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Gene detail [Fasta]

Species Linepithema humile
GeneLH25243
Positionscf7180001005086:390775..399424[GBrowse]
Ant Genomes Portalhttp://hymenopteragenome.org/cgi-bin/gb2/gbrowse/lhum_10/?name=LH25243
sequence mRNA:
>LH25243-RA
GTGGAAGGATGGCTCAGAACAATTATTTCGGCTTTACTCACGGCGGAACGCAATATGGGGCAACCAGCGCTGCCGCGTAT
CAGACCGGACAAGCGGGATACGCGGTAACTCCAGCGGCGACTGCCGCTACGTATACCCAGCGTCCCGCTGCCGCCGCTGC
TACTGGGTACGAAACCTATCAAGCAGCTGCTGCTGCTGCAGCAACTGGCACAACGTACGCAGCTGCTAATCCTGGCACTG
TGGCTCAAACTTATGATTACGGTTACGGGCGCACTGCACCGGCAGCTACGTACGACGCTACCAAGACTTACTATCAACAG
CCAGCAGCTGCAGCAGCAACTTATACTACCACTGAAACACACTATCAAGCTGCAAAACCTGCTTATAGTACGACCAGTGC
CTATACTGGCACTGCTAGACAAGCCACCACCACTGGACAAGCTAAGACTTATCAGGCATCTAGTACAGCTTATCAGCAAT
CTAATCCTACGCAGAGCGCGACTTACTCTTCTGGATACACAGCTCCGGCTACGCCTGCCGCTACACCATCAACTGCGACA
AATAAAACGGCGAGTACAACGTATTCCGGCTACGACGCAGCGCTATATAGCGCTGCGACTATGTATGTAGCCCAACAGAG
TGCAAACAGCAATTCAACTAACCAGAAGACTGGAGGTTGGCAGGGCTACGGACGAAAGGGATTCGGAGCTGGTGGGGGAG
GGATGAAGGCAATGCGGCCCAAGCAGCCTCCCAAGCCACAGCAACTACACTATTGCGATGTCTGTAAGATCAGCTGTGCC
GGACCTCAAACCTATCGCGAGCATCTGGAGGGTCAAAAGCACAAGAAGAAGGAAGCCTCCCTGAAGGTACCCCAACAGCC
TCCAACGCGCGGAGCGGGCAACAGCCTTCGTTGCGAGCTTTGTGACGTGACTTGTACAGGAAATGATGCTTACGCTGCTC
ACATCAGGGGTGCTAAGCATCAAAAGGTGGTGAAGCTGCATACTAAGCTTGGAAAGCCAATTCCGAGTGCGGATCCTACC
GTTTTGAATCCGAAACCAGCGGCAGCCGCAAAGGCCGCGGCGACCAAAAAGCCAACAGTGACGGCAACACCTAAAATCAA
TTTCGTCGCTTCTGGCAATTTGGGCACGGTAAATCAGAATCAAGCGGCTGAGGTGAAGCAGGAGGAGCCAGCTACTGAAG
AAGCTGTGGAAGAAGCAGCAGTCGACGAAAAGGATATTCAACCGGTCGGTCAAGAGTATATCGAAGAGAACAAATCAGAG
GATGGAAAGATTATAAGTTTCAATTGTAAATTGTGCGAATGTCGATTCAACGATCCCAATGCCAAAGATATGCATATGAA
GGGTCGCCGTCATAGATTCGCTTACAAGAAGAAGGTCAATCCCGATTTGGTGGTCGACATGAAACCTAGTCTGAAGCAGC
GCAAGATGTTGGAAGAGAAACTACGTAGGCAACAAATGCGTGACGAGTATCTACGTCGCAGGGAAGAGATTAATCAACTG
GGACCTATGGGACCTATGATGGACGAGGAGATGATGTATTGGGAAGAGAGACGCCGCTATGAGGAGGAATGCGAATATTA
