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Gene detail [Fasta]

Species Linepithema humile
GeneLH16860
Positionscf7180001004924:818032..824542[GBrowse]
Ant Genomes Portalhttp://hymenopteragenome.org/cgi-bin/gb2/gbrowse/lhum_10/?name=LH16860
sequence mRNA: 
>LH16860-RA
ATGTCTGCAAACGCTCAATTTGCAAATCCGCCACCGGCTGTGAGTTTGCCCAACATGTCGGTGCCTCCGCCTGTTCCGAC
TCCAAATTTATCGACACCACCACCAAATTTAACAACCATAAACACATCAGGAAGTTATCAGCATCGATATGCGAATCACA
GAGAAGGCAATCGTGGTTTTTTTAAACCATTCAGACCTTATCATGCTCCAAAAGTTGTTGCTAGTGGGCAAGATATGTTA
CAAGATGAATTTGATGGAAAAAGACTCAGGAAGTCTGTCATGAGAAAGACCGTCGATTACAATTCCGCTATCATTAGAAG
TTTAGAACATCGAGTGTGGCAGCGGGACTACAGGGATCGTCGTGCCCTTCAACCAGATGTAATGTACTATCCTGATTTAC
TCCCCCCACCAAGTTATATTGACAATCCAATAAATGCAGTCACCACACGGTTCGTAAAAACGGCCACCAATAAAATGCGT
TGTCCGATTTTTTGTATGGCCTGGACACCAGAGGGTAGACGTCTCGTTACTGGCGCATCGAGTGGAGAATTCACCCTGTG
GAATGGCCTCACTTTCAATTTTGAAACTATTTTGCAGGCTCACGACAGCCCGGTAAGGACTATGGTATGGTCGCACAATG
AGAGCTGGATGGTAACGGGGGACCACGCCGGCTACGTGAAATATTGGCAGAGCAATATGAACAACGTCAAGATGTTTCAA
GCACACAAAGAAGCGATTAGAGGACTCAGGTATACCATCCACCACACTAGTCCTTACGTCTCTTGCGCCACTGTTGCCGA
TGATCCGTCAATCCTTGCCGTAGTTAGGATATTGGACGTGACTCTTATTCTCTTCCTTTTCTGGTTTTGTGCCGTTTCTG
GCAGAGCAATAGTGGTTCTTGTATGGGTACACAGTCCAACGGATCACAAATTGGCGACCTGTAGTGATGATGGAACCGTC
CGAATTTGGGATTTTCTTCGCTGTCATGAAGAACGAATTCTCAGGGGTCATGGTGCAGATGTGAAGTGCGTACACTGGCA
TCCACAAAAGAGTCTAGTCATTTCCGGAAGTAAAGACAATCAGCAGCCGGTGAAATTGTGGGATCCGAAGACCGGGCAGT
CTCTCGCGACTCTCCATGCTCACAAATCAACCGTAATGGACGTCAAATGGAATGAGAACGGCAATTGGTTGGTGACTGCC
TCGCGAGATCACTTATTGAAGCTGTTCGATCTCAGAAATTTGAGCCAAGAAGTCCAGACCTTCCGTGGTCATAAAAAAGA
GGCGTCCAGCGTTGCGTGGCATCCAAGTCACGAAGGTCTCTTTTGTAGTGGAGGTAGCGATGGTGCTATACTTTTCTGGC
ACGTGGGGGCCGATAAAGAAGTCGGAGCGATAGAGCAGGCACACGACAGCATAGTGTGGACGTTGGCCTGGCATCCATTA
GGCCACATTTTGTGCTCCGGCAGCAACGATCACACGTCCAAGTTTTGGACGCGCAACAGACCCGGAGATTTAATGAGAGA
TAAATACAATCTCAATACGTTACCGGCGGGCTCAGCTGGCATTGATGACCATGAAATCGCTGATGAAGCAGCGGTGATAC
CTGGTATGGGACCGGAGGACAGAATCAACGCCGACGGCGAATCCGAAGACAAAAGCGGCGGAATTCCGGGACTGGATTTG
GATCACGCCGTGGACGAGGGCAAGAAGTTTGCTAACAAAAAAGTCCCGTACAGCAAACCGATACCGCGCAACTTCCAAGC
TCAATGGAACGAAATGGAGGCTGAGGATAGCGAACAAGTCGAAGCGTTGAATGCATTTGTTAATCAATTGATAGAAACTA
CTCCGGGTGCTGTGCCATTGAACGAAGTTACGCCTAACGCTATTATATTATATGGGAAAATGATTCCCGTAGAAGCGGGC
TCCAAACTCGCGGAGGCGATCAGCAAAGGAACGGACGCCATAAATAAACTAGTATTTTCCGGTGAAATAGAAGAGCTACG
GGATGTAGTGGGTCCACCGGATAATGTGAACGAGGCTGAAGAGTATCTGCAGGACGATGGCGAAATCGATTATTCGAAAG
TGCCCGACGTGGATTTGCCACCGCCTTTGCCGAGCTCAAAATTTGCACAGAATCCGGAATTGCTGAAGTCACTAAATCGC
GGCGGCAAGCGTAAATTCGATCAGTTAATCGGCTGGAGCGACGGCGGGTCGAGTGATCGCACGTCTAAGATCCATCAACC
GGTCTTTGGCGGTGTGATCACCGAAGACTCGCAGTCCAGCGATACCGATCTGAGATTCAGCATCGGCAAGAATGCGGAGA
