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Gene detail [Fasta]

Species Bombyx mori
GeneBGIBMGA000629
Positionnscaf1690:1216753..1231482[GBrowse]
SilkDBhttp://www.silkdb.org/cgi-bin/gbrowse/silkdb/?name=BGIBMGA000629
sequence mRNA: 
>BGIBMGA000629-TA
ATGTCTAGTAATCCTCAGTGGAAAATGTTCCAACCGCCAGATTCACACTCATCTCCCCTGCAAGATATTTTAGATCTCCA
GCACTCCAACATGCAGCACAAATCTTCGTATCGTAATGGTGACCCTGTGGAATTTGAAATGACTTATGATCGTCGAACAG
GCAAACCAATTGCATCAACAGTCACTAAAATTGCACCGGAAGTGGTATTAAGCGAAGCTAGAGTCACAGGCACTGTAACA
ACAGAAGTAAAAGGTGAAGGATCTGGTGATAATACAGGTAGAATATCCTATGAAACTCGTGGAGAATGTTTCTTCTTGCC
CTATACAAAAGATGATGTTGAAGGGAATGTCACTTTACGCACTGGAGATGCTGTCAGCTTTCAAATTGCAACTAATCAAA
GAGGAACATTAGGTGCTTGTCATATACGTTTTGAGAACCCCGTACATCCAGTTAAATATCATGGAGTTGTCTGCTCCATG
AAAGAAAATTTTGGTTTTATTGAACGTGCCGATGTTGTAAAAGAGATATTCTTTCATTTTTCTGAAACTAAATGTAAAGA
AGAATTGACTCTCGGTGATGATGTCGAGTTTATTATACAAACTAGAAATGGCAAAGAAGTGGCATGTAACATTACTAAGT
TACCAAGTGGTTCAGTTGTGTTTGAAGATGTAAGTCCTGAAATAATGCGTGGTCAGGTGTTGAAGCCTTTGGAACGCGGT
AACTTGGTGCGTGCAACACAGAACGATCCTCTCCCTGGGCGCATCCGATACCGTGCTGCAGATCATTCTGAAGTTGAGGT
CCCCTTTGGAGATAAAGACCAGTGTGGTGAGTTTACGCTCCGACACGGAGATTGGGTGCAGTTTCAAGTTGCAACCGATC
GTCGTGATCAGCTCAAGCGCGCCACTAATATTTCTCTCCTCGATGAATCTTTTTATGTATCTGGCGAACGGCGGGAGCAA
GGCCTCGTGTGCTCTCTGCGGGAAGGGTTCGGATTCATCCGTTGCGTGGAAAGAGAACAGACTATGTTCTTTCATTTCGC
CGAGGTTCTTCGCTTAGGACAAGATCTCACCGTTGGAGATGAGGTGGAGTTTACCGTTGACCATTTATCGACATTCTCGA
ACATGAACACGCGGCAATCAGCTATTCGCATCAAGCATCTCTCGCCGGGCACGGTTCAGTTCGAGACTCTGATCGAGCGC
GGCGTCAGAGGTGTTGTGACCAAGGAAGCTCAAGTGTACAACAACACCGGCAGTCCGACCCGACAGCCTCCACCGGATAC
AAATGGACTAATCTCTTGTCAGATTAATCAGACTAAGAAATCTCTGCCTTTTATGGCCAAAAAATGCGAATCAAAAATGC
TACCCCGTGTTGGAGACAAGGTCACCTTCGACTTATACCAGGTTAAACGCACAAAGGAGCTTGTAGCGATGTCAGTACAA
GTCCAACACAGTCTTACAAACGGCAACTCGAGTAATGGAAACGGCAGCCGTCCCATCATGCAAGGTTTCATAGCTGCTCT
GAAAGATGGATTTGGTTTTATTGAAACATCAGATCACACCAAAGAAGTGTTTTTCCACTTCAGTAATTTGGAAGGTAGCC
CGGAAAATTTGGAATTGGGCATCGAAGTCGAGTATAGTTTGGGTCGCCTGAACGGCTCTGGCGGGGGCTGTGCAAGCGCT
