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Gene detail [Fasta]

Species Linepithema humile
GeneLH16820
Positionscf7180001004924:571914..574778[GBrowse]
Ant Genomes Portalhttp://hymenopteragenome.org/cgi-bin/gb2/gbrowse/lhum_10/?name=LH16820
sequence mRNA: 
>LH16820-RA
ATGGCCGATGGACGCGAGTCACGGTCGTTTTCCCCGAAGAATCTATACGTGTTGTGCGTGTCCGCGATAGCGGGCAAGTA
TCAAAGTTACAAACCGCATCTCGCCGACTTACCAAAGAACGTGCGGTTCGATCTCTACTATCAGTTGTACAAAGACAAGA
AATTATGTATATTGGGGGCGGAATTAAGCGATCTGGAGACTTTCTCCAAGATGCTCAAGGTCACCAATCGTCGAATACAC
CTTTTGCAAATCTTCCAGGCTCCGATGGAACATGGAGTAAAAGTAGGACAACATTTGGCCATCAGTTACAATATGCAATG
TTTAGAAGTGAGAGAGAATCCTGCTGTACAGGATAAAACTATAAATCTGGGTTTGAGACTCGGTGGATTTCTCAGTGACG
CCGGTTGGCATTCCAACAGTGAAGAAGTACTGTTAGCTTGCAAAGAATTATGTATTGCCAACAATCAGACCCCTCAGGAT
TGGTGTAGAACGTTAGATTGTTGTCACAAACTATTACATGCACAAGCAGCTTACTGTGCTTTTGACGGGGCTGCAGAAAC
TCACCAACTTGCCATAGAAATGATAACAAAATTAAAAAATGCACAATACAGTGACAGTAATCACGCTGCACTTTTCGCGG
AATTCAGTATACTGTTCTTTATACGCAGTGAATACGATCAAGCTTACAGATGGAGTATAGAAGCATTAAAACATTTAAAA
CCATCACTTCCTGCACGGGTTATCATCGACGTTCTACGACAGGCAGCAAAATCGTGTGTGGTAAAACGCGAATTCCAGAA
GGCTGGTTTGTTAATCAGAGAAGCAGTATATCTAGCGAGGGAAATATTCGATACAGATCATCCAAAATACAGTGACGTTC
TTATCGATTATGGATTCTACTTACTAAATTACGATAGCATCATCAATAGTGTATCCATCTATAAGACTGCATTAGATATT
AGAAGAGTGATTTTCGGCAAGATTAATCTTCACGTTGCTTTGGCACACGAAGACTTGGCTTATGCTCTCTATGTGTACGA
ATATAGTTCCGGCAAATTCGACGAAGCCAGCGATAACGCTGGAATAGCTATAGACATTATGGAAAAACTTTTACCCACAA
ATCATTTGATGCTCGCGAGTGCTAAGAGAGTAAAGGCGCTTATTCTCGAAGAGATTGCCATAGATAATGCGTCCACGCCT
ATGTCCGAACAAAACCTGTTACTCAAATCTGAGTGTCTTCACCTGTCCGCGTTGCAATTGGCGAAGACTGCGTTCGGTGA
AAGAAACGTACAAACGGCGAAACATTATGGAAATTTGGGTCGCTTGTATCAGAGTATGAGAAAGTTTCAGGAAGCAGAAG
CAATGCACTTGAAAGCTATTCGTATCAAAGAAGAACTGCTGGGTCCTGATGATTACGAAGTGGGCTTAAGTATAGGGCAT
TTAGCATCATTGTACAATTTCCACATGAACCGGTACAGAGATGCTGAGAAGCTTTATTACCGTAGTATCGCAATCAGTTT
GAAGTTATTTGGAAAGAGTTACAGTGGTTTAGAATACGATTATCGAGGACTTTTACATGTGTACAGTAAATTAGACGAGT
ATCAGAAGATATTGGAATACACAGACACGTTAAATCATTGGAAAGAACTTAGAGACAAACATGCTCAATCCGAAGATCCA
CCGATCGACATACAGAAACGTCCGCAACCAATCGCAAACATTATTAATGTGTTCTTTTCCATGTGA
PEP: 
>LH16820-PA
MADGRESRSFSPKNLYVLCVSAIAGKYQSYKPHLADLPKNVRFDLYYQLYKDKKLCILGAELSDLETFSKMLKVTNRRIH
LLQIFQAPMEHGVKVGQHLAISYNMQCLEVRENPAVQDKTINLGLRLGGFLSDAGWHSNSEEVLLACKELCIANNQTPQD
WCRTLDCCHKLLHAQAAYCAFDGAAETHQLAIEMITKLKNAQYSDSNHAALFAEFSILFFIRSEYDQAYRWSIEALKHLK
PSLPARVIIDVLRQAAKSCVVKREFQKAGLLIREAVYLAREIFDTDHPKYSDVLIDYGFYLLNYDSIINSVSIYKTALDI
RRVIFGKINLHVALAHEDLAYALYVYEYSSGKFDEASDNAGIAIDIMEKLLPTNHLMLASAKRVKALILEEIAIDNASTP
MSEQNLLLKSECLHLSALQLAKTAFGERNVQTAKHYGNLGRLYQSMRKFQEAEAMHLKAIRIKEELLGPDDYEVGLSIGH
LASLYNFHMNRYRDAEKLYYRSIAISLKLFGKSYSGLEYDYRGLLHVYSKLDEYQKILEYTDTLNHWKELRDKHAQSEDP
PIDIQKRPQPIANIINVFFSM
Swiss-ProtAmyloid protein-binding protein 2
SUPERFAMILYSSF48452  TPR-like superfamily     
Gene3DG3DSA:1.25.40.10     
PfamPF13374  TPR_10; Tetratricopeptide repeat     
SMARTSM00028     
ProSiteProfilesPS50293  TPR_REGION; TPR repeat region circular profile.     

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