CGAGTGGTACCGACGATACGGACGCGGTCCGGGCGCACCGCCGATTCCGCGACCGTTCCCAGGACCTCCGCCCATGATGA
TGTTCCCGGGTCCACAAAGACGACCGGATTCATCAGACGATAAGCATGTGTTGGCACATCATACAACCATTTATCCCAAG
GAACAAGAATTACTGGCAGTTCAGAAAATAGTTTCACACACGGAGAAGGCGTTGAAATTTGTGTCCGACACTTTAGCCGA
GGCTGGTAAGAAAAATAGTCCTGCAAATGCTAACGCTACTGCAACGACACCTGTGGCAACTGGTGGTACACCGCAGACAA
ATGCGGACGCGTTGAAAAAGGAGGAGGCCGACAAGAAGAAGATAGTCACGCCACAGAAGGAAGATGGCAGTGATGGGAAT
CTCTTTTCATTTCAAAAGGAAAAGGAAGATTCGAGAATACTTCGTGGTGTTATGCGCGTCGGAAATTTGGCCAAAGGACT
TTTGCTATCCGGAGATAATCACGTTTGCCTCGTCGTTTTGTGCGCTGAAAAACCGACAAGGACATTGCTCAATAAGGTTG
CTGAGATTCTACCCGGTGAACTGAAGAACGTAGCTCCCGAAGAGACCTACAACGTTGGCAAGCACCCGGAATCTGCAGCT
TTAACGGTCTCGGGGGGAACAGTGACCGTCAGCGTGACGCTCACAAGTCCCCTGATGCGCGAGACACCAAAATCGACCGC
GACAGCAGATAATGCTGGACAGCAGCAACAGGATGCTGCTCAACTGCAAGCGACGCCCGCGGCCCCCGCTGTGACGAAAC
CAGATCCGCCAGATGTACTTCCCAAGGCTAAGTGTTTGGAGGCTTTAGCTGCACTCAGGCATGCGAAGTGGTTTCAGGCT
AGAGCCACCTCGCTGCAGAGCTGCGTTATGGTTATCCGTATAATGCGCGACCTTTGCAATCGTGTACCAACGTGGGGTCC
GTTAAATCCTTGGGCATTGGAGTTATTGACTGAGAAAGTGATCAGCACCGCTGGAGGTCCTCTTAGTCCCGGCGAAGCTT
TGAGAAGGCTTTTAGAGTGCGTAGCTGGAGGAATATTGCTTCCAGGCAGTCCAGGATTATCCGATCCATGTGAGAAGGAG
CCGGTTGACGCGATAGGAAACATGACGTCTCAACAAAGAGAAGACATCACCGCATCCGCGCAACACGCGTTACGGCTGGT
AGCGTTCCGTCAGATTCACAAAGTCCTAGGTATGGAGCAGCTGCCGCCGCCGAAATTCAAAGGACGATTCGCCAGAAAAC
GAAGACGTGACAACAGCAACGGCGAAGGCACGGACAGCGAAGCTTCAAAGAAGGATAAGAAAGCAGAGGAGATCAAAATG
GAAACAGATTCGAAGTAGAAGAGAGATCTACCAAAAAATTCGTTCTACGAATTACACCTATTAACTTATCTAATATAAAA
AAAGAAAAAAAAATATTTCTCCGCCGTGTCAGTTGCTTGTTTAGGAACAGAAGTATATCTTCGGATCAAAACAATTTGGT
ATTAAGTGATACTTGTTGCGATGTAGGATGCGCGTAATCCAAAAACGATTATGCTAAAAGACGACGAGGGATGCTTATCA
AGTTGCAATAGTGGGCATTTGTTGAATCCACTCTCTCCTGTTGCAGATTATTCATTTTAGACCAATTGTGACGATTCTAA
TTGGTGTAAAATGAGTAACAGTGTGGTCATTATTTTCCTTCTACGAAATATTTCGTATTTAATCATTATCTAATATGTGC
ATCGCAAAACAAAAGATGTAGAGTTTACGGCAAATAAATAAAGCTTAGATCGATTGATAAACTTTCTCGAACAGGCAATT
GGTGCGATTAGTTTTGATCTTAGCTTTATATCGAAACGAACCTGATGAATGCGTTCACATTGATTTGTTCTGATTCATCT
