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Gene detail [Fasta]

Species Bombyx mori
GeneBGIBMGA003497
Positionnscaf2674:5115219..5144061[GBrowse]
SilkDBhttp://www.silkdb.org/cgi-bin/gbrowse/silkdb/?name=BGIBMGA003497
sequence mRNA:
>BGIBMGA003497-TA
ATGAGTGGAAAATATGGAGCGACGGATGTTAATGGAACAACCTGTGATATTCAAGAAGAAATCGTCGTAGATAATGAAGT
TGATTCGAGTGCATCGTACAAGAGAAGATGGTGGCGTGTCAGTCAGAACGTGCTTTACGGACTAGGGCATGTTTACAACG
ACCTCTGCGCTGCGATGTGGTTCTCATACATGCTGCTTTTCTTTCAAGCAGTCCTGGACATGAGAGCTGTCGTAGCTGGA
GCTATGCTGCTTCTAGGACAAGTTGTAGATGCACTTGCAACCCCTGTTGTGGGAGTTTTGGCTGATAAATACGGAACTAA
GAAGGCATGGCATTTGACTGGATGCATTTTAGTAACAGCGACATTCCCGTTGCTGTTCATTAGATGTTGGGGTTGCTGGT
TTAATGAAAACACACAGTATTTGTACTGGTGGATGCCACTATATTATGCGGTCCTAATTATATTTTTCCAAATTGGTTGG
GCCGTGGTACAAATCTCACATCTGGCTATGATTCCGTCAATCACCGACAACCTTCAAGTTCGTGCCGAATTGACTTCTAT
TAGGTATATGGCTTCTGTGATGTCGAGTCTCACTGTTTACCTGATAACTTGGGTTGTTTTGAGGGCAACAACCTACAGTA
CATTCATCAGCCAAACAGATGATTACAAATTTCGGGACGTCTCCTTGATAATTTCTGGTTTGGGAGTAATATCTTTCATG
GCCTTTCATTTATTTTTCAAACTTCGAAGAGAAGATAAATCTGGCAAAGGAGCACCCGTTGTCCAGAACGGTAATGGAAC
TTTCGTCCACCAAGACAACGAAGCAGCGAAATTACCCGCTAAATCTAAAATTATGTACTTCCTGCGAATGCCGTTGTTAT
ATCAGACCAGTTTATTATATGTATTTTCTCGTCTGTATTGGGCATTGAGTCTTGTGTACGTGCCATTGTTCTTGGAGGAA
CGTTTATCTGTGAACCCGAGTGCAGGATCAGAGCTAGTTGCGAGTGTACCTCTTGTGCTTTACATTTCATCGTTCTTTTT
CTCGCTACTACTCAAGAGCAAGATTAACAGTTTTGGCAACCAGGTGGTGTATTTCATTGGGAGTTGCTTAAGCTTAGGAA
GCTGCCTGTGGATTGCATTAGCCATAGATCCGGAAGCGAGCATAGTTCAAATCTACATGGTCGCAACACTCATTGGGGCA
GGAAGCTCAATCACGCTCGTCTCCAGCCTATGTGTCACAGCAGATCTCATAGGGCCGCACTCACACCAAAGTGCTGCCAT
CTATTCTATAGTGACATTTGCAGACAAACTTGTTACGGGTATAGCTGTCGTCGCTATTCAGAACTATAAATGCGATGATG
TTGTGGATTGTCCTCAATATTATCGAGGGGTGCTCACGTACGCATGCGGCGGAAGTGCCGCACTTGGCATATTGTCTTTG
TCTCTCACTAAACTAATTTCAATCAAAACTAAACCAGAGAAGGGTTCCATAAATGAATCTGAAAGTGATTCCACAAGTGA
AAAAGGAGATAAAAGTGACTCCAGCGAATCAGGCTCTGGAAGCGAAAGTGAAAGTGGCTCTAGTTCCTCAGGTTCAGGAT
