAAGGAAGAATTGCCGGAGGGCCCGAAACCCCTAAAGCGCTTCACGCCGCCTCCCGAAGACAAG
TACGCCAAGGCGACGGCCTCGGACTCGGAAGAGGACGAGGAAGAAGAGGGCGAGGAGTCCGACGGTGACGACAGTGCCGA
GGAAAGAGATCCCAACTACGTCCGCAGCTCAGATAAGGTCGAGGACGAGTTCTTGAAACAGGCGCAGAACGCAGCGCGCG
CCAAGACTCTACGCGCTAAGTTCGAGCACTGGGAGGAGACCGACGGCAAAGTCAGCAATCACCACATCGCCGAAATAGAG
ATGGCTCAAGGCACGGGCGATCAGTCGAGCATAGAATCTGCGAGCAGTCTGAGGGCTCGTTTCGAGTCCCTCGGCTCGCA
GACCAACGAATCCCCGCGCGCACCGAAGGTCAAAGTCAATCGATTTGTGGAGATCCAGACGACCTGCACGGACGTGTGCG
AAAGCTGTCAAAAGAAGGTCTACCCCTTGGAGAAAGTTGAGACCAATAACAAAATCTTTCACAAGCAATGCTTCCGGTGT
CTCCAGTGCAACTGCATTTTAAGGATGGACTCTTTCACCCTGAACAATGGGAAGCTGTACTGCATCCCGCACTTCAAGCA
ACTCTTCATCACACGAGGAAACTACGACGAGGGCTTTGGCGTCGATCCACACAAGAACAAATGGGCGACGAACTCCAACA
ATTCCACAAGCCCGTCGCCAATCGCGGTCTCAAATGGCGAGCTCTGA
PEP:
>LH18215-PA
MAEVATKKSINVVSSKKSEVCGVQSNNGLIDLDGLTASNNQLISLCDDDEDDLVLTNNTRNELTGDDKSLQELIESELAL
RICSSKSDEDEGANAEEPEEIASQPETIKRIVLDRRQDPVDINAEFIAAESEHYSLIEEPYGHRNGHTSPDADGVKPEPV
HFRDEQKEQVLLEQPEVGAAPIIVQKACDDEQASTHGEPISGDDSEHYQATIVKDAALPTDETDFSNPLADETSSRSFPA
STLCPAVKYQHEEELMQKNDAEQKHAGVAPNAEQAPLSAGLQAAQLSDNSNETIYRPEKNLEEQKSPNESSANADNLDDS
EHSRVEQVSTLPGELSPSKTIGETDLKLHEKLEEDFHVQSIQEQLEMETASTQEFLDIERRVLSEETDQEAPLIVVSSEV
GELQTISESISENESAEFGKEIAEDAQNPVDESSSELSASDSTFIEKTEVVVSDTGVTIYSETRPAAEQIENLDSWTTVE
EATRPADAEEQREDASKRDVNEATRDDNEDRLDDSLAPSSPRAPLATPDETETSDVSNACDSESREETVTTSSNVVTSSK
GGTKTKKKKIEGVAGNDASSPNLTPRTKKTKKSKKSDLEKENISVNSNLRDASMHTGTRRSHSETIDFSDEDDLSNVNVK
SLVQNECANTVCRMHTDSPAFLFLFFLRMQTQNYVSETSRNDQEKLCRERIATGVSIKQLCRSFGDISNMSDGDQATFGK
ANHAMEIEEKARSMGDLRLCERGYSRFAKDAPVFTGVSVKALRASYCSLASLTSEGKDKDRACERPKLEKSSFNKFDALT
KKTVLHVRSVDAAKVQQQLNAVGQNSEANTNCRSCGKVVFQMEQTKAEGLVWHKNCFRCVQCSKQLNVDNYESHESTLYC
KPHFKELFQPKPVEESDQPVRPRKPELIIRENEPKELPPDVVRASDKPDLGLEELSSLNVKSRFQVFEKASMENSNDIER
SPSQIAVKRSPSILSKLANKHVTSVEKPTDNHSCGMSVITTYVFSFRFQAKGMDIGVADESLNGIPYEESSESEDEVETE
ETEELETEIIKSKRTTRERPISFSKMDDIKNRWESTSQQGRREIQREARKEEIAGIRSRLFMGKQGKMKEMYQQAVAGSD
RVTKINAAEEIQHSTAHARSIKERFERGEPIAASDDETDSKPKPEKADEEVIAAGTNWYQQKIAIALFGAGRLCSEDRTS
SNASATENTDRNLTARTRLMVILKTFAEKAFMGRQVSDDVVRSSDTAEEIHVETSEITNKFKFFETYKEPEKQRKQFRIT
PPRDGQVKVRSFDFMDSPDREIYRDPDVVRADDRVNEVVHTDTARKMLSIFRQMEENASKEELPEGPKPLKRFTPPPEDK
YAKATASDSEEDEEEEGEESDGDDSAEERDPNYVRSSDKVEDEFLKQAQNAARAKTLRAKFEHWEETDGKVSNHHIAEIE
MAQGTGDQSSIESASSLRARFESLGSQTNESPRAPKVKVNRFVEIQTTCTDVCESCQKKVYPLEKVETNNKIFHKQCFRC
LQCNCILRMDSFTLNNGKLYCIPHFKQLFITRGNYDEGFGVDPHKNKWATNSNNSTSPSPIAVSNGEL
Swiss-ProtLIM domain and actin-binding protein 1
SUPERFAMILYSSF57716  Glucocorticoid receptor-like (DNA-binding domain) superfamily     
Gene3DG3DSA:2.10.110.10     
PfamPF00412  LIM; LIM domain     
SMARTSM00132     
ProSiteProfilesPS50023  LIM_DOMAIN_2; LIM domain profile.     
CoilsCoil
ProSitePatternsPS00478  LIM_DOMAIN_1; LIM zinc-binding domain signature.     

You might be interested in these researchers

You might be interested in these references