GAATACGTCCGTGTTTTGGCTCGAGGTACTATACCTATTGCGAAGCCGCTAGAACCAACTCTAAATGGAACTGTGACGAG
AACCTTACGGGCTCTGAACCCTGATCAAGCCCAATATTCCGGTTTGATTCAAGTGGAAGGTGGGACAAGCTATGAGTTTG
GCATTATGGGATTATCATGCAAGCGTGAGATTCTGCAGGTTGGTGATCCAGTAACTTTTCAAGCTGACATAGAGGGACGG
GCCAGTAACATAGTGCCAATTAGAAAGAAGCGACGTGCCATTGTTGACGCCATAAAAGGTGTTTTTGGCTTTTTGTCTGT
CGACGGCGAAGATACTCGTCGTTTGTTCTTCCACATGTCTGAGGTTCGAGGTAATCCCTCCGAGTTGCAGTCGGGGGATA
CTGTTGAGTTCGTGATGCTTACTAATCCTCGTAATGGGAAGTCTTCTGCTTGCAATGTCGTTAAAATAGCGAGCAAGGGT
AAAGTGAGAAGTGAACGTCCAGAGCGGCTTCTCTCTCGGCTCCGGACGGCTTCGTTGGAGGAGTCGGCAGGGCCTCGAGT
GATTGCTGTGCGCACTCCACGCGGCCCCGACGGATCGAGAGGCTTCCGTCCGCGTCGTCCCATCGCAGGTCAAATACTAA
TGACATTTTAA
PEP: 
>BGIBMGA000629-PA
MSSNPQWKMFQPPDSHSSPLQDILDLQHSNMQHKSSYRNGDPVEFEMTYDRRTGKPIASTVTKIAPEVVLSEARVTGTVT
TEVKGEGSGDNTGRISYETRGECFFLPYTKDDVEGNVTLRTGDAVSFQIATNQRGTLGACHIRFENPVHPVKYHGVVCSM
KENFGFIERADVVKEIFFHFSETKCKEELTLGDDVEFIIQTRNGKEVACNITKLPSGSVVFEDVSPEIMRGQVLKPLERG
NLVRATQNDPLPGRIRYRAADHSEVEVPFGDKDQCGEFTLRHGDWVQFQVATDRRDQLKRATNISLLDESFYVSGERREQ
GLVCSLREGFGFIRCVEREQTMFFHFAEVLRLGQDLTVGDEVEFTVDHLSTFSNMNTRQSAIRIKHLSPGTVQFETLIER
GVRGVVTKEAQVYNNTGSPTRQPPPDTNGLISCQINQTKKSLPFMAKKCESKMLPRVGDKVTFDLYQVKRTKELVAMSVQ
VQHSLTNGNSSNGNGSRPIMQGFIAALKDGFGFIETSDHTKEVFFHFSNLEGSPENLELGIEVEYSLGRLNGSGGGCASA
EYVRVLARGTIPIAKPLEPTLNGTVTRTLRALNPDQAQYSGLIQVEGGTSYEFGIMGLSCKREILQVGDPVTFQADIEGR
ASNIVPIRKKRRAIVDAIKGVFGFLSVDGEDTRRLFFHMSEVRGNPSELQSGDTVEFVMLTNPRNGKSSACNVVKIASKG
KVRSERPERLLSRLRTASLEESAGPRVIAVRTPRGPDGSRGFRPRRPIAGQILMTF
Swiss-ProtCold shock domain-containing protein E1
SUPERFAMILYSSF50249  Nucleic acid-binding proteins superfamily     
Gene3DG3DSA:2.40.50.140     
PfamPF00313  CSD; 'Cold-shock' DNA-binding domain     
SMARTSM00357     
ProSitePatternsPS00352  COLD_SHOCK; 'Cold-shock' domain signature.     
OrthologiGroup-00655    Cold shock domain-containing protein E1      

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