CACACAGATCTGCATCAGAAAAATCTGGTGTAGGGGGTTCACATCATAGTGATGATAGCAAAACATCACATAACTATGAT
AATGCGAATTCATCAAAATCTGACCATCATACTGATAAAAATAGTTCTGATGAAGACTCAGCACCAAAGTCTAGATCTAG
AAATAGCCATAGCAAAGTAAAATCTGATCTTTGGGAAGAAAATCCAGATATATATGGAATCAGAAGATCAGCACGGCCAA
GAAAAGAGCCAGATAGATTAAAATTAGCAGATAGTGATTCTAGTGAAAGAGATAGAACTCACAGTCGGAAAAGTAGAAAA
AAAAGCAACTCATGGAATTCTGATACATCAGAAAGTGACAGTGAAATAGGGGGCTCTCCACCACCACCATCAAAGAGACC
TGGCCAAAGAAGTCTACCTCTGAGGAAAAAGAAACCGAGTAGGAGAAGAAGGTATTCTAGTGACGAAGAAGAGAGTTCAG
AGGGTACAGATGATGAAAGCAAGAGTCGAACAACAACAAGACGTACAGGCGCAGCAGTTAGTTATAAAGAAGCAAGTGAT
GAACAAACTGATTCTTCTGATCTTTTGGAGGTGGAAGGTGTGGAAGGAGATGGTGAAGCTGAGCCAGAACCTGAGGATCA
TAGTGAGACAATAGAACGAGTTCTGGGAATGCGACGAGGGAAAAAAGGAGTCACTGGCAATGTGACCACCATTTATTATA
TAGAAGAACATGGAGACCCTAATGAAGGTTGTGACCCTAATGATGAAGACTCTACTGAACCTCAATACCTGATAAAGTGG
AAAGGATGGTCACATATTCACAACACATGGGAATCTGAAAAGACAATTAATGATCAAAAAGTTAAAGGCTTAAAGAAACT
GGAAAACTTTATTAAGAAAGAAGTAGAAATCTCATGGTGGAGACAGCAAGCTGGACCTGAGGATATAGATTACTATGAGT
GTCAGTCTGAACTACAGCAAGAATTAGTTAAAACCTACAATAACGTTGAAAGGATAATAGCTGAACAAAATCGTGAGCTA
GAAGGTGGTGGAACTGCTCATGAATATTTTTGCAAATGGGAATCTCTTCCATATGCTGATGCAACATGGGAAGATGCAGT
TTTAATAGAGAAAAGATGGCCTGTTGAGGTGGAGCACTTTAAAAGTCGAGAAGCTGCTAAAAGTACTCCATCTAGGCATT
GCCCTGTATTGAAAAGGCGACCCAAGTTTCATCAGATAAAAGAACAACCTGAATACGTGGGAAAAGATTCAAGTTACCAC
TTGAGAGATTATCAAATGGATGGATTGAATTGGTTAATTCACTCATGGTGTAAAGACAATTCAGTAATTTTAGCAGATGA
AATGGGCCTAGGCAAAACGATACAGACAATTTGTTTTTTATACTATCTCTTCAAGTCGCAACATCTGTATGGACCATTTC
TTTGTGTAGTGCCTCTGAGTACAATGACTGCCTGGCAAAGGGAATTTCAGCAGTGGGCACCCGACATTAATGTTGTTACT
TATATTGGTGATGTTAGTAGCAGAGATATAATTAGGCAGTTTGAGTGGAGCTTTTCTAGCTCAAAAAGACTGAAATTTAA
CGCAATATTAACCACATATGAGATTTTGTTAAAAGACAGACAGTTTTTAAGGTCTTTTAGTTGGGCTTGCTTGCTTGTAG
ATGAGGCTCATAGGTTAAAAAACGATGACTCTCTACTATATAAGGCCTTAAAAGAATTTGATACCAATCATAGATTATTA
GTTACTGGTACACCTTTACAAAACTCACTGAAAGAATTGTGGGCCCTTTTACATTTTATAATGCCTTACAAGTTTGAGTC
