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Gene detail [Fasta]

Species Linepithema humile
GeneLH16863
Positionscf7180001004924:859068..873810[GBrowse]
Ant Genomes Portalhttp://hymenopteragenome.org/cgi-bin/gb2/gbrowse/lhum_10/?name=LH16863
sequence mRNA:
>LH16863-RA
GAGGGCCGGGGAGAAGTGACAGACATCAGCGCAAGTCCTGGGAGGCAAGCACCTGCCAACCAGTTGCGCCCCAAGGAACC
ACCCCCCATGGTCATTCAAGGAGACTTCAGGAAGACGAATTTAACGTGCTCGTTGCGCCGGCAAGCTTCAATTGGCGGAC
AGTACGACGATGGATCCCGAAACTCCGCGGGACTCTATTGTATCGCTCGTGAAGCTGTCTCGACGAACGGCAGAAACGTG
AGCGGGATCAGTACAGAGATCTTCAAGCAGATCGAGACTGTCGAAAACGATCATGACGCTTCGACAGCGGCGGCCCTCGA
AGCTGTCGAGCGGAGAGGCGAGATGGTCGTGCGTGTCATCGAGCCTCGGCAAATGGGTAGACAGGCTTCCGAGGCGGCGA
AAAAATTTATCGCTATGCAGGATCCCAAGCACCCCATTCACTTCATCGAGATAATCAAACGACCGGGACAGACCCTCGGC
CTCTACATACGCGAGGGCAACGGCGTCAACAGGAACGACGGGGTCTTTATCTCCAGGATAGCCCTGGAGACCGCCGTCTA
CAACAGCGGCTGCTTGAAGGTGAGAATCGCGCCAACTACCGTCGAACGTAAATTCACCGCCCACCCGCGGTCGCCGGCGC
GGAAACTGACACGTGAGCGAGGAAAACCGAGGCGAGAACACAGCCGGGAGAATCGAGATCGCTTTCGTCGCGCGAATCCG
CCTTCTTTTTGTCAAGCTGAAAACTTAATTGCCACCCCGGTGCAGCCATTTAGAACCGGAACCTATTTCAAGACGCCGCG
ACGGCGGTGGCGGCGCGAAGAGAGAAGGGGGGAACGCCGCCAGCGGGAGGGGCACGGTTTCGCAAGAACGCGCCGAATTA
AATTTATCCTTTTGCACCTTGACATTTCGCGCGAGTCGACCATCGATCGGTCCCGCATTCGGCGATCCAAGTACGGGAGG
GAGAAACGAGGAGTTTCATCCTCCCGTAGCCACCCGCCGCGGCTATTATTCATTATTGTCTTTATCAGTCATCCGCGAGC
GATGTATTCGATGGATGTTCAGGTGGGCGACGAGATCCTCGCGGTGAATCTGGTCGACGTGACACATATGAGCCTGGACG
ATGTCGTGATCATCATGTCGATACCGCGACGGCTCGTCCTGGCTACGCGACACGGACCGCATCAGCCGATCTCGCACAGC
CACCAGACCGAGCACAAGGCGCCGCCCGTGGTGGTCATCAAGCGGGAGCTGAACGAGGACGAGAACGACCACGCGACGAG
TAACCACGTCAGCCTATATAAAGACAGAATTTTTACAAACAGAGATGGCAGCAGCCGTAGACGGGGCGACGGGCGCGAGA
TGTTGCCGTCGCGATCGCGACTCGGTCTCACGGGTTTGGGATCGAACCAGGATCTCGGATCGAGCAATGGCGATCTGTAC
TACAATTCACGGCCAGAGGGTCACTGGTCATATCAACCGCCACCGCCGCCGGTTATCACGCACCAGCCGAAACCATCGTC
GACTCAACACTTTCAGCCGTACGAGCGCGGTTACCCGAAGACATTGGAGAGCTTAGCTGAGAAAGTACACCCTTTCTACA
CGGGGCCCATGATGCCTTCGTCGAACGGCGGCCGGCGTATGTCGACGGGCGCCGGGATGCAATCAGTCGGCGGCAGATTG
TCGGGACAGACCGCGCAGTCGACCCATTACGGCGGCTACGGCCAGCACACCGGAAGCGGAAGGATCATGCCGAGAAGTGG
TTCCGACCAGCACCTACCACGAGTCGATTACACGAGTATCACGACGCCGACGCGACATACCCTTCTTAGATCCAGCTTGA
AATCAGCGTCCAAGCACATCCACCGCGAGGCTCTCAAGAGCGCAAGCAATTTCCGTCTCGACGGCAACTGTCCCTTTCTC
GTGCATCGCCATACACGCACCCAACCTAAACTCCACGGAATATCCTCACATGCTCTTCTCCGCGCAGGTACATCAGCATT
