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Gene detail [Fasta]

Species Linepithema humile
GeneLH12756
Positionscf7180001004639:4858..12151[GBrowse]
Ant Genomes Portalhttp://hymenopteragenome.org/cgi-bin/gb2/gbrowse/lhum_10/?name=LH12756
sequence mRNA: 
>LH12756-RA
ATGGCAGATGCATTGCAAAAACGATACAGAGATTATCGTGGTAAGAAGCGTGGTACGTTTCGTGCAATGGTACGTAAAGC
TTATGACGAACTCACAGAGATATTCTCAAGGAAACCTACGACACGTGAATGTGCTGCATACGACGATGATGATTTTGAGG
ATGTTGATGTCGAATTAGATTCACAACGTACTTCAATAGGTGATATGTTATTACATATGTATAATAAGTCGTCATACACA
CAGAATGGAAATTCGAGCGATAAGGAATTGATAGATATCAGTAGCGACGATGATGTGTCAAAGATGGAATCTAAAATTGA
AAAGAATGTAAAAGCATCTGAGCCTGTGTGTAATGTTAATGAAGATTCTTTGCACACATCTGCAACAGTTATTTCAAAAG
CAGAAATAGCTATCTCACAATCAGCAATATCTATTCCAAAGCCAGAAACATCCGTTACAAAGCCAGAAACATCGATTACA
AAGCCAGAAACACTTGCGATAAAGTCAGAATTACCTGTAAAATCCAAAAACCTTGTGAACGAGGTCATAAAACAACCATT
AATAGAATCTGCAAGAAAACGACAAAGGGACAAAGAAAATGACAGTGGACAGTTTTCAATTGCGAAAAAAGCAAAATCTA
TACCTGTCACAGAACCGAAAGTTACATTTTCCGATGTAGGTGGTAGTGACAAAATCTTGAGAACTGTCTGCAAGTTACTA
GCCCATATAAAACATCCTGAAATTTTTAAACAGCTTGGTATATCTCCGCCAAGAGGATTTTTACTTCATGGGCCTCCCGG
ATGTGGAAAGACATTACTAGCACATGCAGTTGCAGGAGAATTAAACATACCTCTACTAAAAGTAGCAGGGCCTGAGCTTG
TGGCAGGAGTATCTGGTGAAAGTGAAGCTCGTATTAGAGAATTGGTTGAGCAAGCTTTAAGTCTTGCACCATGCATCATT
TTCATAGATGAAATAGATGCTGTTGCACCACATAGAGCTACAGCTCAAAGAGAGATGGAAAGAAGAATTGTTGCACAATT
ATTGTCAAGCTTAGATGAATTAAATTTCAAAGAAAATGGAGACAGAGTACTGGTGATTGGTGCGACAAATCGACCTGATT
CATTAGATCCTGCTTTAAGAAGAGCGGGACGTTTTGATCGTGAAGTATGCCTTGGCATACCAGACAGAGAGGCGAGGGCT
AGAATCTTAGCAGTGCATACTGAAAAAGTTGTATTAGCTCCTAATGTTAGTTTGTCGACAATAGCTTCCCTCACTCCAGG
TTTTGTAGGTGCAGATTTGGTTGCCTTAATTAGAGAAGCTGCCATGGCTGCTGTAGATAGAATATTTGAGGATTTAAATA
GATCAAGGCAGGAACAAAAATTACCCGAAATATCATCCGAAATCGATAAGAAATCTAACAAGGAAACTCATACTTCCAAA
GATTCGGGAAATTTAATTAATCAAAATACCAGTGTTCCTACGACAGAAGTTCCTACTACTACGGTACAAAATGATACCGC
GTTCCTAAGAGATGTATCCAAAACTCCTGTAACTTTGGATAATACTGAAATGGACATAATACAGGAACACTCATCGGATT
TGTCAAGCTTATTGGGTTGGTTACACAGCGAGCTTTCCCTTTCCGCAAAACATCTATCAACCTTGTGTATTGAGCATAGT
GATTTTGAGATTGCTTTACGCGTTGTTCAACCTTCAGCGAAAAGAGAAGGATTTGCAACAGTTCCTGATGTAACCTGGGA
CGATGTTGGCTCATTGCAAGATGTACGACAGGAACTGCAAATGGCGATTCTCGCTCCCATTAAGCACTCTGAACAATTTA
ATGCATTAGGTTTAACTGCTGCTAGTGGAGTATTGTTATGTGGTCCACCCGGATGTGGAAAAACTTTGCTTGCCAAAGCT