TTGGGAAGACTTTGAAAAAGATCATGAAGATGCTGCTACCAAAGGATACGAAAAATTACACAAACAGTTAGAACCGTTTA
TATTAAGGAGGCAGAAAAAAGATGTAGAAAAATCATTACCTGCCAAAAAACTTCTTAGGGGCTCAGGAAAATTACTTTTG
CTAGATAAACTGCTGTGCAGGTTAAAGGAGACTGGTCATAGGGTTTTAATCTTTTCTCAAATGGTCCGAATGTTAGACAT
TTTAGCAGAATATTTACAAAGGAGACATTTTCCTTTTCAACGTCTTGATGGAAGCATTAAAGGTGAATTGAGAAAACAAG
CACTTGATCATTTTAACGCTGAAGGTTCGCAAGACTTCTGTTTTTTGTTGTCTACTCGTGCTGGTGGGTTAGGTATTAAC
CTTGCCACTGCAGATACTGTGATAATATTTGACTCAGACTGGAATCCTCAAAATGATTTGCAAGCACAAGCACGAGCACA
TCGTATTGGTCAAAAAAATCAGGTTAATATTTATAGGTTAGTGACTGCAAGGTCTGTTGAAGAAGATATTGTAGAGAGAG
CAAAAAGAAAAATGGTTTTAGACCACCTGTGTGACATTGATGAAATTTTGCAAAGGGCTGAAACCCGGGATGAAGGTCCT
GCAATGGTGGGTGATGAGTTACTGTCAGCTTTTAAGGTGGCTAGTTTTACTTTTGATGAAGAGAAAGCTGTCAATGAACT
GAAGAAAGATAATGCTGATGAAGAACCTAAAGACTGGGATGACATCATCCCTGAAAATGTTCGGAAAACAATAGCAGAAG
CAGAAAAATTAAAAGAAATGGAAGATATTTATTTGCCACCTCGAAGAAAAAATCAACTACAAAATAATGCTGATGGTGGT
AGAAGACGTCGCGGTCGTTCTGGTGATGGTGGCGATGGCGATGGTGTTGATGGTGACGGTGAGGCTGAAAGCGATGCATC
TGATGGTGAAGCCAGTGCTGATGATGATCGACCGAGAAAAAGAGGTCGTCCTCCTGCTTCACATCGGGAGAAAATCAAAG
GCTTCACAGATCAAGAGATAAGACGTTTTGTGAAAAGCTATAAGAAATTTTCCGCGCCACTGAAGCATCTCGACAGTATA
GCGTGTGATGCCGAATTACAAGAAAAACCATTAGCTGAGCTAAAAAGACTGGGTGAAATACTGCAGGAAAGATGTAAAGC
TGTACTTAGTGAGACAGCAGAACCAAGTGAACAAAATGAAGGCCGTAAAAACAACAGGAAGACATTTAAACTCGGAGGAG
TACCTGTAAATGCGAAAACCCTAGCTGCATGTCAAGATGAGTTGGCAGCTTTGGATGACTTTCTGCCACAAACTAAAGAA
GAACGTCTCAAGTGGCAACTAGATTTTAGGACGAGACCAGCGAATTTTGATGTTGAGTGGAATGTCTCGGACGATTCAAA
ATTACTAGCAGGAATATACCAATATGGTCTGGGATCATGGGAAGCAATAAAAATGGATTCTTCTTTCGAAATAGGAGATA
AAATATTAACGAATGAGGATAAAAAACCTCAAGCAAAACACCTACAGTCGCGAGCAGAGTACTTATTAAAGCTTATTAAA
AAGTTACTGGATCAAAAGAATGGAAAACAAAAAATGAAAAAACCTCGACCGAAGAGGGCAAATAAAGAACCGGTCACCAA
AGATATTGTCGAAGATGACGGTAGCTCAGCTGAAGATAAAAAAACTAAAGGTGTTAAAAATGATAAAACTGAAAAGGGTA
AATTAAAAATTGAAGAAGTTTCTACACATGATGAAACTTCTAACGATAAGAAAGAAAAAGACAAAAAACGTAAAAAAGAC
GAAGACCGCAAGGGTGACAAATTAAAGGACGGAAGAAACCACGACAAAGAGGAAATGAAGGAATACCAGTGCAAAGAAAA
