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Gene detail [Fasta]

Species Linepithema humile
GeneLH11612
Positionscf7180001004507:7998..12164[GBrowse]
Ant Genomes Portalhttp://hymenopteragenome.org/cgi-bin/gb2/gbrowse/lhum_10/?name=LH11612
sequence mRNA: 
>LH11612-RA
ATGATATCCGTGTGCCTAAATCTTGTCTGTGGTTTCGGATTGTTGCTCTGGAAAGAGGAGGTCGACGAAATCGAACTTTT
CATGCCGGTCGGTTCTATATTTCGCAAAGATGCCGTCTGGGTAAAGGAGCACTTCCGAGACGATCTCAGACACGAAAGTA
TCCTCGTCACTGCCACCAATGTGCTGGATCCTAAAGTGCTACGATCGATAAGAGACATCGAAAAAGATGTGAAGAGTATA
GTGGTGAATAATAATTCCTGGGAAGATGTGTGTGCAGGACCTTTTACATGGTTCCAAGAAAATGACAAATGGGAAACGAT
GAATAAAACCGAGTTTCCCGAGGAATATCTACCAATTATAAATAATACAATGATGAAGGAACCTTGTGTCCAAAAATCAC
TTCTAAAACTATGGCAAAAAGACGGTGGAAAAGATATTGATAACTTGACAAAATTAGAGATACTAGAGGACATAACTGCA
ACTATGCAACATACGAATACTAAAGATATACTTTCCGACATTGCGCCGTTGCTGGCGGGCATCGAGTACGAGGAGAATGG
ACAGGTGACGAGTGCAAAAGCGACGATTTTGTACTGGGTGCTGAAGAAGTCCAATCCGCACTCGCCGGAATGGGAAGTGG
AATTCATCAATAGGGTACTACATTCGAATCGTACTCTTCCGACGGGTATGGAGATCTATGCGATCACGTTACGTAGTTAC
GACGATATGTTGCACGAGGTGGTCAATAGCAATATGACCGTGCTTTTCTGTGGCATGTCGCTGATCTCGATCTACGTGAT
CGTGATGATCAGTCGTTGCAACGCGATGCAACAGCGGATATATCTGTCCCTGATGGGGATCTGCGTGGTCGGCCAGGCTC
TTCTGTCGTCCTACGGGCTGTGCTTCTACATGGGATTTATGTACGGGCCGGTGCATCCGATCCTACCATTCCTGCTACTC
GGCATTGGTGTCGACGACATGTTCGTCATTATGCAGAGCCTCGAGACCATGTCTGAGGCGGACAAGACTCTAGACATTCC
TGCTCGCATCGCGAAGTCCATTCAAGTGTCAGGTATGTCCATCACTGTGACATCATTCACTAACATGGTGGCTTTCGCCA
TTGGCATGACGACGGTGATGCCGTTCCTGAAATCTTTTTGTATGTTTGCCGCGATGGGTATATTGTTCCTCTATATCTAC
GAGATCATGTTCTTCGTTAGTTGTCTGGTGTTCGACGAGAGGCGACTGGCAGCGAAGAGGGACGGTTGCTGCTGCCAGCC
GCGTCCCAATTGGCGACCAAACCAGTGCAGCAAGCAGAACTTCCAGCGATTTGTCTTTGAGAAGTACATCGGACCTTTTG
TTTTAAGGACGTCAATGAAAAGAATCATTCTGCTGCTTACCGCAGCCCTGCTGTGCATCAACATCTGGGCCATATTTCAG
CTGCAACAGAACTTTGATGCGCTCATGTACTTGAATCAGGAATCTTACCCAATACAGTTTAACAACAAACTGATGAAATA
CTTTCCAAGATACGGCAAGAACGTCAATATATATCTGACGGGCGTGGATTATTATGAGGATCGCGAAGCGCTGTTTCAAC
TAGTGGAGAATCTCAGACGGGACCCGTACGTCAATAATCACACTCTCGACCCATGGTTCGTAGCGTATGAGAAGTGGTTG
AACATCACTGGTAAAGCGCAATACATCGAGAATAAAGACGAGTATTACAATATGCTCACGGAATATCTATTATTCACGGT
