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Gene detail [Fasta]

Species Linepithema humile
GeneLH22130
Positionscf7180001005018:2316701..2321289[GBrowse]
Ant Genomes Portalhttp://hymenopteragenome.org/cgi-bin/gb2/gbrowse/lhum_10/?name=LH22130
sequence mRNA: 
>LH22130-RA
ATGACTGCCATAGGCGACGTGCAAGCCTTGCAGACTCTCACAGTTTACACCAGCGATGTAAACAGCATCGATTTCGCCGG
TGATTGCGTGCTGGTGACGGGATCTGGGGACAAACGCGTTCGAGTTTGGGAATGGCAGCCCGGCACTGGCTACGTGGAGG
CTTACTTTTCGCCCCTGATGGGGCACAAGTACGGCGTGACTTCGGTCAAAGTCAGCCCCCAATCAACCATGTTAGCCACT
TCCAGCATAGACGGCACCACGCTGCTTTGGAACTTGCGCACGGGGACGAAGATACACACTATGGTGCAAGTGGGCGGCGA
AGCGGTGAGAGTCTGCAGGTTCTCGCCGGACTCGACGTTACTCGCGACCGCTGGAGATAACGGGCAAGTCTGCATTTGGG
ATTTGGTCCATCGCAATTTAATCAGGCAAGACATTTTACACAATGTATCTCCGTTCTTAAACAATTTAACGAAGAGTGTA
CGCAAATGTTTTCAAAAACACGAGGGCGCCGTGCAGAGCCTGTCCTTCTCGCCGGACTCCAACTGGCTGATTACATCCTG
CACATTGGGTGTCCTAAAGCTGTTCTCCACTGCCGACCTGATTGACAGTTGTACCTCCAGCAATCAGGATATCACCGAAC
TCGCCTCGATCGATGATGCTCACGATATGGGAGTGGTTTGCTGCGACTTCTCCACTTTCCAAGAAGTCACGTGCAACGAG
CCGTACACCAAGCTTTATCAGCTGGTTTCGTGCGGCAACGATCACGATGTAAAATTGTGGGAAGTCACGGTGAGCCAGAA
CAAGTGCGAGGCCCAACCCTCTACTGCCACTGTAGAGCTTTGCAGAGTGATGGAAAAGCACAGTAGTGCCTTAACTTGCG
TCCGTTTCAGCAGCAACGGATTATATATCGCCAGCTGTGGCCTCGACAAAACGGCAGTAATTTGGGAGACGAGCTCAGGA
AAGGTTGTAACGATAATCTCTGGCCACAATAGATATGTCGCTTGCTGCGCCTTCTCGCGCGACGGAAGTTTATTAGCGAC
AGGTTCGAACGATAAGTCAACGATCGTGTGGGATTTGGCGGGCAATCTAACTGTCGATTCGGAACTTTCCAGAAACTTTG
GTACAAAGTGGTTCGTGAATGATCCTGAAAAGAGCACTATGCACGAACAGGATGTGATGAGGAACGTCGAAACGTATGCT
AACGAAGTGAAATTGATCCAAAGACTGGAGGAACACAGCGGGGCGGTGAACAGCGTTGCCTTCCATGGAAATAATTTTCT
AGCCTCGGCATCGGGTGACAAACTAGTGCGCATGTGGAGCGTGGAGACGGAAGAGGAAGATGGTGAAGAGGTGATTAAAA
TACACGAGAAACCATTCAGTCCGCTTGACGCTCACACCTACAGCGTCAATTACGTGGAATTCAGTCCGTGCGGTTCGATG
CTCGCCTCCTGTTCTCTTGATGGGACGACTTTGGTTTGGAACACAGAAAACGGTGGACAAGCAAAATCCTCTTTTGTCAA
TTCTGGAACGGGCATCCGCGTATGCCGGTGGACACCGGACGGCGCAAAAATTGCCACTGCTGGTGACGACGAGAAGACCA
CATTGTGGGATGTGGAATCTATGGATCAATTACAGTATTTCCTATATTTACTTAATAATCTTAGAGAATATTACAGCGTT
TTCGAGGGCCACTCCGACGCGATAACGGCCATCGCGTTTACGCACGATTCCCGCTATCTTGTAACCGCCTGCAACGAGGG
CACCTGGCGCCTGTTTGACACTCTAGACGAAAAGAGCGAAGAAGCATTGCTGGTTTGCGAAGCGAGTCACGATCTTGGTG
TCCAGGGATGCGATTTCAGCCCTACTCCAGGCTCCTTAATGTGCACAAGAGACACAGAGATGAATGTCGACGAGCAGGTA