AATGAGACCAGTTAAAAAGGCTCTAAAGGCTCTCGACAATCCAGACCAATCTTTATCGGAAACTGAACAAGTGTCAAGAA
CCAGGGCCTGCCTCACCCAGATAGGTACTCAAATAGATTTGTGTGTTGAAGCATATCCAGATTCTCAAAAAGTAGAATGG
AGAAGTAATCTCTGGTACTTCGTTTCAAAATTCACTAACTTTGATGCAAAGCAGTTGTACAAGTTGTACAAGTATGGCCT
AAAGAAAAATGAAGCTTCAAAGCAAAAAGATGGGAAGCATAAAGAAAATGTCAAGACAAATAATCGTAATAATCATAACT
CCATAAACCACTTAAAATCATTCAAGAAAAATTCAAATTCAAAGCAAAAAAGTGATACAAATGATAAAAAAGAAAAGAAA
ATGAAGCTAGAAAAGGAGAAAACTGATAAGCACGATAAAAACCAGCATACATCAGGGGTCAAGAGAAAACTAGAAGATGG
AGAATGTGACCCAGAACCCAATGATAATAAACGCCACGAAAGAACTAAACGCAGAGACAAGGATCGCAAGTATAAAGATG
GGGACTTGAAGCAAGACGATTTGATGTACAGAGAACGGAGTCGGTCGGAACGAGAGAGGGATCGTGATCGAGAAAGGGAC
AGGGATCGTGACCGAGAACGCGATCGAGATCGCGAAAGGGACCGAGACCGTTCGCGGACACGGCGGGACAGCGGCGGCGC
GGGGGGGCCGCGGGCTCGGCCTTATGTGGCACAGCACGCGCACGTCGAGCACCCCTCGCACCCTGCACACCCCGCCTGGA
CCCCGCCGCCCTATCCCGGGCCCCGACAGTACCGCGGAGACCGCAATCAGAGACAACACGATAAAAGAAGTAGGTATGGA
TTCAGTGGCATGGCAGGTCCATACGGTGGCTATTATGATAGCACAACAACCATGGCTAGTGGTATGGGTTTTCCGCCTGT
GAGGCCTTACGCAGACGACTGGAGAGGATATTCACAGCCTGAATATGGCTACGATGATCGGGAGTACGAGCGTGAAGTTT
ATAGAAGAGATTACGATAGACGCGCACCACCAACATGA
PEP:
>BGIBMGA003497-PA
MSGKYGATDVNGTTCDIQEEIVVDNEVDSSASYKRRWWRVSQNVLYGLGHVYNDLCAAMWFSYMLLFFQAVLDMRAVVAG
AMLLLGQVVDALATPVVGVLADKYGTKKAWHLTGCILVTATFPLLFIRCWGCWFNENTQYLYWWMPLYYAVLIIFFQIGW
AVVQISHLAMIPSITDNLQVRAELTSIRYMASVMSSLTVYLITWVVLRATTYSTFISQTDDYKFRDVSLIISGLGVISFM
AFHLFFKLRREDKSGKGAPVVQNGNGTFVHQDNEAAKLPAKSKIMYFLRMPLLYQTSLLYVFSRLYWALSLVYVPLFLEE
RLSVNPSAGSELVASVPLVLYISSFFFSLLLKSKINSFGNQVVYFIGSCLSLGSCLWIALAIDPEASIVQIYMVATLIGA
GSSITLVSSLCVTADLIGPHSHQSAAIYSIVTFADKLVTGIAVVAIQNYKCDDVVDCPQYYRGVLTYACGGSAALGILSL
SLTKLISIKTKPEKGSINESESDSTSEKGDKSDSSESGSGSESESGSSSSGSGSHRSASEKSGVGGSHHSDDSKTSHNYD
NANSSKSDHHTDKNSSDEDSAPKSRSRNSHSKVKSDLWEENPDIYGIRRSARPRKEPDRLKLADSDSSERDRTHSRKSRK
KSNSWNSDTSESDSEIGGSPPPPSKRPGQRSLPLRKKKPSRRRRYSSDEEESSEGTDDESKSRTTTRRTGAAVSYKEASD