GCGTTATAACACGAGGTACGGACAGACTGATATATCGTCCGCCGTGCAGAGACAAGGACAATTCGGCACGTTGACGAGAC
GACACCGGCCGTCATTGGACTACGCCTCAGACACCGAGGCTACGTGCTCCAGCTCGCCAAAATCAGCGTATTACTATTAT
AGGCACAACATGAACAATCCACCTCAAAGTAGCGTCGTATCGCACTTAGCTACCCTTTCGAGGTCACAAATCGGTTTAAG
GTCAAACTCACTACCACGAAGCGGTCGGACGTTGCCCCAGCAGCCTGGTCTCAGGTCGGGTCTTAGCACGGTCGCGTCCG
GCCTGATCGATCAAGAGGACAGCGACGGCGCTCTATCGGCGCCGGAATTACCTTCCATCAGGCGTGACAGAGGCAGAATA
CCGTCCTCGCCGAGCGTATTTACATCGGACGAGTACCGCGCCTGGCTGAGCCGCACACCAAGTACCAGCGCTCTGTACGA
GCAGATCAGGGCGACCACAAGTAGACCACCCCGTTACACCTACAGTGCCGAGAATATTCACGCGGCTGTTAATCAGGGTG
ACTACGGCAGTTACGGCGGGTACAGACCGCTCTCGAGCACGCTCGATCGTCTGTCAACGAGATCGGCGTCGGTCCAGCAG
GTGAACCTCGCGAATCTCAGAGCGTCGACGGCGATCAGCTCGACGTGTCATCGCGGTACAACGAATCCAAGGCCCGCGTC
AGTGGCGTCTAGCGCGCGCTCGTCGCTAGCGGGTCAGAAACCTTCGTTGGCGAGCTCCGTGAGCCAACGTGCAATGTCGG
TCAGAAGAATTAGAAACCTGCTGGATCTGGAGTCCACGAGAAGCATACCTACCCCAACGCCTACCAGAACTCAGGGTCAA
ATACTGCTAGATATTAATCCTGCAGAGTTCCTCAAGTATAAAATAGAAAAGCCGCCGACCGTGGGCACTCCGAGCTCGAC
AAGTTCGCTTTTGAGCTCGCTTGGGGAGACAACCAGTGGCGATTTTGCGAGTGGAGTCAGTGGATTATTGTCGGTCCATC
TTTTAGCGGGACGTGGTCTTCGATCGACTACGACCTCATCGGCCGCCACTACACCTTCCACACCCTCGGGTCAACCAAAC
TTAGCTAGCTGCGGCTTGAGAGACTTGTACTGCGTGCTGGAGTGTGACAGGGTGCACAAAGCGCGCACCGTAGTGCGCAC
CGGCGACCTGATGTTCGACTGGGACGAAACCTTCGAGCTGGACCTCGTGGGCAATCGGCAGCTGGATCTGCTCGTTTACT
CTTGGGACCCACAGTACAGGCATAAACTCTGTTACAAGGGATCGGTGCACTTGGCGAGTCTGCTGAAAGAATCGCCGGTG
CACCAGCTGGCCGTCAAAGTCGAGCCACGTGGTACAATCTACTTGAAATTGCGATACACCGATGCCCAACAAACCTTCCG
CCGAAGAGGTCTGCCGGTCATATCTTTAGCTACAAGAGTGGCACCTCTTTTCGGAGTTGATTTAGACACAGTGGTAAGCC
GAGAGACCAAAACTGGCGGAGTTCCGGGCGGAGTTTCCACGGCTTTGGCGATGGGAATGCCGAACGTACCGATCATCGTG
TGGCGTTGCGTCGAAGAGGTGGAGAGAAGAGGACTCGATATTATCGGTAAGTATCCAACGATCTCGAAATGTGTACGCGC
GATAAGAACCATCATTATGTGGAATACACGTTTGTATAGACTCTGCGGTTCAGCGACTAAGAAGAGGATACTTAGGGAAG
CTTTCGAGAGAAATGCACGATCCGTAAATCTATCGCCCGACAACGTGCCGGATATCAATGTCATCACTGGCGTTCTAAAG
GATTATTTACGAGAACTTCCGGAACCTCTCTTCACGAAGTGCCTCTACCAAATGATGGTCGACGCACTGGCCGTCTGTTT
GCCGGACGACCCGCAGGGCAACGCTAAGCTTATGTTCAGTATATTAGATTGTCTGCCTAAAGTTAATAGGTGCACGTTGA
TTTATTTGCTGGATCACCTGGCGATGGTCGTCTCGCAGTGCAATAAAATGTCACCGACGAGCCTCGCTGTTTGCTTCGGT
CCAGTATTAATGTTACACTCGGAGGAAAGCGGACCCCCGCTGGATTTCCAGCAACCAATCGCCGTGCTTAAATATTTGCT
GGAGATTTGGCCAGTCAAGTCAGTAGCCGCAGTCCACGGGCCCTCCATTCGTCCTCCACCACCGGTCAAGCCTCGACAGA
AAGGAAGAGAAAGTTTAATGGAATTTTCCAAACGTCTGGTCAATTTCGTAAATAAATTTCACCGATGCCCGGCGTCGGGC