ATTGCTAATGAAGCTGGGATTAATTTTATTTCCGTTAAAGGACCTGAACTTTTAAATATGTATGTTGGCGAAAGTGAGAA
AGCAGTTCGTCAATGTTTCTTAAGAGCAAGAAATTCGGCACCGTGCGTCATATTCTTTGATGAATTAGATGCATTATGTC
CTAAAAGAACAGAAGGTGATCATTCTGCAACATCACGTGTCGTTAATCAAATGCTTACAGAAATGGATGGTGTCGAGGAT
CGACAAGGTGTATTTCTTATGGCCGCTAGTAATCGCCCTGACATAATAGATCCAGCTGTTTTGAGACCAGGAAGACTCGA
CAAAATTTTATACGTTGGTTTCCCAACAGCTTCAGATAGAGTCGATATTTTACGTGCATTAACAAAAAATGCAACAAAAC
CAAAACTTGCATCAGACGTTAATTTGGAGCAAGTGGGATATCACGACAAGTGTCAAGGTTATACTGGAGCAGATTTAGCA
GCTTTGATAAGAGAAGCTGGTATGGAAGCGTTGAAGGAGATAATAGCCGGTTATGGACACTCAGAAATTTCTATGCGGCA
CATCTTTCGAGCATTCGATAAAATACAACCGTCTGTTCGCGAGAAGGCAATTAAGAAGAGTTCTGAGATTACACCAATGG
AAACACCAATAGAAACACCAATAGATGCACCAATTGTTGATCTAGGTACACGTTACCAAATTTTCCCTTACCCAGAGGTC
GGCCAATATCAAAATCTGTCAATACCCATGTCTTCTGTCTTTGATTTTCCTTACTTGGATTACTTGCAGCTGCATTAG
PEP: 
>LH12756-PA
MADALQKRYRDYRGKKRGTFRAMVRKAYDELTEIFSRKPTTRECAAYDDDDFEDVDVELDSQRTSIGDMLLHMYNKSSYT
QNGNSSDKELIDISSDDDVSKMESKIEKNVKASEPVCNVNEDSLHTSATVISKAEIAISQSAISIPKPETSVTKPETSIT
KPETLAIKSELPVKSKNLVNEVIKQPLIESARKRQRDKENDSGQFSIAKKAKSIPVTEPKVTFSDVGGSDKILRTVCKLL
AHIKHPEIFKQLGISPPRGFLLHGPPGCGKTLLAHAVAGELNIPLLKVAGPELVAGVSGESEARIRELVEQALSLAPCII
FIDEIDAVAPHRATAQREMERRIVAQLLSSLDELNFKENGDRVLVIGATNRPDSLDPALRRAGRFDREVCLGIPDREARA
RILAVHTEKVVLAPNVSLSTIASLTPGFVGADLVALIREAAMAAVDRIFEDLNRSRQEQKLPEISSEIDKKSNKETHTSK
DSGNLINQNTSVPTTEVPTTTVQNDTAFLRDVSKTPVTLDNTEMDIIQEHSSDLSSLLGWLHSELSLSAKHLSTLCIEHS
DFEIALRVVQPSAKREGFATVPDVTWDDVGSLQDVRQELQMAILAPIKHSEQFNALGLTAASGVLLCGPPGCGKTLLAKA
IANEAGINFISVKGPELLNMYVGESEKAVRQCFLRARNSAPCVIFFDELDALCPKRTEGDHSATSRVVNQMLTEMDGVED
RQGVFLMAASNRPDIIDPAVLRPGRLDKILYVGFPTASDRVDILRALTKNATKPKLASDVNLEQVGYHDKCQGYTGADLA
ALIREAGMEALKEIIAGYGHSEISMRHIFRAFDKIQPSVREKAIKKSSEITPMETPIETPIDAPIVDLGTRYQIFPYPEV
GQYQNLSIPMSSVFDFPYLDYLQLH
Swiss-ProtNuclear valosin-containing protein-like
KEGG     K14571  RIX7, NVL; ribosome biogenesis ATPase     
SUPERFAMILYSSF52540  P-loop containing nucleoside triphosphate hydrolases superfamily     
Gene3DG3DSA:1.10.8.60     
PfamPF00004  AAA; ATPase family associated with various cellular activities (AAA)     
SMARTSM00382     
ProSitePatternsPS00674  AAA; AAA-protein family signature.     

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