GAAAGGACAATCGTACATTCAGGATCTGAAATTCAGTAAATTACCGTTTAACGACTACAACATCACAATTCCAGTACAAC
ACATTCCTATCAGCACAACGTCCGATCAGATAAGAGCTATGCAAGCAATCAGAGATGCCGTGAAATCGGTGAACTTCACT
CACGGGCACGATTACATTGCAATTCACTCGACAGATTTAATAAGATGGGCGACAAATAAGATAATTGGCGAAGAACTAAT
TAGGAACTTGAGTCTGGAGATACTGGCGGTAGGAATGGTAACATTGGTATTTCTTAGGAATCTAATCGCGTCATTTTGGG
TGATGTGTTGCGTATTGTTCACACTCATCAATCTTTTGGGCTCCATGTACTTTCTAGGATTGACTGTAGAAATTTCATCA
AGTATTACAATTTTATTGTGCGCCGGATTGGCGGTCGATTACGCCGCGCACATCGGATTGGAATTTATACGTTCGAGCGG
CAGTAAACAAGAACGAGCACTGACAACATTCAGCGTTATTGGACCAGCAGTATTGAATGGTGGTTTGAGCACATTTCTTG
CCTTTGTCCTGCTAGGCTTTAGCCGGGCTTATCTTTTTACGACATTCTTTAAGCTATTTACATCCGTAGTATTATTTGGT
TTGTTTCACGGATTGTTGTTTCTGCCGGTAATATTGAGTTTAGCGGGACCTGGCGAGAGAAAATCAAAAAGCAAGCAAAA
GAATCAAATTATGTAATATCAGAACGGCTATTATAGTGTTTATCAAAATGGAAAA
PEP: 
>LH11612-PA
MISVCLNLVCGFGLLLWKEEVDEIELFMPVGSIFRKDAVWVKEHFRDDLRHESILVTATNVLDPKVLRSIRDIEKDVKSI
VVNNNSWEDVCAGPFTWFQENDKWETMNKTEFPEEYLPIINNTMMKEPCVQKSLLKLWQKDGGKDIDNLTKLEILEDITA
TMQHTNTKDILSDIAPLLAGIEYEENGQVTSAKATILYWVLKKSNPHSPEWEVEFINRVLHSNRTLPTGMEIYAITLRSY
DDMLHEVVNSNMTVLFCGMSLISIYVIVMISRCNAMQQRIYLSLMGICVVGQALLSSYGLCFYMGFMYGPVHPILPFLLL
GIGVDDMFVIMQSLETMSEADKTLDIPARIAKSIQVSGMSITVTSFTNMVAFAIGMTTVMPFLKSFCMFAAMGILFLYIY
EIMFFVSCLVFDERRLAAKRDGCCCQPRPNWRPNQCSKQNFQRFVFEKYIGPFVLRTSMKRIILLLTAALLCINIWAIFQ
LQQNFDALMYLNQESYPIQFNNKLMKYFPRYGKNVNIYLTGVDYYEDREALFQLVENLRRDPYVNNHTLDPWFVAYEKWL
NITGKAQYIENKDEYYNMLTEYLLFTVKGQSYIQDLKFSKLPFNDYNITIPVQHIPISTTSDQIRAMQAIRDAVKSVNFT
HGHDYIAIHSTDLIRWATNKIIGEELIRNLSLEILAVGMVTLVFLRNLIASFWVMCCVLFTLINLLGSMYFLGLTVEISS
SITILLCAGLAVDYAAHIGLEFIRSSGSKQERALTTFSVIGPAVLNGGLSTFLAFVLLGFSRAYLFTTFFKLFTSVVLFG
LFHGLLFLPVILSLAGPGERKSKSKQKNQIM
Swiss-ProtPatched domain-containing protein 3
SUPERFAMILYSSF82866  Multidrug efflux transporter AcrB transmembrane domain superfamily     
Gene3DG3DSA:1.20.1640.10     
PfamPF02460  Patched; Patched family     
ProSiteProfilesPS50156  SSD; Sterol-sensing domain (SSD) profile.     

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