CGGTCACGGTGGATATGAACAGGAAAAATTGAAACGATTGAGTGGTAGAACGCGACGATGAACATTTATAAGTTTGACTT
TAAGAATAGATAATAGATTGTATTTGAGAATTTGTGTGTATGTTGTGTGTGTAGTCATACCGACGTGTAGAAAATATTAT
ACCCTCCTTCTCTCACACTCCTGCACAAAAGTGACAAACTATTTACTATGTATGCTTTTGACACGTGCATCGTTCACGTG
AAGAGTACAGACGAGATATTTAGAAGTCAACGAATTGGATGCTTTAACGATATCTAACGCGAAACAAGTGTTAACATTTT
TTAATAGATCACTGAATTAATTTGAGTTTCATTTGCAGAATACAAAGACGTGATATTAACTTTTCAAACATTTTACCGCC
GTTTAAGTGGTTTTTTTTTCCAATCCTGTCTAGATTTTCTGTTCTGTATTTTCAGATCATCATTGAATAAAAAGAATATG
TACAATGCAA
PEP:
>LH25243-PA
MAQNNYFGFTHGGTQYGATSAAAYQTGQAGYAVTPAATAATYTQRPAAAAATGYETYQAAAAAAATGTTYAAANPGTVAQ
TYDYGYGRTAPAATYDATKTYYQQPAAAAATYTTTETHYQAAKPAYSTTSAYTGTARQATTTGQAKTYQASSTAYQQSNP
TQSATYSSGYTAPATPAATPSTATNKTASTTYSGYDAALYSAATMYVAQQSANSNSTNQKTGGWQGYGRKGFGAGGGGMK
AMRPKQPPKPQQLHYCDVCKISCAGPQTYREHLEGQKHKKKEASLKVPQQPPTRGAGNSLRCELCDVTCTGNDAYAAHIR
GAKHQKVVKLHTKLGKPIPSADPTVLNPKPAAAAKAAATKKPTVTATPKINFVASGNLGTVNQNQAAEVKQEEPATEEAV
EEAAVDEKDIQPVGQEYIEENKSEDGKIISFNCKLCECRFNDPNAKDMHMKGRRHRFAYKKKVNPDLVVDMKPSLKQRKM
LEEKLRRQQMRDEYLRRREEINQLGPMGPMMDEEMMYWEERRRYEEECEYYEWYRRYGRGPGAPPIPRPFPGPPPMMMFP
GPQRRPDSSDDKHVLAHHTTIYPKEQELLAVQKIVSHTEKALKFVSDTLAEAGKKNSPANANATATTPVATGGTPQTNAD
ALKKEEADKKKIVTPQKEDGSDGNLFSFQKEKEDSRILRGVMRVGNLAKGLLLSGDNHVCLVVLCAEKPTRTLLNKVAEI
LPGELKNVAPEETYNVGKHPESAALTVSGGTVTVSVTLTSPLMRETPKSTATADNAGQQQQDAAQLQATPAAPAVTKPDP
PDVLPKAKCLEALAALRHAKWFQARATSLQSCVMVIRIMRDLCNRVPTWGPLNPWALELLTEKVISTAGGPLSPGEALRR
LLECVAGGILLPGSPGLSDPCEKEPVDAIGNMTSQQREDITASAQHALRLVAFRQIHKVLGMEQLPPPKFKGRFARKRRR
DNSNGEGTDSEASKKDKKAEEIKMETDSK
Swiss-ProtZinc finger RNA-binding protein
KEGG     K13203     
SUPERFAMILYSSF57667  beta-beta-alpha zinc fingers superfamily     
PfamPF07528  DZF; DZF domain     
SMARTSM00451     
ProSiteProfilesPS51703  DZF; DZF domain profile.     
ProSitePatternsPS00028  ZINC_FINGER_C2H2_1; Zinc finger C2H2 type domain signature.     

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