EQTDSSDLLEVEGVEGDGEAEPEPEDHSETIERVLGMRRGKKGVTGNVTTIYYIEEHGDPNEGCDPNDEDSTEPQYLIKW
KGWSHIHNTWESEKTINDQKVKGLKKLENFIKKEVEISWWRQQAGPEDIDYYECQSELQQELVKTYNNVERIIAEQNREL
EGGGTAHEYFCKWESLPYADATWEDAVLIEKRWPVEVEHFKSREAAKSTPSRHCPVLKRRPKFHQIKEQPEYVGKDSSYH
LRDYQMDGLNWLIHSWCKDNSVILADEMGLGKTIQTICFLYYLFKSQHLYGPFLCVVPLSTMTAWQREFQQWAPDINVVT
YIGDVSSRDIIRQFEWSFSSSKRLKFNAILTTYEILLKDRQFLRSFSWACLLVDEAHRLKNDDSLLYKALKEFDTNHRLL
VTGTPLQNSLKELWALLHFIMPYKFESWEDFEKDHEDAATKGYEKLHKQLEPFILRRQKKDVEKSLPAKKLLRGSGKLLL
LDKLLCRLKETGHRVLIFSQMVRMLDILAEYLQRRHFPFQRLDGSIKGELRKQALDHFNAEGSQDFCFLLSTRAGGLGIN
LATADTVIIFDSDWNPQNDLQAQARAHRIGQKNQVNIYRLVTARSVEEDIVERAKRKMVLDHLCDIDEILQRAETRDEGP
AMVGDELLSAFKVASFTFDEEKAVNELKKDNADEEPKDWDDIIPENVRKTIAEAEKLKEMEDIYLPPRRKNQLQNNADGG
RRRRGRSGDGGDGDGVDGDGEAESDASDGEASADDDRPRKRGRPPASHREKIKGFTDQEIRRFVKSYKKFSAPLKHLDSI
ACDAELQEKPLAELKRLGEILQERCKAVLSETAEPSEQNEGRKNNRKTFKLGGVPVNAKTLAACQDELAALDDFLPQTKE
ERLKWQLDFRTRPANFDVEWNVSDDSKLLAGIYQYGLGSWEAIKMDSSFEIGDKILTNEDKKPQAKHLQSRAEYLLKLIK
KLLDQKNGKQKMKKPRPKRANKEPVTKDIVEDDGSSAEDKKTKGVKNDKTEKGKLKIEEVSTHDETSNDKKEKDKKRKKD
EDRKGDKLKDGRNHDKEEMKEYQCKEKMRPVKKALKALDNPDQSLSETEQVSRTRACLTQIGTQIDLCVEAYPDSQKVEW
RSNLWYFVSKFTNFDAKQLYKLYKYGLKKNEASKQKDGKHKENVKTNNRNNHNSINHLKSFKKNSNSKQKSDTNDKKEKK
MKLEKEKTDKHDKNQHTSGVKRKLEDGECDPEPNDNKRHERTKRRDKDRKYKDGDLKQDDLMYRERSRSERERDRDRERD
RDRDRERDRDRERDRDRSRTRRDSGGAGGPRARPYVAQHAHVEHPSHPAHPAWTPPPYPGPRQYRGDRNQRQHDKRSRYG
FSGMAGPYGGYYDSTTTMASGMGFPPVRPYADDWRGYSQPEYGYDDREYEREVYRRDYDRRAPPT
Swiss-ProtChromodomain-helicase-DNA-binding protein 1
KEGG     K11367     
SUPERFAMILYSSF54160  Chromo domain-like superfamily     
Gene3DG3DSA:2.40.50.40     
PfamPF13907  DUF4208; Domain of unknown function (DUF4208)     
SMARTSM00490     
ProSiteProfilesPS51194  HELICASE_CTER; Superfamilies 1 and 2 helicase C-terminal domain profile.     
CoilsCoil
ProSitePatternsPS00598  CHROMO_1; Chromo domain signature.     

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