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Gene detail [Fasta]

Species Linepithema humile
GeneLH22085
Positionscf7180001005018:1234578..1240452[GBrowse]
Ant Genomes Portalhttp://hymenopteragenome.org/cgi-bin/gb2/gbrowse/lhum_10/?name=LH22085
sequence mRNA:
>LH22085-RA
ATGCCAGAGCGTCCGGCAGACCGGTCGGTGCTATCGAGAGCTTCATTGAAGTGGAGCAAATTAGTAGCGCAACAGCAGCA
GCAGCAGCAGCAGCAGCAGCAGCAGCAGCAACAGCAGCAGCAGCAGCAGAATCAGACTCGTGGAAGCCATCAGCAAGCAC
CTGTTTATGAAAACATAGACTACTATCCGCAGCAGAGTCAGCCACATCCACCCTACTATCATCCAATTGAATCTAGGAAA
AGTCCGAAGAGTAGTCCTAGAACTTCATTAGTCGGTGACTCCTACGAAGGAAGTTACAGGAAAGCTCAGCCGCAAGTGCC
AACTGGTAATCGATACCAGAGTACATCCCCAGCGAAAGAACTACCGCCATACGAGGCTCCACCCGTATACGAGAACATAC
AGGAAGTACACTTCTCTGAGAATAAGCCAGGACCTCAGGTTCCGACGAATTATTACCATCCAGCGAACATCAATGGCGGT
GACTATGTTGTTATGACCGGAAAAGTAGGCCAATCTCAAAGTCAACGTGGTATACCTCAAAATTTATCATATACGCAACA
GAGAAGCGGAAGCATGCGCGGTCAGAGTTACGATAGTTCAAATTTACAGCGATCAATCGACTCATCTACATCTAGATACT
TACAGGGTACGTCCTCCGTCTCCTCCTCGGATCACCAGGCTGGAAGAAGCGCCTACGTGCCTCCTTCCGAGCTGCAGCCA
AATAGAAACTTCAATTATAGCGCGGATCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAACAGCAGCAGCAGCAGCA
ACAGCAGCAATCTCCAAGAACTGCTTTACCTTATCACAGCGAATCCCCACCGATACGCTTACCACCGGAATCGCATCACT
ATCGCGGTTCACTGGAAAACACTATGAGCGGGCAACAAGGATTCCGTGCTGCAAGCCAGGTCGACAACAGCCAACTCTCT
CAGTTTCGGCAGGACAACCCGCAGAATTACAAACAATACGTTGAGCCGTCTTCAAGGTCTGCTAACACGAACTTTTCAGG
AGATTCGCAAGCCAGGAACTCACCAGTGTACGGAATTCGTCCAGGAGAGCCGACAGCGTGTCGCAACTCTCCGTGCTATT
CGCCGAATCGAGCGATGCCTCAAAACGAAAGGAACTATCATCATCAGGAGAATCGATCGGACTTCCCCGTGAGAAATTCT
CCCGTTTACTCCTCAAATCGTTCCGCCGAGCACTTGAGATTAGGCATGCTGCAGCAGAACGACAGGAGTTACATGTCGGA
TGCGACGGACCCCACGGCTACGAGGAGCTCACCTCTGTACTCTCCGAGCCGCGATCTCACCAGATCCATTATCGCTAACA
ACAATGCAGTAAGAGAATCTCCGAAAACAAGCCCGACACACGGCCAAATCTCATCAGACCTTGTTTCGCAGAATATGCTC
AACTCACCCAGACACGGACCGCCCCTTTCGTCGAACAATTCCGTCGGGAGTCCTGTGCGCGGACAGGTGCAGGCCGCCGT
GACCAGCGCGTCGACCACAGCCAGCGAGTCTGACGTGAACACCGGCCCCAGGATCACTAGTCTTCCGCCCGGCGTGACAA
GCGGAGTGGCAGGACCCGTGCTTTTAAACGCCGGCGTACCTGTACTGCAGCGATCCACCGATCCAGAGGCAGAGGAGAAA