TGGACTAACCGACGACACCTTGACGGTGGGTCCCTTTTATTCGCGCAGGTGATAGTCTCGTCTCCCGGTTCACCTAGCAG
CGAGGAGTCAGAGGCCTCGCCGGAGCCGATTAACAAGGGCCTTCTGACCGGCCTGGGATTTGAGAAGAACGACGAGACGG
CGGCGACGACGACGACGACAACAACAACGACGACGACTACGGCCGGCAACGGCATCGTTGGCCACGCCGTCGAACAGATT
ACGCCGACGAGCAGCGTCGATACCGAGGAGGGCAACCTCCAGCATCCCGAGGAGGGCGAGAAGGGCGTCGAGGGTGATGT
CGAGGCGAGCGACGACGATCGACACCAGCGCATACCAAAAACGCACTAG
PEP:
>LH16863-PA
MVIQGDFRKTNLTCSLRRQASIGGQYDDGSRNSAGLYCIAREAVSTNGRNVSGISTEIFKQIETVENDHDASTAAALEAV
ERRGEMVVRVIEPRQMGRQASEAAKKFIAMQDPKHPIHFIEIIKRPGQTLGLYIREGNGVNRNDGVFISRIALETAVYNS
GCLKVRIAPTTVERKFTAHPRSPARKLTRERGKPRREHSRENRDRFRRANPPSFCQAENLIATPVQPFRTGTYFKTPRRR
WRREERRGERRQREGHGFARTRRIKFILLHLDISRESTIDRSRIRRSKYGREKRGVSSSRSHPPRLLFIIVFISHPRAMY
SMDVQVGDEILAVNLVDVTHMSLDDVVIIMSIPRRLVLATRHGPHQPISHSHQTEHKAPPVVVIKRELNEDENDHATSNH
VSLYKDRIFTNRDGSSRRRGDGREMLPSRSRLGLTGLGSNQDLGSSNGDLYYNSRPEGHWSYQPPPPPVITHQPKPSSTQ
HFQPYERGYPKTLESLAEKVHPFYTGPMMPSSNGGRRMSTGAGMQSVGGRLSGQTAQSTHYGGYGQHTGSGRIMPRSGSD
QHLPRVDYTSITTPTRHTLLRSSLKSASKHIHREALKSASNFRLDGNCPFLVHRHTRTQPKLHGISSHALLRAGTSALRY
NTRYGQTDISSAVQRQGQFGTLTRRHRPSLDYASDTEATCSSSPKSAYYYYRHNMNNPPQSSVVSHLATLSRSQIGLRSN
SLPRSGRTLPQQPGLRSGLSTVASGLIDQEDSDGALSAPELPSIRRDRGRIPSSPSVFTSDEYRAWLSRTPSTSALYEQI
RATTSRPPRYTYSAENIHAAVNQGDYGSYGGYRPLSSTLDRLSTRSASVQQVNLANLRASTAISSTCHRGTTNPRPASVA
SSARSSLAGQKPSLASSVSQRAMSVRRIRNLLDLESTRSIPTPTPTRTQGQILLDINPAEFLKYKIEKPPTVGTPSSTSS
LLSSLGETTSGDFASGVSGLLSVHLLAGRGLRSTTTSSAATTPSTPSGQPNLASCGLRDLYCVLECDRVHKARTVVRTGD
LMFDWDETFELDLVGNRQLDLLVYSWDPQYRHKLCYKGSVHLASLLKESPVHQLAVKVEPRGTIYLKLRYTDAQQTFRRR
GLPVISLATRVAPLFGVDLDTVVSRETKTGGVPGGVSTALAMGMPNVPIIVWRCVEEVERRGLDIIGKYPTISKCVRAIR
TIIMWNTRLYRLCGSATKKRILREAFERNARSVNLSPDNVPDINVITGVLKDYLRELPEPLFTKCLYQMMVDALAVCLPD
DPQGNAKLMFSILDCLPKVNRCTLIYLLDHLAMVVSQCNKMSPTSLAVCFGPVLMLHSEESGPPLDFQQPIAVLKYLLEI
WPVKSVAAVHGPSIRPPPPVKPRQKGRESLMEFSKRLVNFVNKFHRCPASGWTNRRHLDGGSLLFAQVIVSSPGSPSSEE
SEASPEPINKGLLTGLGFEKNDETAATTTTTTTTTTTTAGNGIVGHAVEQITPTSSVDTEEGNLQHPEEGEKGVEGDVEA
SDDDRHQRIPKTH
Swiss-ProtRho GTPase-activating protein 100F
SUPERFAMILYSSF49562  C2 domain (Calcium/lipid-binding domain, CaLB) superfamily     
Gene3DG3DSA:2.30.42.10     
PfamPF00620  RhoGAP; RhoGAP domain     
SMARTSM00324     
ProSiteProfilesPS50238  RHOGAP; Rho GTPase-activating proteins domain profile.     

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