GTAATTCTTTCCATAGCGGCCAAGACGAGGATCACAGGAGAATAGGTTCTCACGGTGATATCGCGAGGAGCAGCAATCGC
GGCGACGAGGATCTGAGGTTCAACATATCCGCCGGACCTGGCAGGCCTGGTTCTCGTAACGAGTACGATCCGCGTGGCAA
CAGTTTTGCCGACAAAGACTTCCGCAGCATTAGTGGTTTCCCGAAGAAATCGATGGACAACGACGTATACGACGAGCGGG
AACGCGACGGCGCAGGCGGCCGCTGGGACGACGAGAAATCCAAGGGCGACGGACCGCGCGGCAAATCGGACGGCAACGGG
TTTGACAAGCGCGACAACGGTATGCCGATGGGTCCTGGCGGCATGGGCATAGGTCACATGCCCGGTGTGCCGCATCTACC
GAATCATCACAACATGCAGAACATCAATCCCAACATGCCTCCGTCGATACCGGGCCTGATGCCACATCCTAACATGCCGC
AGCATCCTGGTATGCAGGGCAAACCTCCTCCACCGCATCCTGGTATGCCGGGCATGGATGGCCCGATGTTGCCGCATATG
ATGCCGCATCATCCGGGAATGCATCCGGTCTTCGGGCCGAACGGTCCACCGCCCGGTGGCTTCGGACCGAACTTCCGGTT
GCCGCCACCGAACGGCAATTTCGGACCGAATCACTTCAGGCCGGGTCCGATGCCGCCGTTCGGACCGAATCAAGGCCCGC
CGCCATTCGGCAACAGTTTCCAAGGACCGCCCAATTTCCGCGGACCTAACGCCGGTCCGATGAACTTCGACCGGCCGGTC
TTCGGGCCGAACTTTCGCGGTCAGAATCCGCAGGGTCCACTGAACAACTTCAACGCGAACTTCGGTAACTTCGGCAAGAA
CGGACCCAACCGCGGCATGAGCCGCGGCGGTGGCGGCGGTGGCAGCGGCAGCGGAGGCGACAACAGAAGTGGTTACAGCA
ATCGCGGTAGAGGACGTGACAATGATCAGTCAAGAGGATCGAGAGGTAGGGACAATTATTGA
PEP: 
>LH16860-PA
MSANAQFANPPPAVSLPNMSVPPPVPTPNLSTPPPNLTTINTSGSYQHRYANHREGNRGFFKPFRPYHAPKVVASGQDML
QDEFDGKRLRKSVMRKTVDYNSAIIRSLEHRVWQRDYRDRRALQPDVMYYPDLLPPPSYIDNPINAVTTRFVKTATNKMR
CPIFCMAWTPEGRRLVTGASSGEFTLWNGLTFNFETILQAHDSPVRTMVWSHNESWMVTGDHAGYVKYWQSNMNNVKMFQ
AHKEAIRGLRYTIHHTSPYVSCATVADDPSILAVVRILDVTLILFLFWFCAVSGRAIVVLVWVHSPTDHKLATCSDDGTV
RIWDFLRCHEERILRGHGADVKCVHWHPQKSLVISGSKDNQQPVKLWDPKTGQSLATLHAHKSTVMDVKWNENGNWLVTA
SRDHLLKLFDLRNLSQEVQTFRGHKKEASSVAWHPSHEGLFCSGGSDGAILFWHVGADKEVGAIEQAHDSIVWTLAWHPL
GHILCSGSNDHTSKFWTRNRPGDLMRDKYNLNTLPAGSAGIDDHEIADEAAVIPGMGPEDRINADGESEDKSGGIPGLDL
DHAVDEGKKFANKKVPYSKPIPRNFQAQWNEMEAEDSEQVEALNAFVNQLIETTPGAVPLNEVTPNAIILYGKMIPVEAG
SKLAEAISKGTDAINKLVFSGEIEELRDVVGPPDNVNEAEEYLQDDGEIDYSKVPDVDLPPPLPSSKFAQNPELLKSLNR
GGKRKFDQLIGWSDGGSSDRTSKIHQPVFGGVITEDSQSSDTDLRFSIGKNAESNSFHSGQDEDHRRIGSHGDIARSSNR
GDEDLRFNISAGPGRPGSRNEYDPRGNSFADKDFRSISGFPKKSMDNDVYDERERDGAGGRWDDEKSKGDGPRGKSDGNG
FDKRDNGMPMGPGGMGIGHMPGVPHLPNHHNMQNINPNMPPSIPGLMPHPNMPQHPGMQGKPPPPHPGMPGMDGPMLPHM
MPHHPGMHPVFGPNGPPPGGFGPNFRLPPPNGNFGPNHFRPGPMPPFGPNQGPPPFGNSFQGPPNFRGPNAGPMNFDRPV
FGPNFRGQNPQGPLNNFNANFGNFGKNGPNRGMSRGGGGGGSGSGGDNRSGYSNRGRGRDNDQSRGSRGRDNY
Swiss-Protpre-mRNA 3' end processing protein WDR33
KEGG     K15542  PFS2; polyadenylation factor subunit 2     
SUPERFAMILYSSF50978  WD40 repeat-like superfamily     
Gene3DG3DSA:2.130.10.10     
PfamPF00400  WD40; WD domain, G-beta repeat     
SMARTSM00320     
ProSiteProfilesPS50294  WD_REPEATS_REGION; Trp-Asp (WD) repeats circular profile.     
ProSitePatternsPS00678  WD_REPEATS_1; Trp-Asp (WD) repeats signature.     

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