AAGTCTGTTAGTCCGCCGATTAAGCCAGCACCGGGAAAGGGGTTGCTACCCTACAATGTCATTTCTAGGCCCTCGGGACC
GACGGAAGCAGAGAGAAAAATAGAGGAGCTGACGAGGCAACTTGAAGAGGAAATGGAAAAGCAGGAAGAGGAGGGAGAAT
ACTTCGGTATTTGCCATACGTGCGGTGAAAAAGTGACCGGCGCCGGACAGGCTTGTCAAGCGATGGGCAATCTCTACCAC
ACCAATTGCTTCATATGCTGTTCCTGCGGAAGGGCGCTCCGCGGCAAAGCCTTCTACAACGTTCACGGGAGGGTTTACTG
CGAGGAAGACTATTTGTATTCCGGTTTCCAGCAGACGGCCGAGAAATGCGCGATTTGCGGTCACCTTATTATGGAAATGA
TATTGCAAGCGATGGGCAAATCCTATCATCCGGGCTGCTTCAGGTGTTGCGTGTGCAACGAATGCCTCGACGGTGTTCCT
TTCACAGTTGACGTCGACAATAAAATCTACTGCGTCAACGATTACCACAGAATGTTCGCTCCCAAGTGCGCGTCTTGTGG
AAAAGGGATAACGCCGGTTGAAGGAACCGAGGAGACGGTCAGGGTAGTTTCCATGGACAAAGACTTTCACGTGGACTGCT
ACGTTTGCGAGGATTGCGGTATGCAATTGACAGACGAACCGGATAAACGGTGCTACCCACTCGACGGCAGGCTTATGTGT
CGTGCGTGTCACATCCAACGCATATCGCACACGCAGCCAAGAGCGCCGCAGCCGGTGTCAGCTAGCTATCAGTTTATGGG
CTAA
PEP:
>LH22085-PA
MPERPADRSVLSRASLKWSKLVAQQQQQQQQQQQQQQQQQQQQNQTRGSHQQAPVYENIDYYPQQSQPHPPYYHPIESRK
SPKSSPRTSLVGDSYEGSYRKAQPQVPTGNRYQSTSPAKELPPYEAPPVYENIQEVHFSENKPGPQVPTNYYHPANINGG
DYVVMTGKVGQSQSQRGIPQNLSYTQQRSGSMRGQSYDSSNLQRSIDSSTSRYLQGTSSVSSSDHQAGRSAYVPPSELQP
NRNFNYSADQQQQQQQQQQQQQQQQQQQQQSPRTALPYHSESPPIRLPPESHHYRGSLENTMSGQQGFRAASQVDNSQLS
QFRQDNPQNYKQYVEPSSRSANTNFSGDSQARNSPVYGIRPGEPTACRNSPCYSPNRAMPQNERNYHHQENRSDFPVRNS
PVYSSNRSAEHLRLGMLQQNDRSYMSDATDPTATRSSPLYSPSRDLTRSIIANNNAVRESPKTSPTHGQISSDLVSQNML
NSPRHGPPLSSNNSVGSPVRGQVQAAVTSASTTASESDVNTGPRITSLPPGVTSGVAGPVLLNAGVPVLQRSTDPEAEEK
KSVSPPIKPAPGKGLLPYNVISRPSGPTEAERKIEELTRQLEEEMEKQEEEGEYFGICHTCGEKVTGAGQACQAMGNLYH
TNCFICCSCGRALRGKAFYNVHGRVYCEEDYLYSGFQQTAEKCAICGHLIMEMILQAMGKSYHPGCFRCCVCNECLDGVP
FTVDVDNKIYCVNDYHRMFAPKCASCGKGITPVEGTEETVRVVSMDKDFHVDCYVCEDCGMQLTDEPDKRCYPLDGRLMC
RACHIQRISHTQPRAPQPVSASYQFMG
Swiss-ProtLIM domain-containing protein jub
KEGG     K16682  AJUBA, LIMD1, WTIP; LIM domain-containing protein     
SUPERFAMILYSSF57716  Glucocorticoid receptor-like (DNA-binding domain) superfamily     
Gene3DG3DSA:2.10.110.10     
PfamPF00412  LIM; LIM domain     
SMARTSM00132     
ProSiteProfilesPS50023  LIM_DOMAIN_2; LIM domain profile.     
CoilsCoil

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