TATCTATTGGCAACGTGCGGCAACGACTCGTTGGTTAAATTATGGCACATAATAATTTCGAACAAATCACTATCCGATTC
GGACAGCATCGGATCGAGTGATGTCAGAACGCGTTACAAGGAAAAGAAGTCCTTAGCCGGGCATGGTGGGAACGTGATGT
GCGTCCGCTTCTCACCTATTCACGGAGAAGTTCTAGGTAGCGTCGCGACGGACAGAACAGCTCGCATATGGAGCGTGTTT
TCTGGAAGCTGTCTATATGTCATGGAGGATCACGACAGTCTCGTCACGTCTTGCGCATTTTCCGAGGACACGTCTCTCTT
CGCGACAGGCGCTTTGGACAAGACTGTTTTGGTTTGGAAAGTGCCTCAGCAACTTGTGTCACAAAGCAATTTAATGGACA
GCTTGAGGAACAAAAAGAAGAGGGTTGCAGATTGGAAGATGCATGACACATTGAAATGGCTGAACGATATTGAACTATCC
AGACTAATCAGGAAAGCGCTTCCTCTGGGACTGACCGGACGACATTTGCTATCCATATCAGAAAATGAGTTGATATCCCG
GCTAGAAATCGAAGATGACGAAGAGGCGGCGGAGATACTGAAAAAGCAATTATATTGGCTCAAGCGCGAAGATTGTAATA
TTACAGAGAATATAGACGAGTCGGAGATTCCTCATGAATTCTTGTGTCCTATAACGCACGAGATAATGAAAGAACCTGTG
CAGTGCTCAGATGGATTTACTTATGAAAGGGCAGCTATAAACGAATGGTTCCTGTGCGGAAAGTACACCAGCCCGATGAC
GAATGAGCCGCTGCACGACACTTCCTTTACTCCGAATTTCGTTCTTAGAAATGCTATACTCACTCTACTTTATGGAGAAG
GACCACAATAG
PEP: 
>LH22130-PA
MTAIGDVQALQTLTVYTSDVNSIDFAGDCVLVTGSGDKRVRVWEWQPGTGYVEAYFSPLMGHKYGVTSVKVSPQSTMLAT
SSIDGTTLLWNLRTGTKIHTMVQVGGEAVRVCRFSPDSTLLATAGDNGQVCIWDLVHRNLIRQDILHNVSPFLNNLTKSV
RKCFQKHEGAVQSLSFSPDSNWLITSCTLGVLKLFSTADLIDSCTSSNQDITELASIDDAHDMGVVCCDFSTFQEVTCNE
PYTKLYQLVSCGNDHDVKLWEVTVSQNKCEAQPSTATVELCRVMEKHSSALTCVRFSSNGLYIASCGLDKTAVIWETSSG
KVVTIISGHNRYVACCAFSRDGSLLATGSNDKSTIVWDLAGNLTVDSELSRNFGTKWFVNDPEKSTMHEQDVMRNVETYA
NEVKLIQRLEEHSGAVNSVAFHGNNFLASASGDKLVRMWSVETEEEDGEEVIKIHEKPFSPLDAHTYSVNYVEFSPCGSM
LASCSLDGTTLVWNTENGGQAKSSFVNSGTGIRVCRWTPDGAKIATAGDDEKTTLWDVESMDQLQYFLYLLNNLREYYSV
FEGHSDAITAIAFTHDSRYLVTACNEGTWRLFDTLDEKSEEALLVCEASHDLGVQGCDFSPTPGSLMCTRDTEMNVDEQV
YLLATCGNDSLVKLWHIIISNKSLSDSDSIGSSDVRTRYKEKKSLAGHGGNVMCVRFSPIHGEVLGSVATDRTARIWSVF
SGSCLYVMEDHDSLVTSCAFSEDTSLFATGALDKTVLVWKVPQQLVSQSNLMDSLRNKKKRVADWKMHDTLKWLNDIELS
RLIRKALPLGLTGRHLLSISENELISRLEIEDDEEAAEILKKQLYWLKREDCNITENIDESEIPHEFLCPITHEIMKEPV
QCSDGFTYERAAINEWFLCGKYTSPMTNEPLHDTSFTPNFVLRNAILTLLYGEGPQ
Swiss-ProtWD repeat, SAM and U-box domain-containing protein 1
SUPERFAMILYSSF57850  RING/U-box superfamily     
Gene3DG3DSA:3.30.40.10     
PfamPF04564  U-box; U-box domain     
SMARTSM00320     
ProSiteProfilesPS50294  WD_REPEATS_REGION; Trp-Asp (WD) repeats circular profile.     
PRINTSPR00320     
ProSitePatternsPS00678  WD_REPEATS_1; Trp-Asp (WD) repeats signature.     

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